Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	5,586,533	G→A	7.4%	G251G (GGC→GGT)	PP_4914 ←	phytase‑like protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	5,586,533	0	G	A	7.4%	199.9 / 3.8	67	G251G (GGC→GGT)	PP_4914	phytase‑like protein
Reads supporting (aligned to +/- strand):  ref base G (34/28);  new base A (3/2);  total (37/30)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.50e-01

CCAGTGCTTCGGCCAGGCCAAACGGCTGCGCGTAGCGCCGTGACTCGACCAGCGCATCAGCAGCGAACGACCAGCAACGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTCAGCAGCACGCAACCACGCCCGCAGGTCCAGACCGACTGCTGGCGCTCGATGGCCAC  >  NC_002947/5586385‑5586679                                                                                                                                                     |                                                                                                                                                   ccAGTGCTTCGGCCAGGCCAAACGGCTGCGCGTAGCGCCGTGACTCGACCAGCGCATCAGCAGCGAACGACCAGCAACGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTg                                                                                                                                                    >  2:183818/1‑149 (MQ=255)    gTGCTTCGGCCAGGCCAAACGGCTGCGCGTAGCACCGTGACTCGACCAGCGCATCAGCAGCGAACGACCAGCAACGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGccc                                                                                                                                                 >  7:254824/1‑149 (MQ=255)      gCTTCGGCCAGGCCAAACGGCTGCGCGTAGCGCCGTGACTCGACCAGCGCATCAGCAGCGAACGACCAGCAACGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCt                                                                                                                                                <  2:270600/148‑1 (MQ=255)        ttCGGCCAGGCCAAACGGCTGCGCGTAGCGCCGTGACTCGACCAGCGCATCAGCAGCGAACGACCAGCAACGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCg                                                                                                                                              >  3:214694/1‑148 (MQ=255)         tCGGCCAGGCCAAACGGCTGCGCGTAGCGCCGTGACTCGACCAGCGCATCAGCAGCGAACGACCAGCAACGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGaa                                                                                                                                            >  7:8449/1‑149 (MQ=255)          cGGCCAGGCCAAACGGCTGCGCGTAGCGCCGTGACTCGACCAGCGCATCAGCAGCGAACGACCAGCAACGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGa                                                                                                                                             <  6:316592/147‑1 (MQ=255)             ccaggccaAACGGCTGCGCGTAGCGCCGTGACTCGACCAGCGCATCAGCAGCGAACGACCAGCAACGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAAccag                                                                                                                                        >  4:298053/1‑149 (MQ=255)                 gccaAACGGCTGCGCGTAGCGCCGTGACTCGACCAGCGCATCAGCAGCGAACGACCAGCAACGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAAccaggc                                                                                                                                      >  4:116931/1‑147 (MQ=255)                  ccaAACGGCTGCGCGTAGCGCCGTGACTCGACCAGCGCATCAGCAGCGAACGACCAGCAACGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAAccaggccag                                                                                                                                   <  4:243502/149‑1 (MQ=255)                     aaCGGCTGCGCGTAGCGCCGTGACTCGACCAGCGCATCAGCAGCGAACGACCAGCAACGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTc                                                                                                                                <  3:116931/149‑1 (MQ=255)                      aCGGCTGCGCGTAGCGCCGTGACTCGACCAGCGCATCAGCAGCGAACGACCAGCAACGCTCGACCTTGCCACTGTCGACATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCg                                                                                                                                              >  2:2331/1‑134 (MQ=255)                      aCGGCTGCGCGTAGCGCCGTGACTCGACCAGCGCATCAGCAGCGAACGACCAGCAACGCTCGACCTTGCCACTGTCGACATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCg                                                                                                                                              <  1:2331/134‑1 (MQ=255)                        ggCTGCGCGTAGCGCCGTGACTCGACCAGCGCATCAGCAGCGAACGACCAGCAACGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGTGTAAACAGCTTGCCCTCGAACCAGGCCAGTTCAGc                                                                                                                             <  8:8449/149‑1 (MQ=255)                          cTGCGCGTAGCGCCGTGACTCGACCAGCGCATCAGCAGCGAACGACCAGCAACGCTCGACCTTGCCACTGGCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGa                                                                                                                           <  7:340644/149‑1 (MQ=255)                                  aGCGCCGTGACTCGACCAGCGCATCAGCAGCGAACGACCAGCAACGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTcgcgc                                                                                                                   >  2:321852/1‑149 (MQ=255)                                     accGTGACTCGACCAGCGCATCAGCAGCGAACGACCAGCAACGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGAc                                                                                                                <  8:254824/148‑1 (MQ=255)                                           aCTCGACCAGCGCATCAGCAGCGAACGACCAGCAACGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCTGGCCAGGTCAGCGaa                                                                                                                          <  7:135638/133‑1 (MQ=255)                                           aCTCGACCAGCGCATCAGCAGCGAACGACCAGCAACGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTAGAGGGTAAACAGCTTGCCCTCGAACCTGGCCAGGTCAGCGaa                                                                                                                          >  8:135638/1‑133 (MQ=255)                                             tCGACCAGCGCATCAGCAGCGAACGACCAGCAACGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCt                                                                                                        >  7:46855/1‑149 (MQ=255)                                             tCGACCAGCGCATCAGCAGCGAACGACCAGCAACGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCt                                                                                                        >  7:300622/1‑149 (MQ=255)                                                    gcgcATCAGCAGCGAACGACCAGCAACGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTg                                                                                                 <  8:46855/149‑1 (MQ=255)                                                    gcgcATCAGCAGCGAACGACCAGCAACGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTg                                                                                                 <  1:183818/149‑1 (MQ=255)                                                     cgcATCAGCAGCGAACGACCAGCAACGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTgg                                                                                                <  3:298053/149‑1 (MQ=255)                                                        aTCAGCAGCGAACGACCAGCAACGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCa                                                                                             >  1:322715/1‑149 (MQ=255)                                                                 gAACGACCAGCAACGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCgg                                                                                    <  1:66007/149‑1 (MQ=255)                                                                       ccAGCAACGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCt                                                                                          <  2:276968/137‑1 (MQ=255)                                                                       ccAGCAACGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCt                                                                                          >  1:276968/1‑137 (MQ=255)                                                                        cAGCAACGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCAt                                                                             >  6:143198/1‑149 (MQ=255)                                                                          gCAACGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCAttt                                                                           <  1:310175/149‑1 (MQ=255)                                                                              cGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGAc                                                                       >  7:192777/1‑149 (MQ=255)                                                                               gCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGAcc                                                                      >  7:151579/1‑149 (MQ=255)                                                                                         gCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTc                                                              <  4:214694/147‑1 (MQ=255)                                                                                         gCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGc                                                            >  6:103703/1‑149 (MQ=255)                                                                                           cACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTGAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCAttt                                                                           <  7:340383/132‑1 (MQ=255)                                                                                           cACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCAttt                                                                           >  8:340383/1‑132 (MQ=255)                                                                                           cACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTc                                                          <  6:89981/149‑1 (MQ=255)                                                                                                tCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTcagcag                                                     >  2:188267/1‑149 (MQ=255)                                                                                                tCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTcagc                                                       <  5:143198/147‑1 (MQ=255)                                                                                                  gATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCTCCCCCCGCCTCGCTCAgcagca                                                   >  6:195565/1‑149 (MQ=255)                                                                                                  gATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTCAgcagca                                                   >  6:363788/1‑149 (MQ=255)                                                                                                  gATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTCAgcagca                                                   >  6:358616/1‑149 (MQ=255)                                                                                                     atCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGAcc                                                                      <  7:162658/127‑1 (MQ=255)                                                                                                     atCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGAcc                                                                      >  8:162658/1‑127 (MQ=255)                                                                                                        aCGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTCAGCAGCACGCaa                                              <  1:321852/148‑1 (MQ=255)                                                                                                        aCGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTCAGCAGCACGCAAc                                             <  2:322715/149‑1 (MQ=255)                                                                                                        aCGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTCAGCAGCACGCAAc                                             >  8:121256/1‑149 (MQ=255)                                                                                                              gCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTCAGCAGCACGCAACCACGcc                                       >  4:14544/1‑149 (MQ=255)                                                                                                               cacaCCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTCAGCAGCACGCAACCACGccc                                      <  3:49594/149‑1 (MQ=255)                                                                                                                acacCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTCAGCAGCACGCAACCACGCCCg                                     >  5:179422/1‑149 (MQ=255)                                                                                                                acacCCGGTACGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTCAGCAGCACGCAACCACGCCCg                                     >  5:85484/1‑149 (MQ=255)                                                                                                                    ccGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTCAGCAGCACGCAACCACGCCCGCAgg                                 >  1:269792/1‑149 (MQ=255)                                                                                                                       gTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTCAGCAGCACGCAACCACGCCCGCAGGTcc                              <  3:14544/149‑1 (MQ=255)                                                                                                                             gTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTCAGCAGCACGCAACCACGCCCGCAGGTCCAGACCg                        <  5:103703/149‑1 (MQ=255)                                                                                                                              ttACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTCAGCAGCACGCAACCACGCCCGCAGGTCCAGACCGa                       >  1:215308/1‑149 (MQ=255)                                                                                                                                tggTTCGAGGGCAAGCTGTTTACCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTCAGCAGCACGCAACCACGCCCGCAGGTCCAGa                           <  7:243140/141‑1 (MQ=255)                                                                                                                                tggTTCGAGGGCAAGCTGTTTACCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTCAGCAGCACGCAACCACGCCCGCAGGTCCAGa                           >  8:243140/3‑143 (MQ=255)                                                                                                                                 cGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTCAGCAGCACGCAACCACGCCCGCAGGTCCAGACCGActg                    >  6:14315/1‑149 (MQ=255)                                                                                                                                  gTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTCAGCAGCACGCAACCACGCCCGCAGGTCCAGACCGActgc                   >  2:235809/1‑149 (MQ=255)                                                                                                                                   ttCGAGGGCAAGCTGTTTACCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTCAGCAGCACGCAACCACGCCCGCAGGTCCAGACCGActgct                  >  8:210399/1‑149 (MQ=255)                                                                                                                                   ttCGAGGGCAAGCTGTTTACCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCT‑GCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTcagca                                                      >  4:357987/1‑112 (MQ=38)                                                                                                                                   ttCGAGGGCAAGCTGTTTACCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCT‑GCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTcagca                                                      <  3:357987/112‑1 (MQ=38)                                                                                                                                     cGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTCAGCAGCACGCAACCACGCCCGCAGGTCCAGACCGACTGCTgg                >  3:37614/1‑149 (MQ=255)                                                                                                                                      gAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTCAGCAGCACGCAACCACGCCCGCAGGTCCAGACCGACTGCTgg                <  2:215308/148‑1 (MQ=255)                                                                                                                                      gAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTCAGCAGCACGCAACCACGCCCGCAGGTCCAGACCGACTGCTGgc               >  3:346172/1‑149 (MQ=255)                                                                                                                                          gTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTCAGCAGCACGCAACCACGCCCGCAGGTCCAGACCGACTGCTGGCGCTc           <  5:14315/149‑1 (MQ=255)                                                                                                                                          gTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACACGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCACCGCCTCGCTCAGCAGCACGCAACCACGCCCGCAGGTCCAGACCGACTGCTGGCGCTc           >  1:290025/1‑149 (MQ=255)                                                                                                                                           tAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTCAGCAGCACGCAACCACGCCCGCAGGTCCAGACCGACTGCTGGCGCTc           >  5:38598/1‑148 (MQ=255)                                                                                                                                               cAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTCAGCAGCACGCAACCACGCCCGCAGGTCCAGACCGACTGCTGGCGCTCGATgg      <  8:300622/149‑1 (MQ=255)                                                                                                                                                     gCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTCAGCAGCACGCAACCACGCCCGCAGGTCCAGACCGACTGCTGGCGCTCGATGGccac  <  7:121256/147‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   CCAGTGCTTCGGCCAGGCCAAACGGCTGCGCGTAGCGCCGTGACTCGACCAGCGCATCAGCAGCGAACGACCAGCAACGCTCGACCTTGCCACTGTCGATATCACGTCGGCACACCCGGTAGGCGTTACGTTCGAGGGTAAACAGCTTGCCCTCGAACCAGGCCAGGTCAGCGAAGTCGCGCGACAGGGCCCTGGCATTGGGCATCTGCGCGGGTTGCATTTCGACCCCCGCCTCGCTCAGCAGCACGCAACCACGCCCGCAGGTCCAGACCGACTGCTGGCGCTCGATGGCCAC  >  NC_002947/5586385‑5586679

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑