Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,763,637 A→C 7.4% K338T (AAG→ACG) ‡ PP_5057 → M23/M37 family peptidase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,763,6370AC 7.4% 201.4 / 7.1 68K338T (AAG→ACG) ‡PP_5057M23/M37 family peptidase
Reads supporting (aligned to +/- strand):  ref base A (30/33);  new base C (2/3);  total (32/36)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.91e-01

GCCCGTACCACCCTCGGGCCGATGGTTTCCAGCGATGGCGCCAACTACGGCGGCGCATTTTCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGACTGGTTGCGCGGTGCCGGGCTTCTGGTCATTCTCGACCATGGCAACGGTTACCTGAGCCTGTACGGCCA  >  NC_002947/5763489‑5763784
                                                                                                                                                     |                                                                                                                                                   
gCCCGTACCACCCTCGGGCCGATGGTTTCCAGCGATGGCGCCAACTACGGCGGCGCATTTTCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCaa                                                                                                                                                     <  5:256214/149‑1 (MQ=255)
        caccCTCGGGCCGATGGTTTCCAGCGATGGCGCCAACTACGGCGGCGCATTTTCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACg                                                                                                                                             >  3:14449/1‑149 (MQ=255)
          cccTCGGGCCGATGGTTTCCAGCGATGGCGCCAACTACGGCGGCGCATTTTCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTCCCACTTGGCACggg                                                                                                                                           <  8:23924/149‑1 (MQ=255)
           ccTCGGGCCGATGGTTTCCAGCGATGGCGCCAACTACGGCGGCGCATTTTCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACgggg                                                                                                                                          <  4:7247/149‑1 (MQ=255)
             tCGGGCCGATGGTTTCCAGCGATGGCGCCAACTACGGCGGCGCATTTTCTGCTGCGCGGGAACAAAATTCCATGGCCAGGCAATGGTCGATTGGTGGCACGTTTCGGTGTTGCCCGGGGTTGCGACCCCCGGGCCAATTGGGACGGGGt                                                                                                                                         >  1:106721/1‑149 (MQ=255)
              cggtactaTGTTTTCCAGCGATCGCTCAATCTTCCTCGGCGTATTTCCTCCTGCGCGGGGCAAACTTCCATTTCCTGCCAATGTTCTATTGTTGGTATGTTTCGGGGATTCCCGCGGTAGCGACGCTCGTGCCAAGTGTTACGTGGTTa                                                                                                                                       <  8:234844/142‑1 (MQ=255)
              cGGGCCGATGGTTTCCAGCGATGGCGCCAACTACGGCGGCGCATTTTCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTa                                                                                                                                       >  3:23977/1‑149 (MQ=255)
                   cGATGGTTTCCAGCGATGGCGCCAACTACGGCGGCGCATTTTCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGAt                                                                                                                                   >  7:333101/1‑148 (MQ=255)
                   cGATGGTTTCCAGCGATGGCGCCAACTACGGCGGCGCATTTTCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTCCCACTTGGCACgggcgtc                                                                                                                                       >  5:182882/1‑140 (MQ=255)
                   cGATGGTTTCCAGCGATGGCGCCAACTACGGCGGCGCATTTTCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTCCCACTTGGCACgggcgtc                                                                                                                                       <  6:182882/144‑5 (MQ=255)
                        gTTTCCAGCGATGGCGCCAACTACGGCGGCGCATTTTCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAgcgc                                                                                                                             >  5:234431/1‑149 (MQ=255)
                         tttCCAGCGATGGCGCCAACTACGGCGGCGCATTTTCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGAAGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAgcgc                                                                                                                             >  2:100061/1‑148 (MQ=255)
                             cAGCGATGGCGCCAACTACGGCGGCGCATTTTCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAgc                                                                                                                               >  2:248480/1‑142 (MQ=255)
                             cAGCGATGGCGCCAACTACGGCGGCGCATTTTCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAgc                                                                                                                               <  1:248480/142‑1 (MQ=255)
                              aGCGATGGCGCCAACTACGGCGGCGCATTTTCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAAccc                                                                                                                       <  5:238534/149‑1 (MQ=255)
                                cGATGGCGCCAACTACGGCGGCGCATTTTCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAg                                                                                                                     <  5:113304/149‑1 (MQ=255)
                                  aTGGCGCCAACTACGGCGGCGCATTTTCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGc                                                                                                                   <  4:23977/149‑1 (MQ=255)
                                   tGGCGCCAACTACGGCGGCGCATTTTCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCa                                                                                                                  <  6:234431/149‑1 (MQ=255)
                                    ggCGCCAACTACGGCGGCGCATTTTCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCAc                                                                                                                 >  3:114826/1‑149 (MQ=255)
                                        ccAACTACGGCGGCGCATTTTCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAg                                                                                                             >  2:335740/1‑149 (MQ=255)
                                         cAACTACGGCGGCGCATTTTCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACTGGGTTATGATCAGCGCCAACCCAGGCACCCAgg                                                                                                            <  4:221514/149‑1 (MQ=255)
                                         cAACTACGGCGGCGCATTTTCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAgg                                                                                                            >  8:174786/1‑149 (MQ=255)
                                         cAACTACGGCGGCGCATTTTCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTCCCACTTGGCACgg                                                                                                                                            >  4:99589/1‑117 (MQ=255)
                                         cAACTACGGCGGCGCATTTTCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTCCCACTTGGCACgg                                                                                                                                            <  3:99589/117‑1 (MQ=255)
                                           aCTACGGCGGCGCATTTTCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCAAAGTGGGACGGGGTTATGATCAGCGCAAACCCAGGCACCCAGGTa                                                                                                          >  4:115852/1‑149 (MQ=255)
                                            cTACGGCGGCGCATTTTCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTAc                                                                                                         <  7:174786/149‑1 (MQ=255)
                                                ggcggcGCATTTTCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTAcgtgc                                                                                                     >  4:278122/1‑149 (MQ=255)
                                                      gcATTTTCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCa                                                                                               <  4:14449/149‑1 (MQ=255)
                                                         ttttCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCAcgg                                                                                            >  8:181949/1‑149 (MQ=255)
                                                           ttCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCAcggc                                                                                           <  6:184851/148‑1 (MQ=255)
                                                                   cgcgGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCgtgt                                                                                   <  4:114826/148‑1 (MQ=255)
                                                                   cgcgGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGtgtg                                                                                  <  2:106721/149‑1 (MQ=255)
                                                                   cgcgGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGtgtg                                                                                  <  1:335740/149‑1 (MQ=255)
                                                                       gggCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCgtgt                                                                                   >  3:178571/1‑144 (MQ=255)
                                                                       gggCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCgtgt                                                                                   <  4:178571/144‑1 (MQ=255)
                                                                             aaCTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTcgcg                                                                         >  4:83857/1‑149 (MQ=255)
                                                                                ttCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGAc                                                                      >  8:257264/1‑149 (MQ=255)
                                                                                ttCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGAc                                                                      >  1:32143/1‑149 (MQ=255)
                                                                                  ccATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCAACCAGCTACGTGCCCTGAACGGCGGGCGTGTGGTATTACCGGACTg                                                                    >  8:327931/1‑149 (MQ=255)
                                                                                   cttGGCCATTCAATGGTCGTTTGCTGTCACGTTTCGGTGATGCCCGCGGTAGCGAGGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGGCGTGAACGGCGGGCGTGTTGTATTGGCGGACTg                                                                    <  6:300352/146‑1 (MQ=255)
                                                                                    aTGGCCAGTAAATGGTCGATTGCTGGCACGTTTCCCTGAAGCCCGCGGTAGCGACGCCCCTGCCAAGTGGGACGTGGTTATGATCAGCGACAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGACTGGt                                                                  >  2:351475/1‑149 (MQ=255)
                                                                                     tGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGACTGGtt                                                                 <  8:333101/149‑1 (MQ=255)
                                                                                            tCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGACTGGTTGCGCGGt                                                          <  1:134251/149‑1 (MQ=255)
                                                                                            tCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGACTGGTTGCGCGGt                                                          >  5:333074/1‑149 (MQ=255)
                                                                                            tCAATGCTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGAGGGGTATTCGCGGAGTGGTTGCGCGGt                                                          >  8:337261/1‑149 (MQ=255)
                                                                                              aaTGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGACTGGTTGCGCGGTGc                                                        >  1:241313/1‑149 (MQ=255)
                                                                                              aaTGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGACTGGTTGCGCGGTGc                                                        >  6:77122/1‑149 (MQ=255)
                                                                                                  gTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGACTGGTTGCGCGGTGCCggg                                                    <  6:333074/149‑1 (MQ=255)
                                                                                                   tCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGACTGGTTGCGCGGTGCCGGGc                                                   <  3:278122/149‑1 (MQ=255)
                                                                                                      aTTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGACTGGTTGCGCGGTGCCGGGCTTc                                                >  3:336479/1‑149 (MQ=255)
                                                                                                             gCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGACTGGTTGCGCGGTGCCGGGCTTCTGGTCAt                                         >  3:133759/1‑149 (MQ=255)
                                                                                                                    tCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGAAGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGACTGGTTGCGCGGTGCCGGGCTTCTGGTCATTCTCGa                                   <  3:115852/148‑1 (MQ=255)
                                                                                                                     cGGTGATGCCCGCGGTAGCGTCGCCCGTGCCAAGTGGGACGGGGTTATGATAAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGACTGGTTGCGCGGTGCCGGGCTTCTGGTCATTCTCGAc                                  <  7:327931/148‑1 (MQ=255)
                                                                                                                      ggTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATg                                                                                                                                     <  1:57992/48‑1 (MQ=255)
                                                                                                                      ggTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATg                                                                                                                                     >  2:57992/1‑48 (MQ=255)
                                                                                                                              ccGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCACCCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGACTGGTTGCGCGGTGCCGGGCTTCTGGTCATTCTCGCCCATGGCAACg                        >  8:250867/1‑149 (MQ=255)
                                                                                                                              ccGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGACTGGTTGCGCGGTGCCGGGCTTCTGGTCATTCTCGACCATGGCAACg                        <  2:32143/149‑1 (MQ=255)
                                                                                                                                  ggTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGACTGGTTGCGCGGTGCCGGGCTTCTGGTCATTCTCGACCATGGCAACGGTTa                    <  6:265687/149‑1 (MQ=255)
                                                                                                                                   gTAGCGACGCCGGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCTGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGACTGGTTGTGCGGTGCCGGGCTTCTGGTCATTCTCGACCATGGCAACGGTTAc                   <  1:100061/149‑1 (MQ=255)
                                                                                                                                   gTAGCGACGCCCGTGCCAAGTGGGTCGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGACTGGTTGCGCGGTGCCGGGCTTCTGGTCATTCTCGACCATGGCAACGGTTAc                   <  5:44052/149‑1 (MQ=255)
                                                                                                                                   gTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGACTGGTTGCGCGGTGCCGGGCTTCTGGTCATTCTCGACCATGGCAACGGTTAc                   >  2:365882/1‑149 (MQ=255)
                                                                                                                                      gCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGACTGGTTGCGCGGTGCCGGGCTTCTGGTCATTCTCGACCATGGCAACGGTTACCt                 <  8:2245/148‑1 (MQ=255)
                                                                                                                                         aCGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGACTGGTTGCGCGGTGCCGGGCTTCTGGTCATTCTCGACCATGGCAACGGTTACCTGAGc             <  7:181949/149‑1 (MQ=255)
                                                                                                                                         aCGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGACTGGTTGCGCGGTGCCGGGCTTCTGGTCATTCTCGACCATGGCAACGGTTACCTGAGc             <  4:336479/149‑1 (MQ=255)
                                                                                                                                               gTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGACTGGTTGCGCGGTGCCGGGCTTCTGGTCATTCTCGACCATGGCAACGGTTACCTGAGCCTGTAc       <  1:365882/149‑1 (MQ=255)
                                                                                                                                                tGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGACTGGTTGCGCGGTGCCGGGCTTCTGGTCATTCTCGACCATGGCAACGGTTACCTGAGCCTGTACg      <  3:83857/149‑1 (MQ=255)
                                                                                                                                                 gCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGACTGGTTGCGCGGTGCCGGGCTTCTGGTCATTCTCGACCATGGCAACGGTTACCTGAGCCTGTACgg     >  7:229005/1‑149 (MQ=255)
                                                                                                                                                  ccAAGTGTGACGGGGTTATGTTCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGACTGGTTGCGCGGTGCCGGGCTTCTGGTCATTCTCGACCATGGCAACGGTTACCTGAGCCTGTACGGc    <  7:337261/149‑1 (MQ=255)
                                                                                                                                                   cAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGACTGGTTGCGCGGTGCCGGGCTTCTGGTCATTCTCGACCATGGCAACGGTTACCTGAGCCTGTACGGc    >  7:208650/1‑148 (MQ=255)
                                                                                                                                                    aaGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGTGTGTGGTATTCGCGGACTGGTTGCGCGGTGCCGGGCTTCTGGTCATTCTCGACCATGGCAACGGTTACCTGAGCCTGTACGGCca  >  2:229667/1‑149 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
GCCCGTACCACCCTCGGGCCGATGGTTTCCAGCGATGGCGCCAACTACGGCGGCGCATTTTCTGCTGCGCGGGGCAAACTTCCATGGCCAGTCAATGGTCGATTGCTGGCACGTTTCGGTGATGCCCGCGGTAGCGACGCCCGTGCCAAGTGGGACGGGGTTATGATCAGCGCCAACCCAGGCACCCAGGTACGTGCCGTGCACGGCGGGCGTGTGGTATTCGCGGACTGGTTGCGCGGTGCCGGGCTTCTGGTCATTCTCGACCATGGCAACGGTTACCTGAGCCTGTACGGCCA  >  NC_002947/5763489‑5763784

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: