| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 558,477 | A→C | 5.1% | E21D (GAA→GAC) | rplR → | 50S ribosomal protein L18 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 558,477 | 0 | A | C | 5.1% | 242.4 / 2.7 | 78 | E21D (GAA→GAC) | rplR | 50S ribosomal protein L18 |
| Reads supporting (aligned to +/- strand): ref base A (38/36); new base C (2/2); total (40/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.19e-01 | |||||||||||
CCAGAGCCTTACAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGCAACATCGACGCGGCCA > NC_002947/558330‑558625 | ccAGAGCCTTACAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAAc > 8:324973/1‑149 (MQ=255) agagCCTTACAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTc > 2:29793/1‑149 (MQ=255) ccTTACAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGTCCGTGGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAg > 1:264462/1‑149 (MQ=255) ttACAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTc > 6:121894/1‑149 (MQ=255) aCAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGaa < 8:182397/144‑1 (MQ=255) aCAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACAGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGaa > 7:182397/1‑144 (MQ=255) cAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATCTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCg < 1:96172/148‑1 (MQ=255) cAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGACTTCGAGTTCGTg < 1:23699/149‑1 (MQ=255) aaaggtaaaggtGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTgc < 6:158576/149‑1 (MQ=255) aaaggtaaaggtGTGCGTTACGAGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTgc < 7:108590/149‑1 (MQ=255) gtaaaggtGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGACTTCGAGTTCGTgcat < 8:240212/147‑3 (MQ=255) gtaaaggtGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGACTTCGAGTTCGTgcat > 7:240212/1‑145 (MQ=255) aaggtGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCACAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCtg‑t < 2:137015/148‑1 (MQ=255) aggtGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGc < 1:29793/149‑1 (MQ=255) aggtGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGc < 5:155399/149‑1 (MQ=255) gtgtGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGc > 4:183039/1‑147 (MQ=255) gtgtGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGc < 3:183039/147‑1 (MQ=255) gtgtGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCgt > 6:157883/1‑149 (MQ=255) gtgtGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCgt > 1:175572/1‑149 (MQ=255) cGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTc < 7:324973/148‑1 (MQ=255) cgcgGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGctc < 7:290834/148‑1 (MQ=255) cgcgGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGctc < 7:285607/148‑1 (MQ=255) gACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCgc < 4:5844/149‑1 (MQ=255) aaGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCgcagca > 7:127339/1‑149 (MQ=255) cgtcgtAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTAc < 5:121894/148‑1 (MQ=255) gtcgtAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGc > 1:245503/1‑149 (MQ=255) tcgtAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGcc > 6:321516/1‑149 (MQ=255) tcgtAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCCACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGcc < 5:321516/149‑1 (MQ=255) gtAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGcc > 7:224939/1‑147 (MQ=255) aagaagCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCg > 1:188930/1‑129 (MQ=255) aagaagCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCg < 2:188930/129‑1 (MQ=255) aagaagCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGt > 2:246578/1‑149 (MQ=255) cAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCg < 3:100306/149‑1 (MQ=255) cAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCg > 7:156513/1‑149 (MQ=255) gaagTAGTGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGAc > 7:297745/1‑149 (MQ=255) gaagTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGAc < 2:264462/149‑1 (MQ=255) agTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACgg < 8:156513/149‑1 (MQ=255) gTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACgg > 8:101253/1‑148 (MQ=255) tAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGccc > 2:49717/1‑128 (MQ=255) tAGGGCCTAGTAAATGAACGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGGCTGCTGCGTGTTCCGCTCCTCGCAGCACATCTACGccc < 1:49717/129‑1 (MQ=255) ccTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAg > 7:153209/1‑149 (MQ=255) ccTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAg < 1:246578/149‑1 (MQ=255) gTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTc > 8:142213/1‑149 (MQ=255) gTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTc > 7:324517/1‑149 (MQ=255) gTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTc > 7:223472/1‑149 (MQ=255) aaTGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTg < 5:157883/148‑1 (MQ=255) gACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGc > 8:262281/1‑147 (MQ=255) gACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAgcgc > 5:237968/1‑149 (MQ=255) cAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCt < 8:297745/149‑1 (MQ=255) cAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCt < 7:262281/149‑1 (MQ=255) aaaaGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGa > 5:235880/1‑149 (MQ=255) aaaGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGAc > 1:276202/1‑149 (MQ=255) aaaGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGAc > 7:75987/1‑149 (MQ=255) aaGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGAcc < 6:237968/149‑1 (MQ=255) aGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCt > 4:6712/1‑149 (MQ=255) gTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCtt > 1:183961/1‑149 (MQ=255) gTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCtt < 8:153209/149‑1 (MQ=255) t‑tCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGa < 1:15763/148‑1 (MQ=255) tCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGAc > 8:142892/1‑148 (MQ=255) tCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGAc > 6:67286/1‑148 (MQ=255) gACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGCCCTTGGACa > 4:33563/1‑147 (MQ=255) tGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTg < 7:133044/122‑1 (MQ=255) tGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTg > 8:133044/1‑122 (MQ=255) tGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGAc > 3:358832/1‑149 (MQ=255) tCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGc < 8:75987/149‑1 (MQ=255) cgcTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTg < 8:324517/149‑1 (MQ=255) gcTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGc > 7:172193/1‑116 (MQ=255) gcTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGc < 8:172193/116‑1 (MQ=255) aaaGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGgcgc < 2:245503/149‑1 (MQ=255) gTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGc < 5:67286/149‑1 (MQ=255) gTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGc < 2:276202/149‑1 (MQ=255) gTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGc < 7:142892/149‑1 (MQ=255) ctcAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGCaa > 2:134928/1‑149 (MQ=255) tcAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATATACGCCCAGGTCATTTCGGCCGACGGCAGCAACGTTCTGGCAAGCGCCTCGCCCTTGGACAAAGACATGCGTCATGGCGCCACTGGCaa > 8:154454/1‑148 (MQ=255) aaGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGCaa < 6:235880/146‑1 (MQ=255) gcgCACGACTTCGAGTTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGCAACATCGa > 6:13553/3‑149 (MQ=255) gCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGCAACATCGAcg > 5:149144/1‑149 (MQ=255) cACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGCAACATCGAcg < 7:142213/148‑1 (MQ=255) aCTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGCAACATCGACGCGGCCa < 8:127339/149‑1 (MQ=255) | CCAGAGCCTTACAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTAT‑TCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTG‑TGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGCAACATCGACGCGGCCA > NC_002947/558330‑558625 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |