| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,060,489 | T→C | 5.9% | intergenic (+125/+56) | PP_5311 → / ← PP_5312 | signal transduction protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,060,489 | 0 | T | C | 5.9% | 250.7 / 4.2 | 84 | intergenic (+125/+56) | PP_5311/PP_5312 | signal transduction protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (38/41); new base C (2/3); total (40/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.85e-01 | |||||||||||
CAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCT > NC_002947/6060344‑6060636 | cAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGt < 4:187062/149‑1 (MQ=255) aGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGtt < 5:372814/149‑1 (MQ=255) cATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTcgcg > 1:18078/1‑149 (MQ=255) aTGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCTAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGt > 1:179070/1‑142 (MQ=255) aTGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCgg > 3:47296/1‑149 (MQ=255) aTGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCgg < 8:117877/149‑1 (MQ=255) tGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCggg < 6:173581/149‑1 (MQ=255) gCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTTCCCGCGAACACCGGCGAAGCCCGTGCCAAGCACCGC‑GGCGCTTGTTTAGCGGGc > 6:54713/1‑149 (MQ=37) gCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCggg > 7:38062/1‑148 (MQ=255) agcattaagcattaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGTACTGTGGGAGCGGGCTTGCACGCTAAAAACGGCGAAGCCGGTGCCATTAACCGC‑GTCGCTTGTTTCGAGGGCACGc > 2:139538/2‑149 (MQ=37) gattaagcattaacACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCcc > 8:193791‑M2/2‑147 (MQ=255) ttaagcattaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCccgc < 4:265164‑M2/149‑5 (MQ=255) agcattaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCccgctc > 8:256259‑M2/1‑142 (MQ=255) attaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGt > 4:165068/1‑126 (MQ=255) attaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGt < 3:165068/126‑1 (MQ=255) taaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCccgctcccacag > 1:295359‑M2/1‑137 (MQ=255) taaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGACCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCccgctcccccag < 2:252828‑M2/149‑13 (MQ=255) acaTAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCAGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTa < 1:252828/149‑1 (MQ=255) aTAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCAc < 5:324157/129‑1 (MQ=255) aTAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCAc > 6:324157/1‑129 (MQ=255) aTAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTaaa < 5:191709/148‑1 (MQ=255) aTAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTa > 6:191709/1‑146 (MQ=255) aaCTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGt > 2:132934/1‑149 (MQ=255) tCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGt > 2:279606/1‑132 (MQ=255) tCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGt < 1:279606/132‑1 (MQ=255) tCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGc > 4:269803/1‑149 (MQ=255) cTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCa < 2:4403/148‑1 (MQ=255) cTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCa < 4:34563/148‑1 (MQ=255) aaTTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGNTGCCATGCACCGC‑GTCGCTTGTTTAGCGGGCACGCCCGCTCCCAAAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCt > 1:339094/1‑149 (MQ=255) aaTTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCt > 1:333748/1‑149 (MQ=255) aaTTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCACCGTCGGGCTTCAGCCt > 6:326174/1‑149 (MQ=255) tttCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCttt > 5:142087/1‑149 (MQ=255) tAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTttcttc > 3:47422/1‑149 (MQ=255) aaCAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTtcttct > 1:290063/1‑149 (MQ=255) aCAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTcttctt > 6:152832/1‑149 (MQ=255) cAGCTGGCGCGTTTTTGGAGTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCAGCGC‑GTCGCTTGTTTCGCGGGCACGCGCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTcttctt < 5:162771/148‑1 (MQ=255) cAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCa < 7:255338/91‑1 (MQ=255) cAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCa > 8:255338/1‑91 (MQ=255) cAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCttt < 4:47296/149‑1 (MQ=255) cAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCttt < 5:326174/149‑1 (MQ=255) cAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCttt < 8:38062/149‑1 (MQ=255) ggCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑tt > 2:310475/1‑148 (MQ=255) cgcgATTTTGNTCTGTGNGAGCGGGCTTGCCCGCTNACNCCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCa < 2:339094/149‑1 (MQ=255) cgcgATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCa < 2:333748/149‑1 (MQ=255) gcgATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAg < 3:265164/149‑1 (MQ=255) cgATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAgg > 3:26279/1‑149 (MQ=255) tGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTAttt < 4:47422/148‑1 (MQ=255) gACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTtcat < 7:60797/149‑1 (MQ=255) tggtatcGGTCTTGCCCGCTAACACCGGCGAAGCCGGTGCCATGCACCGC‑TTCGCTTGTTTCTCGTGCACGCCCTCTCCCACATGTAAAGCGTCATCATCCCCGTCTGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAAc < 1:139538/142‑1 (MQ=37) tgGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAAc < 3:269803/148‑1 (MQ=255) gAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAACCCCt > 6:144046/1‑149 (MQ=255) gCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAg < 6:24653/126‑1 (MQ=255) gCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAg > 5:24653/1‑126 (MQ=255) gCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAACCCCTGGAAc > 5:216795/1‑148 (MQ=255) ttGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAACCCCTGGAACca > 2:134800/1‑148 (MQ=255) ccGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTc < 8:103652/91‑1 (MQ=255) ccGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTc > 7:103652/1‑91 (MQ=255) ccGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAACCCCTGGAACCACATCa > 3:134733/1‑149 (MQ=255) ccGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCAGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAACCCCTGGAACCACATCa > 1:95219/1‑149 (MQ=255) ccGCGAACACCGGCAAAGCCGGTGCCATGCACCGC‑GGCGCCTGTTTCGCGGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactccctta < 1:185477‑M2/149‑93 (MQ=255) ccGCGAACACCGGCAAAGCCGGTGCCATGCACCGC‑GGCGCCTGTTTCGCGGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcat > 3:122633‑M2/1‑57 (MQ=255) ccGCGAACACCGGCAAAGCCGGTGCCATGCACCGC‑GGCGCCTGTTTCGCGGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcat < 4:122633‑M2/139‑83 (MQ=255) cgcgAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAACCCCTGGAACCACATCAc > 1:100670/1‑149 (MQ=255) gcgAACACCGGCAAAGCCGGTGCCATGCACCGC‑GGCGCCTGTTTCGCGGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatga > 2:83163‑M2/1‑55 (MQ=255) gcgAACACCGGCAAAGCCGGTGCCATGCACCGC‑GGCGCCTGTTTCGCGGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatga < 1:83163‑M2/139‑85 (MQ=255) cGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCgg > 3:58282/1‑149 (MQ=255) ggCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCggg < 5:144046/149‑1 (MQ=255) ggCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCAGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCggg < 2:95219/149‑1 (MQ=255) aGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGcc < 2:18078/149‑1 (MQ=255) gCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGccc < 2:100670/149‑1 (MQ=255) gCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGccc < 4:26279/149‑1 (MQ=255) cGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCtt > 5:242121/1‑149 (MQ=255) gTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGa < 2:290063/149‑1 (MQ=255) gTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGa < 5:152832/149‑1 (MQ=255) ccATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCt < 5:54713/149‑1 (MQ=255) aTGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAACCCCTGGAAc < 6:148902/116‑1 (MQ=255) aTGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAACCCCTGGAAc > 5:148902/1‑116 (MQ=255) aCCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGCCTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGAtg < 1:296290/149‑1 (MQ=255) aCCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCtt < 4:71539/138‑1 (MQ=255) aCCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCtt > 3:71539/1‑138 (MQ=255) cgc‑gTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGc < 1:132934/149‑1 (MQ=255) cTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCt < 6:216795/149‑1 (MQ=255) cTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCt < 5:116686/149‑1 (MQ=255) cTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATAATCCCCGTCGGGCTTCAGACTTTCTTCTTTGG‑TTTAAGGTTTTTCTTGAGACCCTGGACCCACATCACCAGCGCCGGGTTGCCCGTGATCTGGATGTGCTTGtagt > 5:263954/1‑146 (MQ=255) ttGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTcc < 7:266761/147‑1 (MQ=255) ttGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTcc > 8:266761/1‑147 (MQ=255) | CAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGC‑GTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGG‑TTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCT > NC_002947/6060344‑6060636 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |