| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,900,065 | A→G | 9.5% | intergenic (+26/‑472) | PP_4308 → / → PP_4309 | AsnC family transcriptional regulator/NCS1 family transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,900,065 | 0 | A | G | 9.5% | 199.6 / 8.9 | 73 | intergenic (+26/‑472) | PP_4308/PP_4309 | AsnC family transcriptional regulator/NCS1 family transporter |
| Reads supporting (aligned to +/- strand): ref base A (32/34); new base G (3/4); total (35/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.67e-01 | |||||||||||
CTGCATGTGCGCTCGATGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTATTTTGACCA > NC_002947/4899917‑4900206 | cTGCATGTGCGCTCGATGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCa < 6:358668/149‑1 (MQ=255) cATGTGCGCTCGATGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGGGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCa < 4:176522/146‑1 (MQ=255) cATGTGCGCTCGATGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGc < 5:117952/149‑1 (MQ=255) aTGTGCGCTCGATGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGc > 8:286460/1‑148 (MQ=255) aTGTGCGCTCGATGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGc < 7:286460/148‑1 (MQ=255) aTGTGCGCTCGATGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCg < 5:112084/149‑1 (MQ=255) cgcTCGATGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGccc > 4:282731/1‑149 (MQ=255) cTCGATGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCgc > 8:36234/1‑142 (MQ=255) cTCGATGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCgc < 7:36234/143‑2 (MQ=255) cTCGATGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCcgc > 8:247744/1‑149 (MQ=255) cTCGATGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCCGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCcgc < 4:144244/149‑1 (MQ=255) aTGGAGCAGCTTGACACCCTTCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGTTTGATTGGCTGCTGT‑‑GCTGGCCTCTTCGCGGGCACGCGTGCGAag < 4:161347/149‑1 (MQ=255) tGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAaga < 8:38500/149‑1 (MQ=255) gAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑ACTGGCCTCTTCGCGGGCACGCCTGCGAagag < 3:352828/148‑1 (MQ=39) agcTGGACACCCTGCTCCACCTCATTAATGTGCTGGCCGAGACAAAAACCCCTATCAACAACAAGACCCCGGTAAAGCGGCGGTTGCCGCCAATGGATTTTTTGGCTCCTGT‑‑GCTGGCCTCTTCGCGGGCACGCCTGCTAAGAGGCCAg < 2:363514/149‑1 (MQ=25) acacCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAgg < 3:247732/149‑1 (MQ=255) ccTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGc < 3:360826/136‑1 (MQ=255) ccTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGc > 4:360826/1‑136 (MQ=255) cTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAg > 3:317271/1‑117 (MQ=255) cTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAg < 4:317271/117‑1 (MQ=255) cTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAg < 4:48628/149‑1 (MQ=255) tGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAg < 1:146245/137‑1 (MQ=255) aCCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTa > 4:134539/1‑149 (MQ=255) cTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTAtt > 4:188866/1‑149 (MQ=255) tCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑a > 7:73077/1‑143 (MQ=255) tCATGAATGGGCTGGCCGAGACCAATACCGCGATACTCAATAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑a < 8:73077/143‑1 (MQ=255) aTGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAg < 1:163594/126‑1 (MQ=255) aTGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAg > 2:163594/1‑126 (MQ=255) tGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTAtttttt < 3:262680/149‑1 (MQ=255) tGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTAtttttt < 3:216826/149‑1 (MQ=255) aTGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTa < 3:188866/149‑1 (MQ=255) tgCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTaca > 7:217513/1‑148 (MQ=255) cTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTAcaca < 1:68459/148‑1 (MQ=255) tGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACaa > 3:240357/1‑148 (MQ=255) tGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCAAATACCAGGCCTGCCCCCGGAGAGGCCCGTACAAGAAAAGCAT‑AGTATTTTTTTTAAACaa > 2:184694/1‑148 (MQ=255) gCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACaaaaa < 3:282731/149‑1 (MQ=255) ccGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCTAAGAGGCCTGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAAc < 1:66142/149‑1 (MQ=255) cGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAACGCTG‑AGTATTTTTTGTACACAAAACCg > 1:78175/1‑149 (MQ=255) gaCCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAg > 8:11720/1‑114 (MQ=255) cAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCGGGcac < 8:136698/89‑3 (MQ=255) cAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCGGGcac > 7:136698/1‑87 (MQ=255) aaTACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAACGTAACCAt < 7:247744/149‑1 (MQ=255) aTACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAACGTAACCATa < 1:184694/149‑1 (MQ=255) aCCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAACGTAACCATAgg > 8:125139/1‑149 (MQ=255) ccGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAACGTAACCATAGGt < 6:300191/149‑1 (MQ=255) cgcgATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAACGTAACCATAGGTg > 7:167659/1‑149 (MQ=255) gATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGTGAGATGCCATCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAACTTAACCATAGGTg > 1:291769/1‑148 (MQ=255) atcaAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAATGTAACCATAGGTGCCAtttt > 6:132332/1‑149 (MQ=255) aagaagACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTtg < 4:240357/148‑1 (MQ=255) gaagaCCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTtgtgt < 3:134539/149‑1 (MQ=255) gaagaCCCCGGTCAAGCGGCGGGTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTTTACACAAAAACGTAACCATAGGTGCCATTTTtgtgt < 6:288470/149‑1 (MQ=255) gTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTttctt < 6:105221/149‑1 (MQ=255) gTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTACTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGccc < 7:241819/149‑1 (MQ=255) gccAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTc > 5:51192/1‑149 (MQ=255) aaTGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGt > 1:294409/1‑148 (MQ=255) gattgattGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCGG‑AGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTacac > 3:3259/1‑149 (MQ=255) ttgGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTc < 2:291769/149‑1 (MQ=255) gCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACATGAAAAGCTGCAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCAttttt < 1:70646/103‑1 (MQ=255) gCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGcc < 8:67539/126‑1 (MQ=255) gCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGcc > 7:67539/1‑126 (MQ=255) gCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTAAACAAAAACGTAACCATAGGTGCCAttttt > 2:70646/1‑102 (MQ=255) tCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAACGTAACTATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCAccc > 5:1238/1‑149 (MQ=255) cTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCctc > 3:234573/1‑149 (MQ=255) tGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTAtttt > 6:308006/1‑149 (MQ=255) gCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTAtttt < 8:217513/147‑1 (MQ=255) ccTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAATGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTATTTTGAc < 5:132332/149‑1 (MQ=255) ccTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTATTTTGAc > 2:175629/1‑149 (MQ=255) tctTCGCGGGCACGCCTGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTATTTTGAcc > 5:189186/1‑148 (MQ=255) tctTCGCGGGCACGCCTGAGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACAAAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCACAAATTCGTTACAAACTTTAGACACTCTAttttcaac > 4:370067/1‑144 (MQ=255) tctTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCCCCCTCTATTTTGAcc > 6:224915/1‑148 (MQ=255) ctTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCAGTTTTGTGTGCAGTTTCTTCAGTGGCGACCCAATTCGTTACACAGTTTGCACCCTCTATTTTGACCa > 7:169061/1‑148 (MQ=255) ttCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTttctt > 6:165039/1‑99 (MQ=255) ttCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTttctt < 5:165039/99‑1 (MQ=255) gCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTg > 2:162790/1‑101 (MQ=255) gCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTg < 1:162790/101‑1 (MQ=255) | CTGCATGTGCGCTCGATGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGATTGGCTCCTGT‑‑GCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTG‑AGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTATTTTGACCA > NC_002947/4899917‑4900206 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |