| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,947,762 | G→A | 9.8% | R238C (CGC→TGC) | rho ← | transcription termination factor Rho |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,947,762 | 0 | G | A | 9.8% | 194.1 / 9.0 | 71 | R238C (CGC→TGC) | rho | transcription termination factor Rho |
| Reads supporting (aligned to +/- strand): ref base G (31/33); new base A (3/4); total (34/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.34e-01 | |||||||||||
CGGTCAGCACCTTGCCGGAGCTCGGGATCACGGTGTTGTAGGCACGCGCCAGTCGAGTGATCGAGTCCAGCAGGATAACCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCTCGTCGATCAGCAGGACGATCAGGTGGCACTCAGGGTTGTTACGGGTGATGTTGGCCGCAATGTTCTG > NC_002947/5947615‑5947909 | cGGTCAGCACCTTGCCGGAGCTCGGGATCACGGTGTTGTAGGCACGCGCCAGTCGAGTGATCGAGTCCAGCAGGATAACCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCgg < 3:215445/149‑1 (MQ=255)cGGTCAGCACCTTGCCGGAGCTCGGGATCACGGTGTTGTAGGCACGCGCCAGTCGAGTGATCGAGTCCAGCAGGATAACCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCgg > 6:232297/1‑149 (MQ=255) tCAGCACCTTGCCGGAGCTCGGGATCACGGTGTTGTAGGCACGCGCCAGTCGAGTGATCGAGTCCAGCAGGATAACCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGtt < 7:144247/149‑1 (MQ=255) gCACCTTGCCGGAGCTCGGGATCACGGTGTTGTAGGCACGCGCCAGTCGAGTGATCGAGTCCAGCAGGATAACCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTggc < 4:36005/149‑1 (MQ=255) gCACCTTGCCGGAGCTCGGGATCACGGTGTTGTAGGCACGCGCCAGTCGAGTGATCGAGTCCAGCAGGATAACCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCAGGTTggc < 4:349669/149‑1 (MQ=255) ccTTGCCGGAGCTCGGGATCACGGTGTTGTAGGCACGCGCCAGTCGAGTGATCGAGTCCAGCAGGATAACCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCAGGTTggcggc < 3:96361/149‑1 (MQ=255) gCCGGAGCTCGGGATCACGGTGTTGTAGGCACGCGCCAGTCGAGTGATCGAGTCCAGCAGGATAACCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCAGGTTGGCGGCtc < 4:303195/147‑1 (MQ=255) ccGGAGCTCGGGATCACGGTGTTGTAGGCACGCGCCAGTCGAGTGATCGAGTCCAGCAGGATAACCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCtcgtc < 3:30293/149‑1 (MQ=255) cGGAGCTCGGGATCACGGTGTTGTAGGCACGCGCCAGTCGAGTGATCGAGTCCAGCAGGATAACCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCtcgtc > 8:227036/1‑148 (MQ=255) aGCTCGGGATCACGGTGTTGTAGGCACGCGCCAGTCGAGTGATCGAGTCCAGCAGGATAACCACATCTTTCTTGTGCTCGACCAGGCGCTTGGCCCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGaa < 1:102083/149‑1 (MQ=255) tCGGGATCACGGTGTTGTAGGCACGCGCCAGTCGAGTGATCGAGTCCAGCAGGATAACCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCAGGTTGGCGGCTCGTCGAAGGTg > 6:175483/1‑149 (MQ=255) gggATCACGGTGTTGTAGGCACGCGCCAGTCGAGTGATCGAGTCCAGCAGGATAACCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTgg > 8:69733/1‑148 (MQ=255) gggATCACGGTGTTGTAGGCACGCGCCAGTCGAGTGATCGAGTCCAGCAGGATAACCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGa < 2:368542/149‑1 (MQ=255) ggATCACGGTGTTGTAGGCACGCGCCAGTCGAGTGATCGAGTCCAGCAGGATAACCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGaa < 2:50153/149‑1 (MQ=255) ttgtAGGCACGCGCCAGTCGAGTGATCGAGTCCAGCAGGATAACCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTc < 2:186719/149‑1 (MQ=255) tAGGCACGCGCCAGTCGAGTGATCGAGTCCAGCAGGATAACCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGcc > 8:288809/1‑149 (MQ=255) ggCACGCGCCAGTCGAGTGATCGAGTCCAGCAGGATAACCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCcac > 1:146182/1‑149 (MQ=255) ggCACGCGCCAGTCGAGTGATCGAGTCCAGCAGGATAACCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCAGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCca < 5:175483/148‑1 (MQ=255) cACGCGCCAGTCGAGTGATCGAGTCCAGCAGGATAACCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCcacg > 7:95636/1‑148 (MQ=255) ccAGTCGAGTGATCGAGTCCAGCAGGATAACCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTg < 5:232297/149‑1 (MQ=255) gTCGAGTGATCGAGTCCAGCAGGATAACCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTgcgc < 7:69733/149‑1 (MQ=255) gAGTGATCGAGTCCAGCAGGATAACCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTAGATCACAATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACAACTTCGCCACGCACGGTGCGCTg > 5:297908/1‑148 (MQ=255) aTCGAGTCCAGCAGGATAACCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTc > 7:153869/1‑149 (MQ=255) aGTCCAGCAGGATAACCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGaa > 8:72261/1‑103 (MQ=255) agcagGATAACCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCActtc > 8:230634/1‑149 (MQ=255) agcagGATAACCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCActtc > 1:368311/1‑149 (MQ=255) aaCCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGgc > 7:298246/1‑149 (MQ=255) aaCCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCATCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGAAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGgc > 7:28809/1‑149 (MQ=255) aCCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCg < 5:312774/132‑1 (MQ=255) aCCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCg > 6:312774/1‑132 (MQ=255) ccACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGgcgc > 2:342200/1‑149 (MQ=255) acaTCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCtc > 6:22398/1‑149 (MQ=255) aTCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAg > 6:158984/1‑92 (MQ=255) aTCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAg < 5:158984/92‑1 (MQ=255) aTCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCtcgt < 2:368311/149‑1 (MQ=255) ctttcttGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCtcgtc > 4:368203/1‑148 (MQ=255) ctttcttGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCtcgtc > 6:62115/1‑148 (MQ=255) tcttGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCTCGTCGAt < 5:326559/148‑1 (MQ=255) tcttGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCTCGTCGAt > 3:19478/1‑148 (MQ=255) cttGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCTCGTCGATc < 5:62115/148‑1 (MQ=255) cttGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCCCCACGCACCGTGCGCTGCATTACGGTCACTACT‑‑TCCGGGCGCTCGTCGATca > 4:14155/1‑149 (MQ=255) cTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCTCGTCGATCAGCAGGa < 3:27516/149‑1 (MQ=255) cTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCTCGTCGATCAGCAGGa > 2:101303/1‑149 (MQ=255) tCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGgcgc > 8:46366/1‑132 (MQ=255) tCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGgcgc < 7:46366/132‑1 (MQ=255) gACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCgg > 8:350632/1‑126 (MQ=255) gACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCgg < 7:350632/126‑1 (MQ=255) cAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCCCGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCTCGTCGATCAGCAGGACGAt > 6:352384/1‑147 (MQ=255) aGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCTCGTCGATCAGCAGGACGATCAg < 2:55437/149‑1 (MQ=255) gcgcTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCTCGTCGATCAGCAGGACGATCAGGt < 7:288809/149‑1 (MQ=255) gcTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCTCGTCGATCAGCAGGACGATCAGGTgg < 7:227036/149‑1 (MQ=255) ccTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCTCGTCGATCAGCAGGACGATCAGGTGGCACTCa < 5:22398/149‑1 (MQ=255) ctcGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCAttt > 1:181167/1‑92 (MQ=255) ctcGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCAttt < 2:181167/92‑1 (MQ=255) ctcGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCtc > 8:294349/1‑114 (MQ=255) ctcGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCtc < 7:294349/114‑1 (MQ=255) tcGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCTCGTCGATCAGCAGGACGATCAg > 2:295391/1‑134 (MQ=255) tcGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCTCGTCGATCAGCAGGACGATCAg < 1:295391/134‑1 (MQ=255) tCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCTCGTCGATCAGCAGGACGATCAGGTGGCACTCAGGGTTGTTa < 8:95636/149‑1 (MQ=255) ccATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCTCGTCGATCAGCAGGa > 2:69998/1‑120 (MQ=255) ccATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCTCGTCGATCAGCAGGa < 1:69998/120‑1 (MQ=255) ccATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCTCGTCGATCAGCAGGACGATCAGGTGGCACTCAGGGTTGTTACgg > 1:279019/1‑149 (MQ=255) tctcGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCTCGTCGATCAGCAGGACGATCAGGTGGCACTCAGGGTTGTTACGGGTg > 7:1006/1‑149 (MQ=255) tctcGGCAACCTG‑CACGTGGCAGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCTCGTCGATCAGCAGGACGATCAGGTGGCACTCAGGGTTGTTACGGGt > 1:339824/1‑148 (MQ=255) tcGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCTCGTCGATCAGCAGGACGATCAGGTGGCACTCAGGGTTGTTACGGGTGAt > 5:72881/1‑149 (MQ=255) ggCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCTCCTCCGGGCGCTCGTCGATCAGCAGGACGATCAGGTGGCACTCAGGGTTGTTACGGGTg < 1:101303/147‑1 (MQ=255) ggCAACCTG‑CACGTGGCGGGGTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCGCGTCGATCAGCAGGACGATCAGGTGGCACTCAGGGTTGTTACggg < 3:14155/143‑1 (MQ=255) gccAACCTGCCACGT‑GCAGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCTCGTCGATCAGCAGGACGATCAGGTGGCACTCAGGGTTGTTACGGGTGATGt > 8:181349/3‑149 (MQ=255) cAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCTCGTCGATCAGCAGGACGATCAGGTGGCACTCAGGGTTGTTACGGGTGATGTTg < 4:19478/149‑1 (MQ=255) aaCCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCTCGTCGATCAGCAGGACGATCAGGTGGCACTCAGGGTTGTTACGGGTGATGTTgg < 3:368203/149‑1 (MQ=255) cTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCTCGTCGATCAGCAGGACGATCAGGTGGCACTCAGGGTTGTTACGGGTGATGTTGGCCg < 1:342200/149‑1 (MQ=255) tGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCTCGTCGATCAGCAGGACGATCAGGTGGCACTCAGGGTTGTTACGGGTGATGTTGGCCGCAATGtt < 7:230634/149‑1 (MQ=255) tGGCGGGGTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCTCGTCGATCAGCAGGACGATCAGGTGGCACTCAGGGTTGTTACGGGTGATGTTGGCCGCAATGtt < 8:153869/149‑1 (MQ=255) gggTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCTCGTCGATCAGCAGGACGGTCAGGTGGCACTCAGGGTTGTTACGGGTGATGTTGGCCGCAATGTTCTg > 7:68677/1‑148 (MQ=255) | CGGTCAGCACCTTGCCGGAGCTCGGGATCACGGTGTTGTAGGCACGCGCCAGTCGAGTGATCGAGTCCAGCAGGATAACCACATCTTTCTTGTGCTCGACCAGGCGCTTGG‑CCTTCTCGATCACCATCTCGGCAACCTG‑CACGTGGCGGGTTGGCGGCTCGTCGAAGGTGGAAGCAACCACTTCGCCACGCACGGTGCGCTGCATTTCGGTCACTTCT‑‑TCCGGGCGCTCGTCGATCAGCAGGACGATCAGGTGGCACTCAGGGTTGTTACGGGTGATGTTGGCCGCAATGTTCTG > NC_002947/5947615‑5947909 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |