| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,060,463 | G→A | 6.7% | intergenic (+99/+82) | PP_5311 → / ← PP_5312 | signal transduction protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,060,463 | 0 | G | A | 6.7% | 229.5 / 3.9 | 80 | intergenic (+99/+82) | PP_5311/PP_5312 | signal transduction protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (39/33); new base A (2/3); total (41/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.60e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.24e-01 | |||||||||||
CGAGAACCTGTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGG > NC_002947/6060316‑6060608 | cGAGAACCTGTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCg > 3:187062/1‑148 (MQ=255) cTGTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGt > 7:286116/1‑149 (MQ=255) gTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGc > 3:4990/1‑149 (MQ=255) ttGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTAGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCTTCGCCGGTgt < 1:267875/148‑2 (MQ=255) ttGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTAGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCTTCGCCGGTgt < 1:267878/148‑2 (MQ=255) ttGAGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGttc < 8:286116/148‑3 (MQ=255) gTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCTTCGCCGGTgttcgcg < 4:233573/149‑7 (MQ=38) gTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGc < 1:84542/149‑1 (MQ=255) gCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCAcc < 4:4990/148‑1 (MQ=255) cTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACcgc < 8:84903/149‑1 (MQ=255) tGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACcgc‑g > 1:321170/1‑149 (MQ=255) ttCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGc > 7:193791/1‑149 (MQ=255) ttCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGc > 8:60797/1‑149 (MQ=255) cAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGt < 4:187062/149‑1 (MQ=255) aGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGtt < 5:372814/149‑1 (MQ=255) cATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTcgcg > 1:18078/1‑149 (MQ=255) aTGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCTAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGt > 1:179070/1‑142 (MQ=255) aTGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCgg < 8:117877/149‑1 (MQ=255) aTGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCgg > 3:47296/1‑149 (MQ=255) tGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCggg < 6:173581/149‑1 (MQ=255) gCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTTCCCGCGAACACCGGCGAAGCCCGTGCCAAGCACCGC‑GGCGCTTGTTTAGCGGGc > 6:54713/1‑149 (MQ=37) gCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCggg > 7:38062/1‑148 (MQ=255) agcattaagcattaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGTACTGTGGGAGCGGGCTTGCACGCTAAAAACGGCGAAGCCGGTGCCATTAACCGC‑GTCGCTTGTTTCGAGGGCACGc > 2:139538/2‑149 (MQ=37) gattaagcattaacACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCcc > 8:193791‑M2/2‑147 (MQ=255) ttaagcattaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCccgc < 4:265164‑M2/149‑5 (MQ=255) agcattaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCccgctc > 8:256259‑M2/1‑142 (MQ=255) attaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGt > 4:165068/1‑126 (MQ=255) attaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGt < 3:165068/126‑1 (MQ=255) taaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCccgctcccacag > 1:295359‑M2/1‑137 (MQ=255) taaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGACCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCccgctcccccag < 2:252828‑M2/149‑13 (MQ=255) acaTAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCAGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTa < 1:252828/149‑1 (MQ=255) aTAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCAc > 6:324157/1‑129 (MQ=255) aTAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCAc < 5:324157/129‑1 (MQ=255) aTAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTaaa < 5:191709/148‑1 (MQ=255) aTAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTa > 6:191709/1‑146 (MQ=255) aaCTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGt > 2:132934/1‑149 (MQ=255) tCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGt < 1:279606/132‑1 (MQ=255) tCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGt > 2:279606/1‑132 (MQ=255) tCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGc > 4:269803/1‑149 (MQ=255) cTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCa < 2:4403/148‑1 (MQ=255) cTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCa < 4:34563/148‑1 (MQ=255) aaTTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGNTGCCATGCACCGC‑GTCGCTTGTTTAGCGGGCACGCCCGCTCCCAAAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCt > 1:339094/1‑149 (MQ=255) aaTTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCt > 1:333748/1‑149 (MQ=255) aaTTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCACCGTCGGGCTTCAGCCt > 6:326174/1‑149 (MQ=255) tttCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCttt > 5:142087/1‑149 (MQ=255) tAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTttcttc > 3:47422/1‑149 (MQ=255) aaCAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTtcttct > 1:290063/1‑149 (MQ=255) aCAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTcttctt > 6:152832/1‑149 (MQ=255) cAGCTGGCGCGTTTTTGGAGTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCAGCGC‑GTCGCTTGTTTCGCGGGCACGCGCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTcttctt < 5:162771/148‑1 (MQ=255) cAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCa > 8:255338/1‑91 (MQ=255) cAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCa < 7:255338/91‑1 (MQ=255) cAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCttt < 5:326174/149‑1 (MQ=255) cAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCttt < 4:47296/149‑1 (MQ=255) cAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCttt < 8:38062/149‑1 (MQ=255) ggCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGtt > 2:310475/1‑148 (MQ=255) cgcgATTTTGNTCTGTGNGAGCGGGCTTGCCCGCTNACNCCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCa < 2:339094/149‑1 (MQ=255) cgcgATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCa < 2:333748/149‑1 (MQ=255) gcgATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAg < 3:265164/149‑1 (MQ=255) cgATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAgg > 3:26279/1‑149 (MQ=255) tGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTAttt < 4:47422/148‑1 (MQ=255) gACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTtcat < 7:60797/149‑1 (MQ=255) tggtatcGGTCTTGCCCGCTAACACCGGCGAAGCCGGTGCCATGCACCGC‑TTCGCTTGTTTCTCGTGCACGCCCTCTCCCACATGTAAAGCGTCATCATCCCCGTCTGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAAc < 1:139538/142‑1 (MQ=37) tgGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAAc < 3:269803/148‑1 (MQ=255) gAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCt > 6:144046/1‑149 (MQ=255) gCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAg > 5:24653/1‑126 (MQ=255) gCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAg < 6:24653/126‑1 (MQ=255) gCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAAc > 5:216795/1‑148 (MQ=255) ttGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACca > 2:134800/1‑148 (MQ=255) ccGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTc > 7:103652/1‑91 (MQ=255) ccGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTc < 8:103652/91‑1 (MQ=255) ccGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCa > 3:134733/1‑149 (MQ=255) ccGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCAGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCa > 1:95219/1‑149 (MQ=255) ccGCGAACACCGGCAAAGCCGGTGCCATGCACCGC‑GGCGCCTGTTTCGCGGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactccctta < 1:185477‑M2/149‑93 (MQ=255) ccGCGAACACCGGCAAAGCCGGTGCCATGCACCGC‑GGCGCCTGTTTCGCGGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcat > 3:122633‑M2/1‑57 (MQ=255) ccGCGAACACCGGCAAAGCCGGTGCCATGCACCGC‑GGCGCCTGTTTCGCGGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcat < 4:122633‑M2/139‑83 (MQ=255) cgcgAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCAc > 1:100670/1‑149 (MQ=255) gcgAACACCGGCAAAGCCGGTGCCATGCACCGC‑GGCGCCTGTTTCGCGGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatga < 1:83163‑M2/139‑85 (MQ=255) gcgAACACCGGCAAAGCCGGTGCCATGCACCGC‑GGCGCCTGTTTCGCGGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatga > 2:83163‑M2/1‑55 (MQ=255) cGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCgg > 3:58282/1‑149 (MQ=255) ggCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCggg < 5:144046/149‑1 (MQ=255) ggCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCAGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCggg < 2:95219/149‑1 (MQ=255) | CGAGAACCTGTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGG > NC_002947/6060316‑6060608 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |