New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5557381	42 (0.710)	3 (0.050)	3/244	NT	6.1%	coding (249/1935 nt)	PP_4888	methyl‑accepting chemotaxis transducer
	?	NC_002947	= 5557420	53 (0.950)					coding (210/1935 nt)	PP_4888	methyl‑accepting chemotaxis transducer

AGCAGCTCGGCCATGTCGTTGGCGGAATCCTTGAGGTTCTTTTCCAGGGTGCTGCGTAGTTGCTGCTGCTCGCTTTGCAGGCGCTCCGACAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCGGTGACCGTGCTTCGGGTGAGCGCAACGGCAACCAGCACCTGCACCAAAAGAGCGAT  >  NC_002947/5557280‑5557566                                                                                                                                             |                                                                                                                                                    agcagcTCGGCCATGTCGTTGGCGGAATCCTTGAGGTTCTTTTCCAGGGTGCTGCGTAGTTGCTGCTGCTCGCTTTGCAGGCGCTCCGACAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑Gcac                                                                                                                                            <  1:233838/149‑1 (MQ=255)                   ttGGCGGAATCCTTGAGGTTCTTTTCCAGGGTGCTGCGTAGTTGCTGCTGCTCGCTTTGCAGGCGCTCCGACAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTc                                                                                                                          >  6:94674/1‑149 (MQ=255)                              cTTGAGGTTCTTTTCCAGGGTGCTGCGTAGTTGCTGCTGCTCGCTTTGCAGGCGCTCCGACAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGCGGCACATCTTGCCCGGCTTGCTCCAGATCGCtt                                                                                                                <  1:43894/149‑1 (MQ=255)                               ttGAGGTTCTTTTCCAGGGTGCTGCATAGTTGCTGCTGCTCGCTTTGCAGGCGCTCCGACAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGc                                                                                                              >  6:157810/1‑149 (MQ=255)                                 gAGGTTCTTTTCCAGGGTGCTGCGTAGTTGCTGCTGCTCGCTTTGCAGGCGCTCCGACAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGc                                                                                                              >  1:175713/1‑147 (MQ=255)                                 gAGGTTCTTTTCCAGGGTGCTGCGTAGTTGCTGCTGCTCGCTTTGCAGGCGCTCCGACAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGa                                                                                                            >  8:299990/1‑149 (MQ=255)                                  aGGTTCTTTTCCAGGGTGCTGCGTAGTTGCTGCTGCTCGCTTTGCAGGCGCTCCGACAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGa                                                                                                            <  1:347390/148‑1 (MQ=255)                                    gTTCTTTTCCAGGGTGCTGCGTAGTTGCTGCTGCTCGCTTTGCAGGCGCTCCGACAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAg                                                                                                                       >  4:193521/1‑135 (MQ=255)                                    gTTCTTTTCCAGGGTGCTGCGTAGTTGCTGCTGCTCGCTTTGCAGGCGCTCCGACAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAg                                                                                                                       <  3:193521/135‑1 (MQ=255)                                     ttCTTTTCCAGGGTGCTGCGTAGTTGCTGCTGCTCGCTCTGCAGGCGCTCCGACAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTg                                                                                                        >  3:227583/1‑149 (MQ=255)                                            ccAGGGTGCTGCGTAGTTACTGCTGCTCGCTTTGCAGGCGCTCCGACAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGc                                                                                                                            >  2:132806/1‑122 (MQ=255)                                                     tgcGTAGTTGCTGCTGCTCGCTTTGCAGGCGCTCCGACAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTAcc                                                                                         >  5:379907/1‑148 (MQ=255)                                                               ctgctgctCGCTTTGCAGGCGCTCCGACAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCg                                                                               <  7:299990/148‑1 (MQ=255)                                                               ctgctgctCGCTTTGCAGGCGCTCCGACAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGc                                                                              >  8:228637/1‑149 (MQ=255)                                                                tgctgctCGCTTTGCAGGCGCTCCGACAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGc                                                                              >  8:124024/1‑148 (MQ=255)                                                                        gCTTTGCAGGCGCTCCGACAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCgg                                                                     >  6:6757/1‑149 (MQ=255)                                                                        gCTTTGCAGGCGCTCCGACAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCgg                                                                     >  3:183404/1‑149 (MQ=255)                                                                        gCTTTGCAGGCGCTCCGACAACCCTGAGCTCAGGCGCTGGAGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTTCGAGTTGGCGGCTGTCATTACACAGCCGTTAGACAAGGTCgg                                                                     >  2:284166/1‑149 (MQ=255)                                                                         cTTTGCAGGCGCTCCGACAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGc                                                                    <  4:183404/149‑1 (MQ=255)                                                                            tGCAGGCGCTCCGACAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCATGGAGTGATCCTGTTCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGcc                                                                   <  5:258908/147‑1 (MQ=255)                                                                              cAGGCGCTCCGACAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTcc                                                                <  5:157810/148‑1 (MQ=255)                                                                              cAGGCGCTCCGACAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCa                                                               <  2:175713/149‑1 (MQ=255)                                                                                   gcTCCGACAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCg                                                          >  5:253826/1‑149 (MQ=255)                                                                                   gcTCCGACAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCg                                                          <  4:209856/149‑1 (MQ=255)                                                                                      ccGACAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCg                                                                      <  8:343681/134‑1 (MQ=255)                                                                                      ccGACAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCg                                                                      >  7:343681/1‑134 (MQ=255)                                                                                         aCAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCg                                                                               <  5:13286/122‑1 (MQ=255)                                                                                         aCAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCg                                                                               >  6:13286/1‑122 (MQ=255)                                                                                          cAAGCCTGCGCTCAGGCGCTGGCGGGTACTTCTTGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCGGTGAcc                                                    <  2:330663/148‑1 (MQ=255)                                                                                            aCCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCGGTGACCGTg                                                 <  6:379907/149‑1 (MQ=255)                                                                                            aCCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCGGTGACCGTg                                                 <  5:94674/149‑1 (MQ=255)                                                                                              ccTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAgagcgcagggttgtcggagcgcctgcaaagcgagcagcagcaactacgcagcaccctggaaaagaacctcaaggattcc                                                                      >  4:370605‑M2/1‑48 (MQ=255)                                                                                              ccTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAgagcgcagggttgtcggagcgcctgcaaagcgagcagcagcaactacgcagcaccctggaaaagaacctcaaggattcc                                                                      <  3:370605‑M2/127‑80 (MQ=255)                                                                                                tGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAgagcgcagggttgtcggagcgcctgcaaagcgagcagcagcaactacgcagcaccctggaaaagaacctcaaggattccgccaacgacatggccgagctgctg                                              <  5:296110‑M2/149‑104 (MQ=255)                                                                                                tGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCGGTGACCGTGCTTc                                             >  3:193666/1‑149 (MQ=255)                                                                                                   gcgcAGGCGCTGGCGGGTACTCCTGGACAGGCCGTCTAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCGGTGACCGTGCTTCggg                                          <  8:327615/146‑1 (MQ=255)                                                                                                     tCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCGGTGACCGTGCTTCGGGt                                         >  5:311644/1‑148 (MQ=255)                                                                                                     tCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCGGTGACCGTGCTTCGGGt                                         >  4:130658/1‑148 (MQ=255)                                                                                                      cAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCGGTGACCGTGCTTCGGGTGa                                       <  7:228637/149‑1 (MQ=255)                                                                                                       aGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCGGTGACCGTGCTTCGGGTGa                                       <  5:91547/148‑1 (MQ=255)                                                                                                       aGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCGGTGACCGTGCTTCGGGTGa                                       <  6:311644/148‑1 (MQ=255)                                                                                                       aGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCGGTGACCGTGCTTCGGGTGAg                                      >  5:240975/1‑149 (MQ=255)                                                                                                               gCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCGGTGACCGTGCTTCGGGTGAGCGCAACg                               >  4:110342/1‑148 (MQ=255)                                                                                                                    tACTGCTGGACAGGCAGTCGAGCCCATAGC‑GCACATCTTCCCCGTCTAGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCGGTGACCGTGCTTCGGGTGAGCGCAACGGCAAcc                         <  1:284166/149‑1 (MQ=255)                                                                                                                      ctgctgGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCGGTGACCGTGCTTCGGGTGAGCGCAACGGCAACCa                        <  6:253826/148‑1 (MQ=255)                                                                                                                       tgctgGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCGGTTCGCCAAGGCCGGCCTCCAGGGCGGTGACCGTCCTTCGGGTGAGCGCAACGGCAACCAg                       >  7:198560/1‑148 (MQ=255)                                                                                                                         ctgGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCGGTGACCGTGCTTCGGGTGAGCGCAACGGCAAcc                         >  2:51728/1‑144 (MQ=255)                                                                                                                         ctgGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCGGTGACCGTGCTTCGGGTGAGCGCAACGGCAAcc                         <  1:51728/144‑1 (MQ=255)                                                                                                                         ctgGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCGGTGACCGTGCTTCGGGTGAGCGCAACGGCAACCAGCAc                    <  4:193666/149‑1 (MQ=255)                                                                                                                          tgGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTc                                                                                               >  6:200043/1‑73 (MQ=255)                                                                                                                          tgGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTc                                                                                               <  5:200043/73‑1 (MQ=255)                                                                                                                            gACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCGGTGACCGTGCTTCGGGTGAGCGCAACGGCAACCAGCACCTg                 >  2:320722/1‑149 (MQ=255)                                                                                                                            gACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCGGTGACCGTGCTTCGGGTGAGCGCAACGGCAACCAGCACCTg                 >  5:186635/1‑149 (MQ=255)                                                                                                                                  ccGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCGGTGACCGTGCTTCGGGTGAGCGCAACGGCAACCAGCCCCTGCACCa            >  5:350538/1‑148 (MQ=255)                                                                                                                                    gTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCGGTGACCGTGCTTCGGGTGAGCGCAACGGCAACCAGCACCTGCACCaaaa         <  3:130658/149‑1 (MQ=255)                                                                                                                                      cGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCGGTGACCGTGCTTCGGGTGAGCGCAACGGCAACCAGCACCTGCACCAAAaga       <  8:342621/149‑1 (MQ=255)                                                                                                                                       gAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCGGTGACCGTGCTTCGGGTGAGCGCAACGGCAACCAGCACCTGCACCAAAagag      <  6:186635/149‑1 (MQ=255)                                                                                                                                          cccAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCGGTGACCGTGCTTCGGGTGAGCGCAACGGCAACCAGCACCTGCACCAAAAGAGCGa   >  2:285945/1‑149 (MQ=255)                                                                                                                                           ccAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCGGTGACCGTGCTTCGGGTGAGCGCAACGGCAACCAGCACCTGCACCAAAAGAGCGAt  <  3:110342/149‑1 (MQ=255)                                                                                                                                             |                                                                                                                                                    AGCAGCTCGGCCATGTCGTTGGCGGAATCCTTGAGGTTCTTTTCCAGGGTGCTGCGTAGTTGCTGCTGCTCGCTTTGCAGGCGCTCCGACAACCCTGCGCTCAGGCGCTGGCGGGTACTGCTGGACAGGCCGTCGAGCCCAGAGC‑GCACATCTTGCCCGGCTTGCTCCAGATCGCTTGCGAGTTGGCGGCTGTCATTACCCAGCCGTTCGCCAAGGTCGGCCTCCAGGGCGGTGACCGTGCTTCGGGTGAGCGCAACGGCAACCAGCACCTGCACCAAAAGAGCGAT  >  NC_002947/5557280‑5557566

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.