| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,462,394 | G→C | 8.7% | intergenic (+17/+17) | PP_4798 → / ← PP_4799 | membrane‑bound lytic murein transglycosylase/muramoyltetrapeptide carboxypeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,462,394 | 0 | G | C | 8.7% | 211.6 / 6.9 | 68 | intergenic (+17/+17) | PP_4798/PP_4799 | membrane‑bound lytic murein transglycosylase/muramoyltetrapeptide carboxypeptidase |
| Reads supporting (aligned to +/- strand): ref base G (32/30); new base C (3/3); total (35/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGCTGCGCCAACCCGCCAGCACCGGCA > NC_002947/5462250‑5462538 | cGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTgcgc < 6:199713/148‑1 (MQ=255) gCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCgg > 1:329457/1‑148 (MQ=255) ccGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGt < 8:3541/148‑1 (MQ=255) cGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTaa > 7:43569/1‑149 (MQ=255) tGGCATTATCGGGGCCAATACCCGCAAGCCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAAtct > 2:81290/1‑149 (MQ=255) aTTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCGCAGCGGccc > 6:305696/1‑136 (MQ=255) aTTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCGCAGCGGccc < 5:305696/136‑1 (MQ=255) tCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCgg > 5:270400/1‑135 (MQ=255) tCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCgg < 6:270400/135‑1 (MQ=255) gCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGaa > 5:365426/1‑147 (MQ=255) ccAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGaa > 3:267388/1‑146 (MQ=255) aaTACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCGCAGCGGCCCCggaa < 1:254238/129‑3 (MQ=255) aaTACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCGCAGCGGCCCCggaa > 2:254238/1‑127 (MQ=255) aTACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATc > 6:207060/1‑149 (MQ=255) ccGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTg < 1:81290/149‑1 (MQ=255) ccGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAAc < 4:216423/140‑1 (MQ=255) ccGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAAc > 3:216423/1‑140 (MQ=255) ccGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGc < 8:43569/149‑1 (MQ=255) ccGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCACCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTg > 6:53452/1‑148 (MQ=255) gCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGAGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTc > 1:355293/1‑149 (MQ=255) aaGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCa < 3:149221/149‑1 (MQ=255) gCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCa > 3:115807/1‑149 (MQ=255) gCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAgtgt > 2:131491/1‑149 (MQ=255) aaTGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCAGCGCGGCCCCGGTAAACGCACGCCCAGAACAGATACTTCTCCAGCACCAGTGttt > 2:130108/1‑149 (MQ=255) cccAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACACACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCt > 4:355777/1‑148 (MQ=255) ccATCAAGGGCGTGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGa < 8:131131/149‑1 (MQ=255) ccAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGaa < 8:259624/118‑1 (MQ=255) aGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCACCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAac < 5:53452/149‑1 (MQ=255) gggCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGt < 5:207060/149‑1 (MQ=255) ggCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTc > 3:308509/1‑149 (MQ=255) gCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTc > 2:267361/1‑148 (MQ=255) cTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCa < 7:276930/149‑1 (MQ=255) tGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACTCTGTCCAg < 4:115807/149‑1 (MQ=255) gCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCAc < 1:130108/148‑1 (MQ=255) ccGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAgt < 5:53954/121‑1 (MQ=255) ccGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAgt > 6:53954/1‑121 (MQ=255) cggcggATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCAccc > 6:352138/1‑148 (MQ=255) cggcggATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCAccc > 2:301713/1‑148 (MQ=255) gCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAg > 3:139382/1‑149 (MQ=255) tACTCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAggg < 1:131491/149‑1 (MQ=255) aCCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAgggg > 7:344337/1‑149 (MQ=255) cccGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAggg < 4:267388/147‑1 (MQ=255) ccGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCa < 2:329457/149‑1 (MQ=255) cGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCaa < 5:352138/149‑1 (MQ=255) aCCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGc < 2:355293/149‑1 (MQ=255) cccACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCa < 7:273550/149‑1 (MQ=255) cacaAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCACTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCAt > 8:19707/1‑148 (MQ=255) aaGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACAt < 5:161370/149‑1 (MQ=255) gctgctTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCACACCCCCAGCACAGATCCTGCTCCAGCAACAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTc > 1:269746/1‑149 (MQ=255) gctTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCggg < 1:301713/149‑1 (MQ=255) ctTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCggg < 4:308509/148‑1 (MQ=255) ctTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCgg < 8:199869/147‑1 (MQ=255) ctTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCgg < 1:267361/147‑1 (MQ=255) tGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGccc > 4:361292/1‑149 (MQ=255) gcgcCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGccc < 2:156331/148‑1 (MQ=255) gcgcCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGccc > 1:156331/1‑148 (MQ=255) gcCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGCt < 4:139382/149‑1 (MQ=255) cagcagTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGCTgc > 5:346008/1‑149 (MQ=255) cagTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCgg > 6:304595/1‑129 (MQ=255) cagTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCgg < 5:304595/129‑1 (MQ=255) cagTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGCTgagc > 5:179609/1‑148 (MQ=255) agTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGCTGCGcc > 1:133657/1‑148 (MQ=255) tt‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGCTGCGCCAACCCGCCa > 2:18783/1‑149 (MQ=255) ggggCCGCGCAGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGCTg < 1:316700/132‑1 (MQ=255) ggggCCGCGCAGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGCTg > 2:316700/1‑132 (MQ=255) ggCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGCTGCGCCAACCCGCCAGCACCg < 6:365426/149‑1 (MQ=255) cGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGCTGCGCCAACCCGCCCGCACCGGca > 4:200948/1‑149 (MQ=255) gCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGCTGCGCCAACCCGc > 6:182216/1‑137 (MQ=255) gCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGCTGCGCCAACCCGc < 5:182216/137‑1 (MQ=255) | CGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATT‑CCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGCTGCGCCAACCCGCCAGCACCGGCA > NC_002947/5462250‑5462538 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |