| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,095,932 | C→A | 5.2% | intergenic (‑41/+48) | hisQ ← / ← argT | histidine/lysine/arginine/ornithine ABC transporter permease/lysine/arginine/ornithine ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,095,932 | 0 | C | A | 5.2% | 251.6 / 2.8 | 77 | intergenic (‑41/+48) | hisQ/argT | histidine/lysine/arginine/ornithine ABC transporter permease/lysine/arginine/ornithine ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base C (32/41); new base A (2/2); total (34/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.67e-01 | |||||||||||
GCCACACCGATCAGGCCGAGCACGATGGCCAGGGCCATCGACGACAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCTTTGTACTTGCCGTTGGCACGAATGGCGTCGATCGCCGCGTTGA > NC_002947/5095785‑5096077 | gcCACACCGATCAGGCCGAGCACGATGGCCAGGGCCATCGACGACAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCt < 4:100658/149‑1 (MQ=255) ccACACCGATCAGGCCGAGCACGATGGCCAGGGCCATCGACGACAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCt > 3:246434/1‑148 (MQ=255) cacaCCGATCAGGCCGAGCACGATGGCCAGGGCCATCGACGACAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCa < 7:193390/149‑1 (MQ=255) acacCGATCAGGCCGAGCACGATGGCCAGGGCCATCGACGACAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTGTCCACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCt > 4:129715/1‑146 (MQ=255) cacCGATCAGGCCGAGCACGATGGCCAGGGCCATCGACGACAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAACGAAAAATGGTGCAAACCTCaga < 6:218607/149‑1 (MQ=255) acCGATCAGGCCGAGCACGATGGCCAGGGCCATCGACGACAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCagag > 4:77901/1‑149 (MQ=255) ccGATCAGGCCGAGCACGATGGCCAGGGCCATCGACGACAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGc > 1:258862/1‑149 (MQ=255) tCAGGCCGAGCACGATGGCCAGGGCCATCGACGACAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCctct < 2:258862/149‑1 (MQ=255) ggCCGAGCACGATGGCCAGGGCCATCGACGACAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTctgct > 4:24309/1‑149 (MQ=255) ccGAGCACGATGGCCAGGGCCATCGACGACTGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGt < 4:246434/149‑1 (MQ=255) ccGAGCACGATGGCCAGGGCCATCGACGACAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGt < 6:276411/149‑1 (MQ=255) cGAGCACGATGGCCAGGGCCATCGACGACAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCctct < 8:340153/143‑1 (MQ=255) cGAGCACGATGGCCAGGGCCATCGACGACAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCctct > 7:340153/1‑143 (MQ=255) cGAGCACGATGGCCAGGGCCATCGACGACAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGtt < 3:24309/149‑1 (MQ=255) gAGCACGATGGCCAGGGCCATCGACGACAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGttt < 3:190913/149‑1 (MQ=255) gCACGATGGCCAGGGCCATCGACGACAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGc < 1:177442/149‑1 (MQ=255) aCGATGGCCAGGGCCATCGACGACAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCAc < 3:77901/149‑1 (MQ=255) cGATGGCCAGGGCCATCGACGACAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACAGCAGAGGCTCTGAGGTTTGCAcc < 7:317352/149‑1 (MQ=39) gATGGCCAGGGCCATCGACGACAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGc < 6:165818/145‑1 (MQ=255) gATGGCCAGGGCCATCGACGACAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGc > 5:165818/1‑145 (MQ=255) gggCCATCGACGACAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAg < 2:301019/149‑1 (MQ=255) gggCCATCGACGACAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAg < 6:1768/149‑1 (MQ=255) gCCATCGACGACAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGt < 1:362622/149‑1 (MQ=255) aTCGACGACAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGttt > 6:186293/1‑130 (MQ=255) aTCGACGACAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGttt < 5:186293/130‑1 (MQ=255) gacgacAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAAc < 3:78756/148‑1 (MQ=255) acAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGttt < 6:377812/123‑1 (MQ=255) acAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGttt > 5:377812/1‑123 (MQ=255) ggCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCt > 2:316275/1‑149 (MQ=255) tCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTgg < 4:340090/149‑1 (MQ=255) aGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGAc < 3:356006/149‑1 (MQ=255) cACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTCCGAGTCTGGACCGt < 7:320687/149‑1 (MQ=255) ccccGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGAt < 4:312431/149‑1 (MQ=255) cGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTc < 5:146642/149‑1 (MQ=255) cGTCGAGGATGACTGCCCCGTAGCCTCTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTCCACACCTCAGAGCCTCTGCTGTTTGCCCCATTGCACAGGGGAAACCCGACGTCTTACGTCGAGTCTGGACCGTAGATGTc > 5:102093/1‑149 (MQ=255) cGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGa > 2:43210/1‑148 (MQ=255) gAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGaaa > 3:112334/1‑149 (MQ=255) ggATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAAtt > 1:98014/1‑149 (MQ=255) tGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGaa < 1:316275/149‑1 (MQ=255) tGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGaa < 4:112334/149‑1 (MQ=255) cTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGt > 6:207549/1‑148 (MQ=255) cGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCGAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCt > 5:330996/1‑149 (MQ=255) tAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCttt < 5:207549/149‑1 (MQ=255) tttCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATg > 2:51595/1‑122 (MQ=255) tttCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATg < 1:51595/122‑1 (MQ=255) ttCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGAtt > 4:122884/1‑148 (MQ=255) aaCATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGAt < 6:104153/117‑1 (MQ=255) aCATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCttt > 1:26078/1‑149 (MQ=255) atgaGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCTTTGTACt > 1:345170/1‑149 (MQ=255) atgaGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCTTTGTACt < 2:345170/149‑1 (MQ=255) aGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCTTTGTACTTg < 3:122884/148‑1 (MQ=255) gTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCTTTGTACTTGCCg > 2:16563/1‑149 (MQ=255) gTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCTTTGTACTTGCCg < 2:98014/149‑1 (MQ=255) gTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCGTTGTACTTGCCg > 7:296388/1‑149 (MQ=255) cTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCTTTGTACTTGCCGTTg > 2:81276/1‑149 (MQ=255) cTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACAGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCTTTGTACTTGCCGTTg > 6:79578/1‑149 (MQ=255) tctccTAGAGATTGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCTTTGTACTTGCCGTTg < 3:308794/144‑1 (MQ=255) cTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCTTTGTACTTGCCGTTg > 4:308794/1‑143 (MQ=255) tAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGaa < 3:263120/108‑1 (MQ=255) tAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGaa > 4:263120/1‑108 (MQ=255) tAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCt > 7:273504/1‑127 (MQ=255) tAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCt < 8:273504/127‑1 (MQ=255) gagaATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCttt < 8:184375/127‑1 (MQ=255) gagaATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCttt > 7:184375/1‑127 (MQ=255) aaTGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCTTTGTACTTGCCGTTGGCACGAATg > 5:184862/1‑146 (MQ=255) aaTGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCTTTGTACTTGCCGTTGGCACGAATg < 6:184862/146‑1 (MQ=255) tGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCTTTGTACTTGCCGTTGGCACGAATGGCGTc < 1:43210/149‑1 (MQ=255) tGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGGCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCTTTGTACTTGCCGTTGGCACGAATGGCGTc < 3:129715/149‑1 (MQ=255) tGCTAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCTTTGTACTTGCCGTTGGCACGAATGGCGTCGATCGCcgcg < 6:330996/149‑1 (MQ=255) tGCAAACAGCAGAGGCTCTGAGGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACGGTAGATGTAGAAATTGAAGTACTTGCTTTCGATTTCTTTGTACTTGCCGTTGGAACGAATGTCGTCCATCGCcgcg > 5:263522/1‑149 (MQ=255) gCAAACAGCAGAGGCTCTGAGGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCttt < 5:216989/111‑1 (MQ=38) gCAAACAGCAGAGGCTCTGAGGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCttt > 6:216989/1‑111 (MQ=38) cAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCTTTGTACTTGCCGTAGGCACGAATGGCGTCGATCGCCGCGtt < 1:16563/149‑1 (MQ=255) aaaCCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTTCTTGCTTTCGATTTCTTTGTACTTGCCGTTGGCACGAATGGCGTCGATCGCCGCGtt > 6:266923/1‑148 (MQ=255) aaaCCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCTTTGTACTTGCCGTTGGCACGAATGGCGt > 7:219508/1‑135 (MQ=255) aaaCCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCTTTGTACTTGCCGTTGGCACGAATGGCGt < 8:219508/135‑1 (MQ=255) aaCCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCTTTGTACTTGCCGTTGGCACGAATGGCGTCGATCGCCGCGTTGa > 2:5942/1‑149 (MQ=255) cTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCTTTGTACTTGCCGTTGGCACGAAt > 4:271715/1‑126 (MQ=255) cTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCTTTGTACTTGCCGTTGGCACGAAt < 3:271715/126‑1 (MQ=255) | GCCACACCGATCAGGCCGAGCACGATGGCCAGGGCCATCGACGACAGGGCGAGCTGTAGCGTCAGCCACGCCCCGTCGAGGATGACTGCCCCGTAGCCTTTCAACATGATGAGGTCCTCGACCTAGAGAATGAAAAATGGTGCAAACCTCAGAGCCTCTGCTGTTTGCACCATTGCACAGGTGAAACCCGACGTCTTACTTCGAGTCTGGACCGTAGATGTCGAAATTGAAGTACTTGCTTTCGATTTCTTTGTACTTGCCGTTGGCACGAATGGCGTCGATCGCCGCGTTGA > NC_002947/5095785‑5096077 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |