| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,100,956 | A→T | 11.0% | M224K (ATG→AAG) ‡ | phhR ← | sigma‑54 dependent transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,100,956 | 0 | A | T | 11.0% | 178.2 / 11.3 | 71 | M224K (ATG→AAG) ‡ | phhR | sigma‑54 dependent transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (33/29); new base T (3/5); total (36/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.72e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.03e-01 | |||||||||||
TCGGCCATCGACTCGGGCAGCCCGGCGCAGTTGAGCGCCATCAGCGGCGACTGCCCACGCGGGCTGGCCAGGTGGCAGGCACGCGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGCTCGCCGATCCGGTCGGCACGGTGCAGGGTAAGCACCGCGCCGGCCAGCGC > NC_002947/5100809‑5101104 | tcGGCCATCGACTCGGGCAGCCCGGCGCAGTTGAGCGCCATCAGCGGCGACTGCCCACGCGGGCTGGCCAGGTGGCAGGCACGCGCCAGCAACTCCTTGCCGGTTCCGGGTTCGCCCACGATCAGCAACGG‑TGCATCCAGCGGCGCCAt > 1:79164/1‑149 (MQ=255) cGGCCATCGACTCGGGCAGCCCGGCGCAGTTGAGCGCCATCAGCGGCGACTGCCCACGCGGGCTGGCCAGGTGGCAGGCACGCGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATg > 3:274391/1‑149 (MQ=255) ccATCGACTCGGGCAGCCCGGCGCAGTTGTGCGCCATCAGCGGCGACTGCCCACGCGGGCTGGCCAGGTGGCAGGCACGCGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATgcgc > 1:216765/1‑149 (MQ=255) aTCGACTCGGGCAGCCCGGCGCAGTTGAGCGCCATCAGCGGCGACTGCCCACGCGGGCTGGCCAGGTGGCAGGCACGCGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGcgcc‑g > 7:252359/1‑149 (MQ=255) cTCGGGCAGCCCGGCGCAGTTGAGCGCCATCAGCGGCGACTGCCCACGCGGGCTGGCCAGGTGGCAGGCACGCGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCATGGcgcc‑gctgga < 7:115213/149‑5 (MQ=255) gggCAGCCCGGCGCAGTTGAGCGCCATCAGCGGCGACTGCCCACGCGGGCTGGCCAGGTGGCAGGCACGCGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCAc > 7:30173/1‑149 (MQ=255) cccGGCGCAGTTGAGCGCCATCAGCGGCGACTGCCCACGCGGGCTGGCCAGGTGGCAGGCACGCGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCATGGcgcc‑gctg > 7:234517/1‑136 (MQ=255) cccGGCGCAGTTGAGCGCCATCAGCGGCGACTGCCCACGCGGGCTGGCCAGGTGGCAGGCACGCGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCATGGcgcc‑gctg < 8:234517/138‑3 (MQ=255) ccGGCGCAGTTGAGCGCCATCAGCGGCGACTGCCCACGCGGGCTGGCCAGGTGGCAGGCACGCGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGcaccac > 4:205742/1‑149 (MQ=255) cAGTTGAGCGCCATCAGCGGCGACTGCCCACGCGGGCTGGCCAGGTGGCAGGCACGCGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGc > 6:114074/1‑149 (MQ=255) cggcgACTGCCCACGCGGGCTGGCCAGGTGGCAGGCACGCGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCATCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGctct > 4:341591/1‑149 (MQ=255) cggccACTGCCCCCGCCGGCTGCCCTGGGGCCCGGCACGCGCCACCACCTCCTGCCCGTGTCCGCTGTCGCCCGCGCTCCGCACCGT‑GGCAGCCAGCGGCGCCAGTCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGctct < 8:176323/149‑1 (MQ=255) ggcgACTGCCCACGCGGGCTGGCCAGGTGGCAGGCACGCGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTg < 8:252359/149‑1 (MQ=255) ggcgACTGCCCACGCGGGCTGGCCAGGTGGCAGGCACGCGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTg < 5:107347/149‑1 (MQ=255) tGCCCACGCGGGCTGGCCAGGTGGCAGGCACGCGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGAt > 3:285014/1‑149 (MQ=255) cccACGCGGGCTGGCCAGGTGGCAGGCACGCGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATg < 3:180550/148‑1 (MQ=255) ccACGCGGGCTGGCCAGGTGGCAGGCACGCGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCt > 1:107580/1‑149 (MQ=255) ccACGCGGGCTGGCCAGGTGGCAGGCACGAGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCt > 1:316143/1‑149 (MQ=255) aCGCGGGCTGGCCAGGTGGCAGGCACGCGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCATGGcgcc‑gctgg > 6:181171/1‑100 (MQ=255) aCGCGGGCTGGCCAGGTGGCAGGCACGCGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCATGGcgcc‑gctgg < 5:181171/103‑4 (MQ=255) gcgGGCTGGCCAGGTGGCAGGCACGCGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCg < 4:274391/149‑1 (MQ=255) gCTGGCCAGGTGGCAGGCACGCGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGc > 7:218081/1‑149 (MQ=255) gCCAGGTGGCAGGCACGCGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCTGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAg < 2:811/132‑1 (MQ=255) gCCAGGTGGCAGGCACGCGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAg > 1:811/1‑132 (MQ=255) ccAGGTGGCAGGCACGCGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGc < 8:218081/149‑1 (MQ=255) ggcaggcaCGCGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGctct > 7:58625/1‑149 (MQ=255) aggcaCGCGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTg > 3:62940/1‑128 (MQ=255) aggcaCGCGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTg < 4:62940/128‑1 (MQ=255) aggcaCGCGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTcttgc > 2:44933/1‑149 (MQ=255) gcaCCCGCCAGAACCGCCTGGCC‑GTTGCGGGTTCCCCCCCCCTCACCCACGGCTGCACCCGGCGCCGCC‑TGCGCCGGCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTcttgctt < 2:184644/149‑1 (MQ=255) ctcgcCTGCAACTCCTTGCCGTTTCCGGTTTCGCCCTCGATCAGCATCGT‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTTGAAGATGCTGTCGAAGGCACGCAGCTcttgcttggg < 2:79164/147‑3 (MQ=255) gcgcCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTgcgc < 2:216765/149‑1 (MQ=255) gcgcCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTgcg > 4:293643/1‑148 (MQ=255) gcgcCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCATGGcgcc‑gc < 8:194278/74‑1 (MQ=255) gcgcCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCATGGcgcc‑gc > 7:194278/1‑74 (MQ=255) aGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATAAGCAACGG‑TGCATCCAGCGGCCCCATGCGCA‑GAGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTATGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCATGCGcaca > 5:145440/1‑147 (MQ=255) gCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTg < 8:30173/149‑1 (MQ=255) cAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTg > 2:133676/1‑148 (MQ=255) aaCTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTa < 7:4334/149‑1 (MQ=255) cTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATAc < 1:133676/149‑1 (MQ=255) ttGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACg > 4:52754/1‑149 (MQ=255) ttGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACg > 6:109544/1‑149 (MQ=255) ttGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACg > 6:339834/1‑149 (MQ=255) tccggttTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGCTCGCCGa > 7:16192/1‑149 (MQ=255) tttCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGCTCGCCGATCCgg > 7:286941/1‑149 (MQ=255) tCGCCCTCGATCAGCAACTG‑TGCATCCAGCGGCGCCATGCGCG‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGGAGCTCTTGCTTGCGCACATTGTAGATACGCTCGCCGATCCGGt < 6:145440/148‑1 (MQ=255) cTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGc < 4:259748/130‑1 (MQ=255) cTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGc > 3:259748/1‑130 (MQ=255) cTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGCTCGCCGATCCGGTCGGCAc > 5:307595/1‑149 (MQ=255) tCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCa < 2:13648/100‑1 (MQ=255) tCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCa > 1:13648/1‑100 (MQ=255) tCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCCCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGCTCGCCGATcc > 2:326636/1‑139 (MQ=255) tCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCCCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGCTCGCCGATcc < 1:326636/139‑1 (MQ=255) aGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGCTCGCCGATCCGGTCGGCACGGTGCAg < 8:58625/149‑1 (MQ=255) aGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGCTCGCCGATCCGGTCGGCACGGTGCAg < 5:339834/149‑1 (MQ=255) gCAACGG‑TGCATCCAGCGGCGCCTTGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGCTCGCCGATCCGGTCGGCACGGTGCAgg < 4:285014/149‑1 (MQ=255) gCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGCTCGCCGATCCGGTCGGCACGGTGCAgg < 8:286941/149‑1 (MQ=255) gCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGCTCGCCGATCCGGTCGGCACGGTGCAgg < 8:16192/149‑1 (MQ=255) cAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGCTCGCCGATCCGGTCGGCACGGTGCAggg > 5:49485/1‑149 (MQ=255) cAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTCTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGCTCGCCGATCCGGTCGGCACGGTGCAggg > 5:264174/1‑149 (MQ=255) aaCGG‑TGCATCCAGCGGCGCCATGCGCG‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGCTCGCCGATCCGGTCGGCACGGTGCAGGGt < 3:341591/149‑1 (MQ=255) aaCGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGCTCGCCGATCCGGTCGGCACGGTGCAGGGt < 6:307595/149‑1 (MQ=255) cATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGCTCGCCGATCCGGTCGGCACGGTGCAGGGTAAGCAcc > 8:322008/1‑149 (MQ=255) tCCCGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCGCTGTAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGCTCGCCGATCCGGTCGGCACGGTGCAGGGTAAGCACcgc < 3:205742/149‑1 (MQ=255) tCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGCTCGCCGATCCGGTCGGCACGGTGCAGGGTAAGCACcgc < 6:49485/149‑1 (MQ=255) ccAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGCTCACCGATCCGGTCGGCACGGTGCAGGGTAAGCACcgcg > 7:94081/1‑149 (MQ=255) cAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGCTCGCCGATCCGGTCGGCACGGTGCAGGGTAAGCACCgcgc < 2:107580/149‑1 (MQ=255) gcggcgCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGCTCGCCGATCCGGTCGGCACGGTGCAGGGTAAGCACCGCGCCg < 3:52754/149‑1 (MQ=255) ggcgCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGCTCGCCGATCCGGTCGGCACg > 5:315794/1‑125 (MQ=255) ggcgCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGCTCGCCGATCCGGTCGGCACg < 6:315794/125‑1 (MQ=255) ccATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGCTCGCCGATCCGGTCGGCACGGTGCAGGGTAAGCACCGCGCCGGCCAgc < 5:109544/149‑1 (MQ=255) aTGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGt < 7:308426/91‑1 (MQ=255) aTGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGt > 8:308426/1‑91 (MQ=255) aTGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGCTCGCCg < 7:29992/105‑1 (MQ=255) aTGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGCTCGCCg > 8:29992/1‑105 (MQ=255) aTGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGCTCGCCGATCCGGTCGGCACGGTGCAGGGTAAGCACCGCGCCGGCCAgcgc > 8:339839/1‑149 (MQ=255) | TCGGCCATCGACTCGGGCAGCCCGGCGCAGTTGAGCGCCATCAGCGGCGACTGCCCACGCGGGCTGGCCAGGTGGCAGGCACGCGCCAGCAACTCCTTGCCGGTTCCGGTTTCGCCCTCGATCAGCAACGG‑TGCATCCAGCGGCGCCATGCGCC‑GCGCTTCACGCACCACGGCAGCCATCACCCGCGAGCTCTGGAAGATGCTGTCGAAGCCACGCAGCTCTTGCTTGCGCACATTGTAGATACGCTCGCCGATCCGGTCGGCACGGTGCAGGGTAAGCACCGCGCCGGCCAGCGC > NC_002947/5100809‑5101104 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |