| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,351,980 | A→C | 7.0% | intergenic (‑233/+31) | PP_4707 ← / ← pnp | OsmY‑like protein/polyribonucleotide nucleotidyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,351,980 | 0 | A | C | 7.0% | 269.4 / 9.7 | 86 | intergenic (‑233/+31) | PP_4707/pnp | OsmY‑like protein/polyribonucleotide nucleotidyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (40/40); new base C (3/3); total (43/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.68e-01 | |||||||||||
TGCTTCTGTTATTTCCTTTTAAATCAATAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTGGCCTTCCTTGAGGATGTCGGT > NC_002947/5351835‑5352127 | tgctTCTGTTATTTCCTTTTAAATCAATAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAgg > 3:88348/1‑149 (MQ=255)tgctTCTGTTATTTCCTTTTAAATCAATAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCACATGAAAAAATGGCACTGCGAAgg > 2:168530/1‑149 (MQ=255)tgctTCTGTTATTTCCTTTTAAATCAATAAGTAAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGAGCGGTAAACATGCATGCAAGATGAAAGTCCGCAAAAGGTTCCCGTCCCAATGAAAAAAGGACAATGCAAAgg > 7:44675/1‑149 (MQ=255) ctTCTGTTATTTCCTTTTAAATCAATAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAggg < 5:378052/148‑1 (MQ=255) ttCTGTTATTTCCTTTTAAATCAATAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGcc > 4:184784/1‑149 (MQ=255) tGTTATTTCCTTTTAAATCAATAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCtt > 1:274025/1‑149 (MQ=255) gTTATTTCCTTTTAAATCAATAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCtt > 3:43366/1‑148 (MQ=255) ttATTTCCTTTTAAATCAATAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTTCGCAGGGCCCt < 7:181386/146‑1 (MQ=255) ttATTTCCTTTTAAATCAATAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCttt < 3:184784/148‑1 (MQ=255) tttCCTTTTAAATCAATAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTtctc > 8:325986/1‑148 (MQ=255) ttCCTTTTAAATCAATAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTCCTCTa > 8:287896/1‑149 (MQ=255) ttttAAATCAATAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGc > 8:163396/1‑149 (MQ=255) ttttAAATCAATAAGTAAGCAAATATCTATCACTTAGGTCGTCGTGCAATTTGCAATCAGCCCGGTAAACCTGAATGCAAGATGCAAGTACGCAAAAGGTTCCCGTCCCCATTAAAAAAGGTCCCTGCGAAGGGCACTTTCTATATTGc > 4:162953/1‑149 (MQ=255) ttAAATCAATAAGTTAGCAAATATCTATCACTTCGGTGTTCGTGCATTTTGCAATCATCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGc < 7:163396/147‑1 (MQ=255) aaTCAATAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCATGCGAAGGGCCCTTTCTCTATTGCGTGAc > 4:50877/1‑149 (MQ=255) aTCAATAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACg > 3:63909/1‑149 (MQ=255) aaTAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGTAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTc < 6:220547/149‑1 (MQ=255) aaTAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTc > 6:96925/1‑149 (MQ=255) cAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGc > 2:215679/1‑149 (MQ=255) atctatcACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAg > 4:93743/1‑149 (MQ=255) ctatcACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGc > 4:274707/1‑149 (MQ=255) tcACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCtt > 5:115734/1‑149 (MQ=255) tcACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCtt < 1:212237/149‑1 (MQ=255) tcACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCt < 8:298818/148‑1 (MQ=255) tcACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTCCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCtt < 7:287896/149‑1 (MQ=255) cACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTg > 1:212828/1‑149 (MQ=255) aCTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTgg < 8:4103/149‑1 (MQ=255) aCTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTg < 2:274025/148‑1 (MQ=255) cTTCGGTGGTCGTGCTTTATGCATTCAGCGCGTTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCTCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTggg < 4:305963/149‑2 (MQ=255) cTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGc > 4:128984/1‑149 (MQ=255) ttCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAGGGGCCCTGCGAAgg < 5:208460/100‑1 (MQ=255) ttCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAGGGGCCCTGCGAAgg > 6:208460/1‑100 (MQ=255) ggtggtCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGc > 3:100801/1‑124 (MQ=255) ggtggtCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGc < 4:100801/124‑1 (MQ=255) tCGTGCATTTTGCAATCAGCGCGGTAAACCTGGATGCAAGTTGCAAGTCCGCAAAAGTTTCCCGTCCCCATGTAAAATGGGCCCTGGGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGATTCCTTGGCCGCAGGGAc < 8:201163/149‑1 (MQ=255) gTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCAGAACCCATGAAAAAAGGGCCATGCGAAGGGCCGTTACACAATTGCTGGACGTTCGATTATACGCACGCGGCCTTGGCAGCAGAGACgg > 7:39/1‑148 (MQ=255) gTGCA‑TTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTc > 7:70233/1‑149 (MQ=255) cATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCtt < 7:325986/149‑1 (MQ=255) cATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCtt < 1:215679/149‑1 (MQ=255) ttttGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCttt > 6:90361/1‑148 (MQ=255) gaaaTCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATc < 8:44675/146‑1 (MQ=255) gCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATc < 5:96925/148‑1 (MQ=255) tCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAg > 5:2839/1‑149 (MQ=255) cgGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAATGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTgtt < 5:182382/149‑3 (MQ=255) ggTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATa > 7:2315/1‑149 (MQ=255) cgTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAATGGCCCTTTCTCTATTGCGTTACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATa < 3:50877/148‑1 (MQ=255) aaCCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGc < 4:88348/149‑1 (MQ=255) cTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCcgc > 8:62974/1‑149 (MQ=255) catgcaAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCgg < 5:90361/148‑1 (MQ=255) catgcaAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCgg < 6:115734/148‑1 (MQ=255) atgcaagatgcaagTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGtt > 4:67025/1‑149 (MQ=255) ctagattgcaagTCCCAAAACGGTTCCCGTCCCCATTAAAAACGGGCCCTGCGATGGGCCCTTTCTCTATTGCGTTACGTTCGATTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGt < 2:362943/143‑1 (MQ=255) aagatgcaagTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTc > 2:325869/1‑148 (MQ=255) aagatgcaagTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTc > 4:30780/1‑148 (MQ=255) gcaagTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATc < 4:260506/117‑1 (MQ=255) gcaagTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATc > 3:260506/1‑117 (MQ=255) gcaagTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGt > 1:362943/1‑142 (MQ=255) aagTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTc > 7:290113/1‑147 (MQ=255) aagTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTc < 8:290113/147‑1 (MQ=255) aagTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCa < 3:30780/149‑1 (MQ=255) gTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGt < 3:128984/149‑1 (MQ=255) gCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACaa < 4:43366/149‑1 (MQ=255) atggTTCCCGGCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCt < 4:223947/97‑1 (MQ=255) gTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTc < 3:93743/149‑1 (MQ=255) gTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTc < 8:2315/149‑1 (MQ=255) ccGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCa > 5:141935/1‑132 (MQ=255) ccGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCa < 6:141935/132‑1 (MQ=255) ccccATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCt > 3:65417/1‑149 (MQ=255) cccATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCt < 7:62974/148‑1 (MQ=255) cccATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTg < 6:2839/149‑1 (MQ=255) cATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGt > 2:137342/1‑122 (MQ=255) cATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGt < 1:137342/122‑1 (MQ=255) aTGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCaa < 6:338013/139‑1 (MQ=255) aTGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCaa > 5:338013/1‑139 (MQ=255) aTGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTGGcc > 6:84883/1‑149 (MQ=255) tGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTGGcct < 4:63909/149‑1 (MQ=255) agaaaGGGCCCTTCGCAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTGGccttcc > 1:108617/3‑149 (MQ=255) gaaaGGGCCCTTCGCAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTg > 4:146030/2‑141 (MQ=255) gaaaGGGCCCTTCGCAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTg < 3:146030/140‑1 (MQ=255) gggCCCTTCGCAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTc < 1:204477/113‑1 (MQ=255) gggCCCTTCGCAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTc > 2:204477/1‑113 (MQ=255) gggCCCTGCGACGGGCCCTTTCTCTATTGCGGTCCGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTGGCCTTCCTTGAg < 2:328281/149‑1 (MQ=255) gCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGAACGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTGGCCTTCCTTGAGGa > 1:116415/1‑149 (MQ=255) cccTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTGGCCTTCCTTGAGGAt > 5:206827/1‑149 (MQ=255) cGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTGGCCTTCCTTGAGGATGTCg < 8:70233/148‑1 (MQ=255) gAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTGGCCTTCCTTGAGGATGTCGGt < 3:274707/149‑1 (MQ=255) | TGCTTCTGTTATTTCCTTTTAAATCAATAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTGGCCTTCCTTGAGGATGTCGGT > NC_002947/5351835‑5352127 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |