| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,406,056 | C→G | 5.3% | A184A (GCG→GCC) | PP_4750 ← | amino acid ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,406,056 | 0 | C | G | 5.3% | 244.0 / 3.7 | 75 | A184A (GCG→GCC) | PP_4750 | amino acid ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base C (37/34); new base G (2/2); total (39/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.73e-01 | |||||||||||
AAAGCCCTTCCACAACTCCGGCAACCATTGCATCCACATCG‑TCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCTGAGGTGGGAATGG > NC_002947/5405913‑5406195 | gaaGCCCTTCCACAACTCCGGCAACCATTGCATCCACATCG‑TCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGgt < 4:153953/148‑1 (MQ=255)aaaGCCCTTCCACAACTCCGGCAACCATTGCATCCACATCG‑TCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGTCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGgt > 3:160534/1‑149 (MQ=255)aaaGCCCTTCCACAACTCCGGCAACCATTGCATCCACATCG‑TCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGgt > 8:352607/1‑149 (MQ=255) aaGCCCTTCCACAACTCCGGCAACCATTGCATCCACATCG‑TCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGTCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGgtg < 4:160534/149‑1 (MQ=255) aaGCCCTTCCACAACTCCGGCAACCATTGCATCCACATCG‑TCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGgtg < 8:5155/149‑1 (MQ=255) cTTCCACAACTCCGGCAACCATTGCATCCACATCG‑TCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCGGCGGCGgtg > 7:272346/1‑144 (MQ=255) cTTCCACAACTCCGGCAACCATTGCATCCACATCG‑TCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCGGCGGCGgtg > 7:222719/1‑144 (MQ=255) cTTCCACAACTCCGGCAACCATTGCATCCACATCG‑TCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCGGCGGCGgtg < 8:222719/144‑1 (MQ=255) cTTCCACAACTCCGGCAACCATTGCATCCACATCG‑TCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCGGCGGCGgtg < 8:272346/144‑1 (MQ=255) cacaACTCCGGCAACCATTGCATCCACATCGTTCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCt > 1:231247/1‑149 (MQ=255) cacaACTCCGGCAACCATTGCATCCACATCG‑TCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTc < 1:358781/149‑1 (MQ=255) tCCGGCAACCATTGCATCCACATCG‑TCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGccc < 7:352607/149‑1 (MQ=255) cGGCAACCATTGCATCCACATCG‑TCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCt > 5:179995/1‑148 (MQ=255) cAACCATTGCATCCACATCG‑TCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGaaa < 3:135004/149‑1 (MQ=255) ccATTGCATCCACATCG‑TCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGt < 2:42140/149‑1 (MQ=255) ttGCATCCACATCG‑TCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCGGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTg < 3:181117/149‑1 (MQ=255) cATCCACATCG‑TCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGtttca > 7:327909/1‑145 (MQ=255) aTCCACATCG‑TCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCtgt < 3:111353/149‑1 (MQ=255) cacaTCG‑TCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGa < 7:124326/148‑1 (MQ=255) cacaTCG‑TCAGCAGTTCGCTCATAGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACAGGCACGCTGAGCACCAGGTACACCACCGACGCCGCGGGGTAGACGATCAGGCCCTGAAAGGTTTGCTgaga > 8:67153/1‑148 (MQ=255) acaTCG‑TCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAAAGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGaaa > 6:128549/1‑149 (MQ=255) aTCG‑TCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAAcc < 2:231247/149‑1 (MQ=255) tCG‑TCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCt > 8:93467/1‑149 (MQ=255) tCG‑TCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCt > 3:255927/1‑149 (MQ=255) g‑TCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTgg < 6:179995/149‑1 (MQ=255) tCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTgg > 1:241322/1‑148 (MQ=255) agcagTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGt > 5:22267/1‑147 (MQ=255) gcagTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAg > 1:197477/1‑149 (MQ=255) cagTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGc > 7:190030/1‑149 (MQ=255) gTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGACGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCTGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCt < 7:67153/149‑1 (MQ=255) ttCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCt > 3:38366/1‑148 (MQ=255) cGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGa < 4:255927/148‑1 (MQ=255) gCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCt > 1:154623/1‑127 (MQ=255) gCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCt < 2:154623/127‑1 (MQ=255) gCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGaaa < 2:197477/149‑1 (MQ=255) tCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGc > 3:41374/1‑149 (MQ=255) tCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGa < 4:41374/149‑1 (MQ=255) gggCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGAt < 5:128549/148‑1 (MQ=255) gCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTg > 2:94204/1‑128 (MQ=255) tCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCAcc > 4:358012/1‑148 (MQ=255) ccTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCaa > 7:64333/1‑149 (MQ=255) tctGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACg > 4:227678/1‑149 (MQ=255) tttCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCaa > 8:259622/1‑149 (MQ=255) ttCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCaa < 3:227678/148‑1 (MQ=255) ttCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAAt > 3:48697/1‑149 (MQ=255) aCGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAAtcgtc < 6:22267/149‑1 (MQ=255) tGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAg < 7:93467/149‑1 (MQ=255) gCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGc < 3:358012/149‑1 (MQ=255) aGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGc > 7:63015/1‑149 (MQ=255) cAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATTGTCGAGGCCACGGcc > 6:83510/1‑147 (MQ=255) cAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGcc > 3:38545/1‑147 (MQ=255) aaCGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAg < 2:241322/149‑1 (MQ=255) gagagaACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAgg > 8:70954/1‑135 (MQ=255) gagagaACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAgg < 7:70954/135‑1 (MQ=255) gagaACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCtt < 8:63015/149‑1 (MQ=255) gaACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGa < 7:259622/149‑1 (MQ=255) ggCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAg > 3:94474/1‑147 (MQ=255) ggCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAg < 4:94474/147‑1 (MQ=255) tGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAg < 1:230494/141‑1 (MQ=255) tGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAg > 2:230494/1‑141 (MQ=255) aCGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAAGCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCg > 5:231153/1‑147 (MQ=255) aCGCAGAGCACCGCGTACACCACCGCCGCCCCCCTGTAGACGCTCAGGCCCTGAAAGGTATGCACTCAAACCTGGTAACCCTGAAAGCAGATTTCACCAACGCCAATCCTCGAGGCCACCGCCGAGACCAAGACCAGGCCacagccg > 2:278292/1‑141 (MQ=255) tGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTg > 3:56579/1‑70 (MQ=255) tGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTg < 4:56579/70‑1 (MQ=255) cACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAgg > 6:69445/1‑143 (MQ=255) cACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAgg < 5:69445/143‑1 (MQ=255) cACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCt > 4:204727/1‑148 (MQ=255) cAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCTGAgg > 8:81043/1‑149 (MQ=255) cAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCTGAgg > 8:86172/1‑149 (MQ=255) caccacCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCTGAGGTGGGaa < 8:64333/149‑1 (MQ=255) accaccGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCTGAGGTGGGAAt < 7:86172/149‑1 (MQ=255) accaccGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCTGAGGTGGGAAt < 7:81043/149‑1 (MQ=255) caccGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCACCGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCTGAGGTGGGAATgg > 7:355867/1‑149 (MQ=255) caccGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCTGAGGTGGGAATgg < 8:190030/149‑1 (MQ=255) caccGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCTGAGGTGGGAATgg > 4:300616/1‑149 (MQ=255) ccgcGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCTGAGGTgg > 6:198019/1‑135 (MQ=255) ccgcGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGACTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCTGAGGTgg < 5:198019/135‑1 (MQ=255) | AAAGCCCTTCCACAACTCCGGCAACCATTGCATCCACATCG‑TCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTCAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCTGAGGTGGGAATGG > NC_002947/5405913‑5406195 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |