| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,383,313 | A→C | 6.6% | intergenic (‑33/‑224) | pdhR ← / → lldP | DNA‑binding transcriptional regulator LldR/L‑lactate permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,383,313 | 0 | A | C | 6.6% | 235.7 / 6.7 | 76 | intergenic (‑33/‑224) | pdhR/lldP | DNA‑binding transcriptional regulator LldR/L‑lactate permease |
| Reads supporting (aligned to +/- strand): ref base A (34/35); new base C (2/3); total (36/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.08e-01 | |||||||||||
GCGCTCGGCCGGCAGCCGCTGCCCCGAGGTCAGCGTGCCTTCCAGAATCATCCCTTCCAGCCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAGGACAAATTGACACACCCACGGCAGCGCTTTTAACCTA > NC_002947/5383167‑5383458 | gcgcTCGGCCGGCAGCCGCTGCCCCGAGGTCAGCGTGCCTTCCAGAATCATCCCTTCCAGCCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAgg < 5:81237/149‑1 (MQ=255)gcgcTCGGCCGGCAGCCGCTGCCCCGAGGTCAGCGTGCCTTCCAGAATCATCCCTTCCAGCCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAgg < 2:237403/149‑1 (MQ=255) cgcTCGGCCGGCAGCCGCTGCCCCGAGGTCAGCGTGCCTTCCAGAATCATCCCTTCCAGCCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAggg < 1:214745/149‑1 (MQ=255) cgcTCGGCCGGCAGCCGCTGCCCCGAGGTCAGCGTGCCTTCCAGAATCATCCCTTCCAGCCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAggg < 3:66795/149‑1 (MQ=255) cTCGGCCGGCAGCCGCTGCCCCGAGGTCAGCGTGCCTTCCAGAATCATCCCTTCCAGCCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAggggg > 3:8007/1‑149 (MQ=255) cTCGGCCGGCAGCCGCTGCCCCGAGGTCAGCGTGCCTTCCAGAATCATCCCTTCCAGCCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAggggg < 7:6130/149‑1 (MQ=255) ggccggcAGCCGCTGCCCCGAGGTCAGCGTGCCTTCCAGAATCATCCCTTCCAGCCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCTGAAATTTGCCGGGGGt < 2:4650/147‑1 (MQ=255) ggccggcAGCCGCTGCCCCGAGGTCAGCGTGCCTTCCAGAATCATCCCTTCCAGCCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGt < 6:350293/147‑1 (MQ=255) gccggcAGCCGCTGCCCCGAGGTCAGCGTGCCTTCCAGAATCATCCCTTCCAGCCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCTGAAATTTGCCGGGGGtttg < 6:356064/149‑4 (MQ=255) ccggcAGCCGCTGCCCCGAGGTCAGCGTGCCTTCCAGAATCATCCCTTCCAGCCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCTGAAATTTGCCGGGGGtttgt < 1:73781/149‑5 (MQ=255) aGCCGCTGCCCCGAGGTCAGCGTGCCTTCCAGAATCATCCCTTCCAGCCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCTAATTTCTGGGGGTGCCTTTtct < 2:317574/149‑1 (MQ=255) gCCGCTGCCCCGAGGTCAGCGTGCCTTCCAGAATCATCCCTTCCAGCCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATtctc < 3:286849/149‑1 (MQ=255) cGCTGCCCCGAGGTCAGCGTGCCTTCCAGAATCATCCCTTCCAGCCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGc > 3:35312/1‑149 (MQ=255) ccccGAGGTCAGCGTGCCTTCCAGAATCATCCCTTCCAGCCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGa < 5:124300/147‑1 (MQ=255) ccccGAGGTCAGCGTGCCTTCCAGAATCATCCCTTCCAGCCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATc < 7:74114/149‑1 (MQ=255) cccGAGGTCAGCGTGCCTTCCAGAATCATCCCTTCCAGCCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCTGAAATTTGCCGGGGGtttg > 2:312112/1‑131 (MQ=255) ccGAGGTCAGCGTGCCTTCCAGAATCATCCCTTCCAGCCGATCGGCAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATc > 5:106663/1‑147 (MQ=255) ccGAGGTCAGCGTGCCTTCCAGAATCATCCCTTCCAGCCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCa < 4:8007/149‑1 (MQ=255) cGAGGTCAGCGTGCCTTCCAGAATCATCCCTTCCAGCCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAg > 4:163682/1‑149 (MQ=255) cAGCGTGCCTTCCAGAATCATCCCTTCCAGCCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACg > 8:309918/1‑149 (MQ=255) cTTCCAGAATCATCCCTTCCAACCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAg < 6:64691/110‑1 (MQ=255) cTTCCAGAATCATCCCTTCCAACCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAg > 5:64691/1‑110 (MQ=255) ttCCAGAATCATCCCTTCCAGCCGATCGACAATGTCGTCGGACACGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCAGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATACAGGACAAGCAAaaaca > 4:173267/1‑147 (MQ=255) cAGAATCATCCCTTCCAGCCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCAt < 3:163682/148‑1 (MQ=255) ccTTCCAGCCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGa < 3:173267/148‑1 (MQ=255) ccTTCCAGCCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGAt > 2:369642/1‑149 (MQ=255) cTTCCAGCCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGAtt > 5:55332/1‑149 (MQ=255) cAGCCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTcc > 4:235381/1‑149 (MQ=255) gCCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACAAGGGCTGGCCCCAACCCCCCGGCAAATTACAGGGGGTGCGTATTCTCGCCGAACAAGGCCCCCCAACCCCCCAAAAGCCCGCGATTTGcc > 1:106389/1‑149 (MQ=255) gACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATc < 8:234803/149‑1 (MQ=255) gACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATc < 4:35312/149‑1 (MQ=255) aggctcgtcgTACAGGCGCCGTGGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTc < 8:104290/132‑1 (MQ=255) gtcgGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGccc < 5:56671/148‑1 (MQ=255) tcgGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCg > 8:247236/1‑148 (MQ=255) tcgGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGc < 6:314394/149‑1 (MQ=255) gACAGGCGCCGATGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCAGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACAACCAACAAGCCCCGATATTCCCAGCACATCAGATGCCCGATCa > 6:80621/1‑149 (MQ=255) cGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTAcgc > 2:166041/1‑149 (MQ=255) gTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTAcgc > 5:95990/1‑148 (MQ=255) cTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGttt > 1:70910/1‑149 (MQ=255) cTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCATATTCTCGCCGATCCATGCCACGCAAACACCCATCAAGCCGCTATTTTCCCAGCACATCAGATGACCGCTCATCGGTACGCGACCAAAGttt > 5:158588/1‑149 (MQ=255) tGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGtttt > 6:191537/1‑149 (MQ=255) aTCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCTGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTg < 7:17338/148‑1 (MQ=255) aTCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGtttt < 5:191537/147‑1 (MQ=255) aTCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGtttt < 6:335634/147‑1 (MQ=255) aTCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGtttt < 1:369642/147‑1 (MQ=255) cAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGca > 2:227586/1‑148 (MQ=255) cAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCAACAAGCCGCGATTTTCCCCGCACAGCACAAGCCCCCACATCGGTACGCGCCCAAAGTTTTgggg > 7:234227/1‑146 (MQ=255) aaaaCAATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAg > 6:142603/1‑149 (MQ=255) aaaCCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAg > 8:33555/1‑148 (MQ=255) aCCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAGGAc < 6:95990/149‑1 (MQ=255) aTCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAGGACaaa > 4:335849/1‑149 (MQ=255) caca‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAGGACAAAtt > 6:95894/1‑149 (MQ=255) aca‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAGGACAAAtt < 5:80621/148‑1 (MQ=255) ca‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAGGACAAATTGa < 6:106663/149‑1 (MQ=255) ca‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAGGACAAATTGa < 3:235381/149‑1 (MQ=255) a‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAGGa < 1:88934/140‑1 (MQ=255) a‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAGGa > 2:88934/1‑140 (MQ=255) gCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAGGACAAATTGaca > 3:168066/1‑148 (MQ=255) cgctcCCCAACCCCCCGCCAAATTTCTGGGCGTGCCTCTTCTCCCCGAGGCACGCCACGCAAACTCCCATCCAGCCGCGATTTACCCAGCACCTCTGATGCCCGCTCTTCGGTACGCGACCAAAGTTTTGCACAGGACAAATTGacaca < 8:118296/147‑1 (MQ=255) ccACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCTCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCGGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAGGACAAATTGACACACCCa > 7:29101/1‑149 (MQ=255) taggcaCCCCCTGAAATTTGCCGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAGGACAAATTGACACACCCAc > 1:155985/6‑149 (MQ=255) cacaAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAGGACAAATTGACACACCCAc > 8:330625/1‑149 (MQ=255) acaAACCCCCGGCAAATTTCAGGGGGTGGCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAGGACAAATTGACACACCCACg > 1:208574/1‑149 (MQ=255) acaAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAGGACAAATTGACACACCCACg > 8:51700/1‑149 (MQ=255) caAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAGGACAAATTGACACACCCACgg < 4:168066/149‑1 (MQ=255) ccGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAGGACAAATTGACACACCCACGGCAGCGCt > 4:80253/1‑149 (MQ=255) ccGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAGGACAAATTGACACACCCACGGCAGCGCt > 3:309156/1‑149 (MQ=255) ccGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAGGACAAATTGACACACCCACGGCAGCGCt > 3:236035/1‑149 (MQ=255) cGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAGGACAAATTGACACACCCACGGCAGCGCtt < 7:330625/149‑1 (MQ=255) cAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAGGACAAATTGACACACCCACGGCAGCGCTTTTa < 3:335849/149‑1 (MQ=255) aaaTTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAGGACAAATTGACACACCCACGGCAGCGCTTTTaa < 2:70910/149‑1 (MQ=255) aaTTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAGGACAAATTGACACACCCACGGCAGCGCTTTTAAc < 2:208574/149‑1 (MQ=255) tttCAGGGGGTGCCTATTCTCGCCGATCCCGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAGGACAAATTGACACACCCACGGc > 8:23005/1‑135 (MQ=255) tttCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAGGACAAATTGACACACCCACGGc < 7:23005/135‑1 (MQ=255) tCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAGGACAAATTGACACACCCACGGCAGCGCTTTTAACCTa < 5:95894/148‑1 (MQ=255) tCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAGGACAAATTGACACACCCACGGCAGCGCTTTTAACCTa < 7:33555/148‑1 (MQ=255) | GCGCTCGGCCGGCAGCCGCTGCCCCGAGGTCAGCGTGCCTTCCAGAATCATCCCTTCCAGCCGATCGACAATGTCGTCGGACAGGCGCCGTTGGCGTACCTGATCAAAAACCATCACA‑‑TGCTCTCCACAAACCCCCGGCAAATTTCAGGGGGTGCCTATTCTCGCCGATCCAGGCCACGCAAACACCCATCAAGCCGCGATTTTCCCAGCACATCAGATGCCCGCTCATCGGTACGCGACCAAAGTTTTGCACAGGACAAATTGACACACCCACGGCAGCGCTTTTAACCTA > NC_002947/5383167‑5383458 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |