Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,657,894 T→G 11.7% intergenic (‑200/‑52) tktA ← / → sahR transketolase A/methionine metabolism transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,657,8940TG11.7% 158.0 / 11.8 59intergenic (‑200/‑52)tktA/sahRtransketolase A/methionine metabolism transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base T (21/31);  new base G (5/2);  total (26/33)
Fisher's exact test for biased strand distribution p-value = 2.23e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CGCCCACTGGGGGCGCTTGGGGCAAACATTTAAGCGCCAAGCGCCGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGACTGCCGCCCCATGAATCTGCGTGCGCAATCGATCCCCGAGCAACGCGAAACATTGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTG  >  NC_002947/5657750‑5658038
                                                                                                                                                  |                                                                                                                                                
cGCCCACTGGGGGCGCTTGGGGCAAACATTTAAGCGCCAAGCGCCGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACtttt                                                                                                                                               <  4:318721/148‑1 (MQ=255)
cGCCCACTGGGGGCGCTTGGGGCAAACATTTAAGCGCCAAGCGCCGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACtttt                                                                                                                                               <  8:246039/148‑1 (MQ=255)
 gCCCACTGGGGGCGCTTGGGGCAAACATTTAAGCGCCAAGCGCCGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAAAGTTTTg                                                                                                                                             <  3:349723/149‑1 (MQ=255)
  cccACTGGGGGCGCTTGGGGCAAACATTTAAGCGCCAAGCGCCGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGa                                                                                                                                            >  2:78273/1‑149 (MQ=255)
     aCTGGGGGCGCTTGGGGCAAACATTTAAGCGCCAAGCGCCGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGatat                                                                                                                                         >  1:125074/1‑149 (MQ=255)
         ggggCGCTTGGGGCAAACATTTAAGCGCCAAGCGCCGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTg                                                                                                                                       <  6:28257/147‑1 (MQ=255)
         ggggCGCTTGGGGCAAACATTTAAGCGCCAAGCGCCGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGc                                                                                                                                     >  2:110213/1‑149 (MQ=255)
         ggggCGCTTGGGGCAAACATTTAAGCGCCAAGCGCCGGCTTTAAGCCGCAAATTAAGAAGCACAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTg                                                                                                                                       <  1:77058/148‑1 (MQ=255)
               cTTGGGGCAAACATTTAAGCGCCAAGCGCCGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTCGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTgtt                                                                                                                               <  5:243576/149‑3 (MQ=255)
                   gggCAAACATTTAAGCGCCAAGCGCCGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAggg                                                                                                                           <  5:138643/149‑1 (MQ=255)
                   gggCAAACATTTAAGCGCCAAGCGCCGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAgg                                                                                                                            <  1:144663/148‑1 (MQ=255)
                     gCAAACATTTAAGCGCCAAGCGCCGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCAGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAggg                                                                                                                           >  1:101426/1‑148 (MQ=255)
                      cAAACATTTAAGCGCCAAGCGCCGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCAt                                                                                                                        >  8:24107/1‑149 (MQ=255)
                           aTTTAAGCGCCAAGCGCCGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGata                                                                                                                                          >  2:88739/1‑126 (MQ=255)
                           aTTTAAGCGCCAAGCGCCGGCTTTAAGACGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGata                                                                                                                                          <  1:88739/126‑1 (MQ=255)
                            tttAAGCGCCAAGCGCCGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGc                                                                                                                  <  2:246161/149‑1 (MQ=255)
                             ttAAGCGCCAAGCGCCGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAAAGTTTTGATATTg                                                                                                                                       >  5:163650/1‑127 (MQ=255)
                             ttAAGCGCCAAGCGCCGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAAAGTTTTGATATTg                                                                                                                                       <  6:163650/127‑1 (MQ=255)
                                  cgccaagcgccGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCt                                                                                                            <  7:24107/149‑1 (MQ=255)
                                  cgccaagcgccGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCt                                                                                                            <  1:78273/149‑1 (MQ=255)
                                   gccaagcgccGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTa                                                                                                           <  5:161808/149‑1 (MQ=255)
                                   accaagcgccGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCt                                                                                                                >  2:5505/2‑144 (MQ=255)
                                   accaagcgccGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCt                                                                                                                <  1:5505/143‑1 (MQ=255)
                                     caagcgccGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGa                                                                                                         <  3:141603/149‑1 (MQ=255)
                                     caagcgccGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGa                                                                                                         <  6:244074/149‑1 (MQ=255)
                                      aagcgccGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCtt                                                                                                                                  <  5:234246/123‑1 (MQ=255)
                                      aagcgccGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCtt                                                                                                                                  >  6:234246/1‑123 (MQ=255)
                                      aagcgccGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGAc                                                                                                        <  6:38705/149‑1 (MQ=255)
                                          gccGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGACTgcc                                                                                                    >  4:84334/1‑149 (MQ=255)
                                                     gCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGACTGCCGCCCCATGaa                                                                                          >  7:265115/1‑148 (MQ=255)
                                                       cGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAACACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGACTGCCGCCCCATGAATCt                                                                                       <  2:309296/149‑1 (MQ=255)
                                                            cTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGAt                                                                                                                    <  4:137226/115‑1 (MQ=255)
                                                            cTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGAt                                                                                                                    >  3:137226/1‑115 (MQ=255)
                                                               aagaagCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCGAAACGTTTTGATATTGGCGTTGCTAGGGCATCGATGCCTGTCTAGACTGGCGCCCCGTGCATCtgcgtggg                                                                                >  4:350251/1‑146 (MQ=255)
                                                                 gaagCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGACTGCCGCCCCATGAATCTGCGTGCGCaa                                                                             >  3:328554/1‑149 (MQ=255)
                                                                       gagCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGACTGCCGCCCCATGAATCTGCGTGCGCAATCGATc                                                                       <  8:77776/149‑1 (MQ=255)
                                                                       gagCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGACTGCAGCCCCATGAATCTGCGTGCGCAATCGATc                                                                       >  8:83908/1‑149 (MQ=255)
                                                                        agCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGACTGCCGCCCCATGAATCTGCGTGCGCAATCGATcc                                                                      >  7:218577/1‑149 (MQ=255)
                                                                          cgcgACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGACTGCCGCCCCATGAATCTGCGTGCGCAATCGATcccc                                                                    <  8:265115/149‑1 (MQ=255)
                                                                          cgcgACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGACTGCCGCCCCATGAATCTGCGTGCGCAATCGATcccc                                                                    <  2:101426/149‑1 (MQ=255)
                                                                              gACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGACTGCCGCCCCATGAATCTGCGTGCGCAATCGATCCCCGAg                                                                 >  7:248553/1‑149 (MQ=255)
                                                                                    gggCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGACTGCCGCCCCATGAATCTGCGTGCGCAATCGATCCCCGAGCAAcgc                                                           <  1:110213/149‑1 (MQ=255)
                                                                                     ggCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGACTGCCGCCCCATGAATCTGCGTGCGCAATCGATCCCCGAGCAAcgcg                                                          <  4:175652/149‑1 (MQ=255)
                                                                                        gcCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTg                                                                                                                                       <  4:227869/69‑1 (MQ=255)
                                                                                        gcCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTg                                                                                                                                       >  3:227869/1‑69 (MQ=255)
                                                                                           ccAAAGCGTGTAACCTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGACTGCCGCCCCATGAATCTGCGTGCGCAATCGATCCCCGAGCAACGCGAAACAt                                                    >  4:74247/1‑149 (MQ=255)
                                                                                            cAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGACTGCCGCCCCATGAATCTGCGTGCGCAATCGATcccc                                                                    >  3:116855/1‑132 (MQ=255)
                                                                                            cAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGACTGCCGCCCCATGAATCTGCGTGCGCAATCGATcccc                                                                    <  4:116855/132‑1 (MQ=255)
                                                                                             aaaGCGTGTAACCTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGACTGCCGCCCCATGAATCTGCGTGCGCAATCGATCCCCGAGCAACGCGAAACATTg                                                  <  3:74247/149‑1 (MQ=255)
                                                                                                gCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGACTGCCGCCCCATGAATCTGCGTGCGCAATCGATCCCCGAGCAACGCGAAACATTGGCa                                               <  3:84334/149‑1 (MQ=255)
                                                                                                       aCTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGACTGCCGCCCCATGAATCTGCGTGCGCAATCGATCCCCGAGCAAcgcg                                                          >  7:277056/1‑131 (MQ=255)
                                                                                                       aCTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGACTGCCGCCCCATGAATCTGCGTGCGCAATCGATCCCCGAGCAAcgcg                                                          <  8:277056/131‑1 (MQ=255)
                                                                                                              gCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGACTGCCGCCCCATGAATCTGCGTGCGCAATCGATCCCCGAGCAACGCGAAACATTGGCAGCCCTGTGCAAAGc                                 <  2:125074/149‑1 (MQ=255)
                                                                                                                                   ggCCAATATCAAAAAGTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGACTGCCGCCCCATGAATCTGCGTGCGCAATCGATCCCCGAGCAACGCGAAACATTGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGcc             >  4:206736/2‑149 (MQ=255)
                                                                                                                                     ccAATATCAAAAAGTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGACTGCCGCCCCATGAATCTGCGTGCGCAATCGATCCCCGAGCAACGCGAAACATTGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCt            >  1:254414/1‑148 (MQ=255)
                                                                                                                                     ccAATATCAAAAAGTTTTGAAATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGACTGCCGCCCCATGAATCTGCGTGCGCAATCGATCCCCGAGCAACGCGAAACATTGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCt            >  8:246813/1‑148 (MQ=255)
                                                                                                                                        aaatCAAACCTTTTTGATATTGGCCTTGCTAGGGCCTCGTTGGCTGTCTAGACTGCCGGCCCTTGAATCTGCGTGCGCAATCGATCCCCGAGCAACGCGAAACATTGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAAc        <  2:332922/147‑1 (MQ=255)
                                                                                                                                            cAAAACTTTTTGATAATGCCCTTGCTAGGGCAACGATGCCTGTCTAGACAGCCGCCCCATGAATCTGCGTGCGCAATAGATCCCCGAGCAACGCGAAACATTGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTAt    >  1:72742/1‑149 (MQ=255)
                                                                                                                                             aaaaCTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGACTGCCGCCCCATGAATCTGCGTGCGCAATCGATCCCCGAGCAACGCGAAACATTGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTAtt   <  8:218577/149‑1 (MQ=255)
                                                                                                                                              aaaCTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGACTGCCGCCCCATGAATCTGCGTGCGCAATCGATCCCCGAGCAACGCGAAACATTGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTg  <  3:350251/149‑1 (MQ=255)
                                                                                                                                              aaaCTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGACTGCCGCCCCATGAATCTGCGTGCGCAATCGATCCCCGAGCAACGCGAAACATTGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTg  >  2:311434/1‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                
CGCCCACTGGGGGCGCTTGGGGCAAACATTTAAGCGCCAAGCGCCGGCTTTAAGCCGCAACTGAAGAAGCAGAGCGCGACTCGGGGCGCCCCAAAGCGTGTAACTTGAGGCTTTCGGCTTGCAGCTCATCGCCAATATCAAAACTTTTTGATATTGGCCTTGCTAGGGCATCGATGCCTGTCTAGACTGCCGCCCCATGAATCTGCGTGCGCAATCGATCCCCGAGCAACGCGAAACATTGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTG  >  NC_002947/5657750‑5658038

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: