| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,070,513 | A→T | 7.6% | L125Q (CTG→CAG) | PP_4466 ← | TauD/TfdA family dioxygenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,070,513 | 0 | A | T | 7.6% | 195.1 / 5.4 | 66 | L125Q (CTG→CAG) | PP_4466 | TauD/TfdA family dioxygenase |
| Reads supporting (aligned to +/- strand): ref base A (27/34); new base T (2/3); total (29/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.14e-01 | |||||||||||
AGACCTCCCGCCGCGTCATACACGCTCTGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCTTTTTGCGTTGGATGAGCGCCCTCTTG > NC_002947/5070366‑5070661 | aGACCTCCCGCCGCGTCATACACGCTCTGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCgcag > 8:204932/1‑149 (MQ=255) cgccgcGTCATACACGCTCTGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTc < 6:180683/149‑1 (MQ=255) gcgTCATACACGCTCTGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGc < 7:255707/149‑1 (MQ=255) gcgTCATACACGCTCTGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCACTGCTGCGCTCCatt < 5:159362/149‑3 (MQ=255) cgTCATACACGCTCTGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAg > 1:37103/1‑147 (MQ=255) cgTCATACACGCTCTGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAg < 2:37103/147‑1 (MQ=255) cgTCATACACGCTCTGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCt > 8:188038/1‑149 (MQ=255) aTACACGCTCTGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCtggtg < 5:332690/149‑1 (MQ=255) aTACACGCTCTGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCtggt < 1:145731/148‑1 (MQ=255) aTACACGCTCTGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCtggt < 2:98268/148‑1 (MQ=255) tACACGCTCTGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCtggtg > 5:175504/1‑148 (MQ=255) acacGCTCTGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCACTGCTGCGCTCCatt > 5:49887/1‑140 (MQ=255) acacGCTCTGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCACTGCTGCGCTCCatt < 6:49887/142‑3 (MQ=255) cacGCTCTGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATAGATACCCAATAGGTGTCACCACCACTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGAc > 6:246470/1‑149 (MQ=255) acGCTCTGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACg > 2:365641/1‑149 (MQ=255) acGCTCTGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACg > 6:238033/1‑149 (MQ=255) ctctGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTc < 7:204932/149‑1 (MQ=255) gaagaaGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTa < 3:172827/147‑1 (MQ=255) gaagaaGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCCCCAGCTGGTGGACGCTc > 7:121271/1‑144 (MQ=255) gaagaaGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCCCCAGCTGGTGGACGCTc < 8:121271/144‑1 (MQ=255) agaagaTCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAAc > 2:233983/1‑149 (MQ=255) gaagaTCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAAcc < 3:67456/149‑1 (MQ=255) agaTCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAg < 5:183185/149‑1 (MQ=255) agaTCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAg < 1:365641/149‑1 (MQ=255) cGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGgt > 1:184970/1‑149 (MQ=255) cGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGgt < 7:188038/149‑1 (MQ=255) tttGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCg < 4:165915/142‑1 (MQ=255) tttGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCg > 3:165915/1‑142 (MQ=255) aGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGtcgcttcgct < 5:380725/149‑1 (MQ=255) ggCAGGGTCTCGTAAGCCTGATACATCGATAGCATATAGGTGTGACCTCCTGTGTGCGGAAGTGCAATTGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTTGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGc < 5:238033/149‑1 (MQ=255) aGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGTTGTTACCCAAAGCAcc < 1:343286/149‑1 (MQ=255) gggTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCAccc > 3:5400/1‑149 (MQ=255) gTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCt > 8:51631/1‑149 (MQ=255) aGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTa < 1:146691/148‑1 (MQ=255) gCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGt > 5:15737/1‑88 (MQ=255) gCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGt < 6:15737/88‑1 (MQ=255) aTACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCtt < 1:233983/149‑1 (MQ=255) aTACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCt < 4:5400/148‑1 (MQ=255) aCATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGAt > 4:80821/1‑134 (MQ=255) aCATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCtt > 8:186751/1‑147 (MQ=255) aCATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTAGCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGAt < 3:80821/134‑1 (MQ=255) cATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTta < 5:355605/148‑1 (MQ=255) cATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTta < 2:184970/148‑1 (MQ=255) aTCGATACCCAATAGGTGTCACCATCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTtag > 7:234344/1‑148 (MQ=255) tACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAgtgt < 5:246470/149‑1 (MQ=255) tACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAgtgt < 6:175504/149‑1 (MQ=255) tACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAgtgt < 1:74113/149‑1 (MQ=255) ccAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCtggtgg < 8:158230/63‑1 (MQ=255) ccAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCtggtgg > 7:158230/1‑63 (MQ=255) ccAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAg < 4:68897/149‑1 (MQ=255) cAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTta < 3:159239/138‑1 (MQ=255) cAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTta > 4:159239/1‑138 (MQ=255) cAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAg > 2:291359/1‑148 (MQ=255) aaTAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTtagta < 1:77559/140‑1 (MQ=255) aaTAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTtagta > 2:77559/1‑140 (MQ=255) accaccAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCaaaa > 8:268713/1‑149 (MQ=255) caccaGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAAtt > 3:6394/1‑149 (MQ=255) ggCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCttttt < 8:234344/148‑1 (MQ=255) gCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCTTTTTGCGTTGGAt < 7:186751/148‑1 (MQ=255) gCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCTTTTTGCGTTGGAt > 8:146132/1‑148 (MQ=255) cAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCTTTTTGCGTTGGAt > 6:169135/1‑147 (MQ=255) aaTGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCTGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCTTTTTGCGTTGGATGAg > 3:289008/1‑149 (MQ=255) ctGGAGCACTGCTGCGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCttttt > 7:310864/2‑136 (MQ=255) ctGGAGCACTGCTGCGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCttttt < 8:310864/135‑1 (MQ=255) ggAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCTTTTTGCGTTg < 6:340806/140‑1 (MQ=255) ggAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCTTTTTGCGTTg > 5:340806/1‑140 (MQ=255) aGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCTTTTTGCGTTGGATGAGCGccc > 1:109884/1‑149 (MQ=255) agcagTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCTTTTTGCGTTGGAt < 6:128092/136‑1 (MQ=255) agcagTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCTTTTTGCGTTGGAt > 5:128092/1‑136 (MQ=255) agcagTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCTTTTTGCGTTGGATGAGCGcc < 4:129254/143‑1 (MQ=255) agcagTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCTTTTTGCGTTGGATGAGCGcc > 3:129254/1‑143 (MQ=255) agcagTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCTTTTTGCGTTGGATGAGCGCCCTCTTg > 8:14101/1‑149 (MQ=255) | AGACCTCCCGCCGCGTCATACACGCTCTGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCTTTTTGCGTTGGATGAGCGCCCTCTTG > NC_002947/5070366‑5070661 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |