| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,845,226 | C→A | 9.6% | P46H (CCC→CAC) ‡ | coaD → | phosphopantetheine adenylyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,845,226 | 0 | C | A | 9.6% | 216.7 / 12.5 | 73 | P46H (CCC→CAC) ‡ | coaD | phosphopantetheine adenylyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (31/35); new base A (2/5); total (33/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.46e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.32e-02 | |||||||||||
CGCGATGAACCGAGTGTTGTACCCGGGTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCTGCGTGCGGTGTCCGACTT > NC_002947/5845086‑5845373 | cgccATGAACCGAGTTTTGTACCCGGGTACTTTCGAACCCATTACCAAAGGCCATGGCGATCTTGTCGAGCGCGCTTCGCTGCAATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGaac < 6:142239/149‑1 (MQ=255) gcgATGAACCGAGTGTTGTACCCGGGTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGaac > 1:352798/1‑148 (MQ=255) gATGAACCGAGTGTTGTACCCGGGTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGaacaac > 1:73898/1‑149 (MQ=255) gATGAACCGAGTGTTGTACCCGGGTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGaacaac < 1:274417/149‑1 (MQ=255) aTGAACCGAGTGTTGTACCCGGGTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACg < 6:91854/149‑1 (MQ=255) aaCCGAGTGTTGTACCCGGGTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCTAGAAAAACCCGTTGTTCCAGGG‑GGAACAAAggg < 1:231998/148‑1 (MQ=255) aaCCGAGTGTTGTACCCGGGTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACggg < 8:83256/148‑1 (MQ=255) aaCCGAGTGTTGTACCCGGGTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACggg < 2:138886/148‑1 (MQ=255) aaCCGAGTGTTGTACCCGGGTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCGTTGTTCCAGGG‑GGAACAAAggg < 1:333219/148‑1 (MQ=255) aCCGAGTGTTGTACCCGGTTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGATCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGGCCGAAGAAAAACCCTTTGTTCGCCCT‑GTAACAACGGGtt < 4:201226/149‑1 (MQ=255) ccGAGTGTTGTACCCGGGTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTcccc > 7:228060/1‑133 (MQ=255) ccGAGTGTTGTACCCGGGTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTcccc < 8:228060/133‑1 (MQ=255) ccGAGTGTTGTACCCGGGTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCACGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGaac > 7:257362/1‑140 (MQ=255) ccGAGTGTTGTACCCGGGTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCACGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGaac < 8:257362/140‑1 (MQ=255) tgttgtACCCGGGTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTc > 2:101544/1‑149 (MQ=255) tgttgtACCCGGGTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCGTTGTTCCAGGG‑GGAACAAAGGGtttttctt < 2:20380/149‑7 (MQ=38) gtACCCGGGTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGccc > 1:298127/1‑149 (MQ=255) tACCAGGGTACATTCGACCCCAATAACAAAGGCCATGGCGATCTGGTCGAGCTCGCATCGCTGCTATTCGACAACGAGATCATAGCGGTGGC‑CGACATCCCAAAGAAAATCCCATTCTTACCCCT‑GGAACAACCGGTTGAGCAAGCCCg > 8:276173/1‑149 (MQ=255) cctggTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGa < 4:90873/146‑1 (MQ=255) ccGGGTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGt > 8:177146/1‑147 (MQ=255) ccGGGTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGa < 2:73898/149‑1 (MQ=255) tttCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCAcc > 1:9879/1‑148 (MQ=255) aacccATTACCAAAGGCCATGGCTATCTGGTCGAGCGCGCTTCGCGTCTATTCGACCACGTTATCATCGCTGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCAc < 7:276173/147‑1 (MQ=255) aCCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GTAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCAc < 1:195680/149‑1 (MQ=255) cccATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCt > 5:325663/1‑149 (MQ=255) ccAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGaac < 6:310728/105‑1 (MQ=255) ccAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGaac > 5:310728/1‑105 (MQ=255) cAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGtt > 4:87480/1‑112 (MQ=255) cAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGtt < 3:87480/112‑1 (MQ=255) cAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATg > 2:180918/1‑149 (MQ=255) cAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATg > 2:267408/1‑149 (MQ=255) cAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATg > 3:77342/1‑149 (MQ=255) cAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCGTTGTTCCAGGG‑GGAACAAAGGGtttttc < 1:110149/116‑5 (MQ=37) cAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCGTTGTTCCAGGG‑GGAACAAAGGGtttttc > 2:110149/1‑112 (MQ=37) cAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCGTTGTTCCAGGG‑GGAACAAAGGGtt < 4:310625/112‑1 (MQ=38) cAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCGTTGTTCCAGGG‑GGAACAAAGGGtt > 3:310625/1‑112 (MQ=38) aaGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTc > 6:344055/1‑149 (MQ=255) aGGCCATGGCGATCTGGTCGAGCGCGCTTAGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCg < 4:251449/149‑1 (MQ=255) gCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCg > 1:282586/1‑147 (MQ=255) gCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCg > 2:35365/1‑147 (MQ=255) gCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGaa < 2:282586/149‑1 (MQ=255) gCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGaa < 4:77342/149‑1 (MQ=255) ccATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAg < 7:176897/149‑1 (MQ=255) gCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGATCAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATc < 1:101544/149‑1 (MQ=255) gCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATc < 7:177146/149‑1 (MQ=255) gTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATc < 6:19839/141‑1 (MQ=255) gTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATc > 5:19839/1‑141 (MQ=255) gTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTtctc > 1:269258/1‑149 (MQ=255) gAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAAAGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTc > 7:179806/1‑149 (MQ=255) aGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTcc > 2:116688/1‑149 (MQ=255) gcgcgcTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTccc < 2:298127/149‑1 (MQ=255) gcTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGtt > 2:116958/1‑149 (MQ=255) cgcgGCTATTCGAAGACGTGATGATCGTGGTGGC‑GGCCAGCCCCAAGAAAAAGCCTTTGTTCGCCCT‑GGAACTACGGGTTGAGCTCGCCCGTGAGGTCACCAATCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGgc < 3:254064/148‑1 (MQ=255) gcgGCTATTCGACCACGTGATCATCGCGGTGGCGGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGgcg > 1:54686/1‑149 (MQ=255) cgGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCa < 1:180918/149‑1 (MQ=255) gCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTATGAAAAAC‑GGTTTAGCTCGCCCCTGAGGTCACCAAGCACCAGCCCAATTTAGAAGTCAAAGGCGTATATTACCAGTTTGCGCaat > 1:110460/1‑147 (MQ=255) gACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTcc < 2:207021/129‑1 (MQ=255) gACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTGGCCaa < 2:9879/149‑1 (MQ=255) aCCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAg < 2:352798/149‑1 (MQ=255) gTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGaa > 5:117847/1‑147 (MQ=255) atcatcGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAgg < 2:269258/148‑1 (MQ=255) c‑ggcCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTc < 5:344055/149‑1 (MQ=255) gcCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCt < 2:110460/149‑1 (MQ=255) ccAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGt < 5:316682/146‑1 (MQ=255) ccAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCAGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCACTGTTGGCGCATTTCGCCAAGGAACAGGGCCCCAACCTCTTCCTGCGt > 6:316682/1‑146 (MQ=255) aGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTcc < 3:287993/95‑1 (MQ=255) aGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTcc > 4:287993/1‑95 (MQ=255) gAAAAACCCTTTGTTCCCCCT‑GGAACAAGGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCtgc < 8:179806/149‑1 (MQ=255) aCCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCtgcgtgcg > 2:29945/1‑149 (MQ=255) ccTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCTGCGTGCGgt < 6:325663/149‑1 (MQ=255) tttGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCTGCGTGCGgtgt > 7:302616/1‑149 (MQ=255) gTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCTGCGTGCGGTGTcc > 5:329663/1‑148 (MQ=255) gTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCTGCGTGCGGTGTcc < 1:35365/148‑1 (MQ=255) ttCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCTGCGTGCGGTGTcc < 4:254373/147‑1 (MQ=255) ttCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCTGCGTGCGGTGTcc > 3:254373/1‑147 (MQ=255) cccccT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCTGCGTGCGGTGTCCGAc < 1:116958/148‑1 (MQ=255) ccccT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCTGCGTGCGgt > 4:128416/1‑140 (MQ=255) ccccT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCTGCGTGCGgt < 3:128416/140‑1 (MQ=255) ccccT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCTGCGTGCGGTGTCCGACtt > 3:156762/1‑149 (MQ=255) cccT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCTGCGTGCGGTGTc > 5:295923/1‑142 (MQ=255) cccT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCTGCGTGCGGTGTc < 6:295923/142‑1 (MQ=255) | CGCGATGAACCGAGTGTTGTACCCGGGTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGC‑GGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCT‑GGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCTGCGTGCGGTGTCCGACTT > NC_002947/5845086‑5845373 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |