| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 36,171 | A→T | 9.3% | intergenic (+56/+27) | PP_0032 → / ← PP_0033 | hypothetical protein/undecaprenyl‑glycosyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 36,171 | 0 | A | T | 9.3% | 245.1 / 13.3 | 86 | intergenic (+56/+27) | PP_0032/PP_0033 | hypothetical protein/undecaprenyl‑glycosyl transferase |
| Reads supporting (aligned to +/- strand): ref base A (37/41); new base T (5/3); total (42/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.88e-01 | |||||||||||
CTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGAT > NC_002947/36034‑36318 | ctctTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCtt > 5:229456/1‑149 (MQ=255) tctTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTTGCttt > 7:327882/1‑149 (MQ=255) tctTCGGAAAAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAATCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGAAGAAAGAAATCGACAAAAAAGACAGGGTTTAAGCTGGCttt > 5:105104/1‑149 (MQ=255) ttCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCttttt > 7:191536/1‑149 (MQ=255) ttCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCttt < 8:27873/147‑1 (MQ=255) cGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAGGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCttt < 8:182390/145‑1 (MQ=255) cGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGTTTTACCCTGGCttttt < 7:35028/147‑1 (MQ=255) cGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCtttttt < 4:77291/148‑1 (MQ=255) cGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCtttt < 5:376437/146‑1 (MQ=255) ggACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTtg < 8:191536/148‑1 (MQ=255) aaGAACAAAAATCATGTCGATAAATAGCAAAAGAATTAAAGCAATGATGGTAAGGAACAAGCCGACAATTAATCGTCGGTTAAATAGGACTTCAAATGAAGAAAGAAATCGACAAAAAAGCCAGGTTTTACCCTGGCTTTTTtgtcgat < 6:105104/148‑5 (MQ=25) aGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTg > 2:320346/1‑149 (MQ=255) gAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTg > 6:324494/1‑148 (MQ=255) aacaacAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGGTTTTTTGTGCTTGGAAtt > 2:261759/1‑148 (MQ=255) acaacaAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTa < 4:78399/149‑1 (MQ=255) aacaaGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGc > 6:282617/1‑149 (MQ=255) acaaGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGcc > 7:113155/1‑149 (MQ=255) aaaGTCGCTCAAGATCAAAAGAAATAAAGCAAGTATGGTAAGTAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCATGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCt < 4:164503/148‑1 (MQ=255) tCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGaa > 7:324125/1‑133 (MQ=255) tCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGaa < 8:324125/133‑1 (MQ=255) aaGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCtt < 8:113155/147‑1 (MQ=255) aaGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGc > 5:106135/1‑149 (MQ=255) aaGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGc > 2:152175/1‑149 (MQ=255) gagCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGa < 6:143102/149‑1 (MQ=255) gagCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGa < 6:229456/149‑1 (MQ=255) aaaaGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGATGCg > 8:317947/1‑149 (MQ=255) aaagaaagaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGt > 3:59657/1‑149 (MQ=255) aaagaaagaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGt > 1:333353/1‑149 (MQ=255) aagaaagaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGcc < 3:179717/130‑1 (MQ=255) aagaaagaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGcc > 4:179717/1‑130 (MQ=255) aaagaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGa > 3:191606/1‑140 (MQ=255) aaagaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGa < 4:191606/140‑1 (MQ=255) agaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTg > 6:107349/1‑135 (MQ=255) agaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTg < 5:107349/135‑1 (MQ=255) agaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCg > 3:182593/1‑148 (MQ=255) agaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGc < 6:129975/149‑1 (MQ=255) gCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGc > 3:332495/1‑149 (MQ=255) aGGATGGTAAGTAACCAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCttt < 6:205562/149‑1 (MQ=255) aGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCttt < 1:46199/149‑1 (MQ=255) ggTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCg > 1:220542/1‑149 (MQ=255) ttAATGAACAAGCCGACAATTTATCGGCGGTTAAATAGGACTTCAAATGACGATAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCg < 8:327882/147‑1 (MQ=255) gTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCgg < 4:332495/149‑1 (MQ=255) tAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGTTTTACCCTGGCTTTTTtg > 4:306478/1‑94 (MQ=38) tAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGTTTTACCCTGGCTTTTTtg < 3:306478/94‑1 (MQ=38) tAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGc > 1:327491/1‑149 (MQ=255) tAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGc < 4:182593/149‑1 (MQ=255) tAACGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGc < 4:32872/121‑1 (MQ=255) aaGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGc > 2:225463/1‑148 (MQ=255) aGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTc < 5:273762/149‑1 (MQ=255) ccGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCgg < 5:282617/149‑1 (MQ=255) aCAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCAc > 7:76105/1‑149 (MQ=255) cAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCAcc < 2:220542/149‑1 (MQ=255) ggcggTTAAATAGGCCTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCggg < 4:291908/149‑1 (MQ=255) ggcggTTAAATAGGACTTCAAATGTCGAAAGAAATCGAGAAAAATGCCAGGGTAAAACCTTGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCggg < 7:50573/149‑1 (MQ=255) ggTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCg > 1:236252/1‑149 (MQ=255) ttAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGtt > 3:63028/1‑149 (MQ=255) aaTAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTc < 1:320346/148‑1 (MQ=255) aGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTc < 4:263455/145‑1 (MQ=255) aGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTc > 3:263455/1‑145 (MQ=255) aGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAAt > 6:19919/1‑149 (MQ=255) ggACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAAt < 2:327491/148‑1 (MQ=255) gACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCtt > 4:287246/1‑129 (MQ=255) gACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCtt < 3:287246/129‑1 (MQ=255) gACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATgg < 2:236252/149‑1 (MQ=255) aCTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGc < 4:59657/149‑1 (MQ=255) cTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGca < 1:152175/149‑1 (MQ=255) ttCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGca > 2:256185/1‑148 (MQ=255) cAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGcac < 5:324494/147‑1 (MQ=255) gaaagaaaTCGACAAAAAAGCCAGGGTAAAACCTGGGTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGGATTGCTTTCTCCGGCCATACCCTAGGCACCTGGTGCGGGGCGGTTCCAATGGCACAGCAGGAgct > 2:269636/1‑149 (MQ=255) gaaagaaaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAgct > 1:358773/1‑149 (MQ=255) aagaaaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAgctgg > 8:102446/1‑149 (MQ=255) agaaaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGATCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAgctggc < 1:87306/149‑1 (MQ=255) aaaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAgct > 1:234252/1‑144 (MQ=255) aaaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAgct < 2:234252/144‑1 (MQ=255) cGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAAT‑GCACAGCAGGAGCTGGCTGGCGtt > 2:176030/1‑149 (MQ=255) aCAAAAAAGCCAGGTTTTACCCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTc > 3:120313/1‑149 (MQ=255) aCAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAAt < 5:121355/123‑1 (MQ=255) aCAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAAt > 6:121355/1‑123 (MQ=255) aCAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTCCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTc > 4:355682/1‑149 (MQ=255) aaaaaaGCCAGGTTTTACCCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGc > 2:142878/1‑149 (MQ=255) aaaaaaGCCAGGTTTTACCCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGc > 4:184911/1‑149 (MQ=255) aaaGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGATGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTc < 7:317947/149‑1 (MQ=255) gCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCATAGCAGGAGCTGGCTGGCGTTc < 4:161542/141‑1 (MQ=255) gCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCATAGCAGGAGCTGGCTGGCGTTc > 3:161542/1‑141 (MQ=255) gggTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATc < 1:256185/149‑1 (MQ=255) tAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGAt < 7:102446/149‑1 (MQ=255) | CTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGAT > NC_002947/36034‑36318 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |