| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 614,798 | G→C | 6.7% | P150R (CCG→CGG) | ispA ← | farnesyl diphosphate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 614,798 | 0 | G | C | 6.7% | 238.2 / 6.0 | 74 | P150R (CCG→CGG) | ispA | farnesyl diphosphate synthase |
| Reads supporting (aligned to +/- strand): ref base G (35/34); new base C (2/3); total (37/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.61e-01 | |||||||||||
ACTTGCCAGGGCGCCGAGGCGTACGCTGGCTTCGATCAGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAGGGCACTGAAAGCCAGGCTCTGCAAACCGTCGCCAGCAAGGATGGCGCACGCTTCGTCAAACGCCTTGT > NC_002947/614659‑614945 | aCTTGCCAGGGCGCCGAGGCGTACGCTGGCTTCGATCAGCGCTCCGGTCTTGTGCCGGTGCATGAACTACAGCGCCTGCTGGTCCAGCTTCTGGCCAACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCCGCCGGGCCGGCAg > 6:59948/1‑149 (MQ=255) cTTGCCAGGGCGCCGAGGCGTACGCTGGCTTCGATCAGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCCGGCCGGCatg < 6:64771/149‑3 (MQ=255) ttGCCAGGGCGCCGAGGCGTACGCTGGCTTCGATCAGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCt > 6:92632/1‑149 (MQ=255) cAGGGCGCCGAGGCGTACGCTGGCTTCGATCAGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTgg < 4:228212/149‑1 (MQ=255) aGGGCGCCGAGGCGTACGCTGGCTTCGATCAGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGccggccgg > 7:298339/1‑134 (MQ=255) aGGGCGCCGAGGCGTACGCTGGCTTCGATCAGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGccggccgg < 8:298339/134‑1 (MQ=255) aGGGCGCCGAGGCGTACGCTGGCTTCGATCAGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGc > 3:324819/1‑149 (MQ=255) gggCGCCGAGGCGTACGCTGGCTTCGATCAGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGc > 2:339609/1‑148 (MQ=255) gggCGCCGAGGCGTACGCTGGCTTCGATCAGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGc > 8:38864/1‑148 (MQ=255) gcgcCGAGGCGTACGCTGGCTTCGATCAGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAg < 4:39464/149‑1 (MQ=255) gcCGAGGCGTACGCTGGCTTCGATCAGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCCGGCCGGCatgg < 1:232977/139‑4 (MQ=255) gcCGAGGCGTACGCTGGCTTCGATCAGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCCGGCCGGCatgg > 2:232977/1‑136 (MQ=255) ccGAGGCGTACGCTGGCTTCGATCAGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAg > 8:140266/1‑146 (MQ=255) ccGAGGCGTACGCTGGCTTCGATCAGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAg < 7:140266/146‑1 (MQ=255) cGAGGCGTACGCTGGCTTCGATCAGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCAcc > 2:366490/1‑149 (MQ=255) cGAGGCGTACGCTGGCTTCGATCAGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCAcc > 7:79276/1‑149 (MQ=255) gCGTACGCTGGCTTCGATCAGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGaa > 7:48465/1‑149 (MQ=255) gTACGCTGGCTTCGATCAGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAAc > 2:291274/1‑148 (MQ=255) tACGCTGGCTTCGATCAGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCAGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCa > 4:66071/1‑149 (MQ=255) gCTGGCTTCGATCAGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCATCTTTGGCCAGCACCTGAACCATgg < 8:189084/149‑1 (MQ=255) cTGTCTTGGATCAGCGCGCGTGTCTTGTGCCGGTGCTTTAACTCCAGCGGCTGCTGGTCCAGCTTCTGGCGCACCGATCGGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGACGGCAGCTTTGGGCAGCACCTTAACCATGGc < 6:13497/149‑1 (MQ=255) gCTTCGATCAGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAg > 6:368325/1‑149 (MQ=255) ttCGATCAGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGc > 8:270068/1‑149 (MQ=255) tCGATCAGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGACAGGc > 7:313553/1‑148 (MQ=255) aTCAGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAAt < 4:324819/149‑1 (MQ=255) aTCAGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCCGGCCGGCatgg < 2:665/117‑4 (MQ=255) aTCAGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCCGGCCGGCatgg > 1:665/1‑114 (MQ=255) tCAGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATg < 4:119072/149‑1 (MQ=255) aGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGCACCATGGCCAGGCGAATGCt > 8:313502/1‑149 (MQ=255) cgcgcCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGt < 1:72013/149‑1 (MQ=255) cgcgcCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGt < 8:79276/149‑1 (MQ=255) gcCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGa < 1:291274/149‑1 (MQ=255) ggTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCt > 5:361122/1‑149 (MQ=255) tCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGa < 1:366490/149‑1 (MQ=255) ccGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCa < 4:157756/149‑1 (MQ=255) gCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGCACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGc > 5:260055/1‑147 (MQ=255) aTGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTg < 3:220586/126‑1 (MQ=255) aTGAACTCCAGCGCCTGCTGGTCCACCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTg > 4:220586/1‑126 (MQ=255) tGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAggg > 1:254563/1‑149 (MQ=255) gAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGt > 5:91503/1‑149 (MQ=255) aaCTCCAGCGCCTGCTGGTCCAGCTTCAGGCCCACCGCACCGCGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGTCAAggggc < 5:59948/149‑3 (MQ=255) cTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGa < 5:92632/149‑1 (MQ=255) tCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAg < 7:72825/137‑1 (MQ=255) tCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAg > 8:72825/1‑137 (MQ=255) ccAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAg > 5:253303/1‑148 (MQ=255) cAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGc < 1:339609/148‑1 (MQ=255) cAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGCGTCGAg > 3:263664/1‑147 (MQ=255) aGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAg > 4:45653/1‑127 (MQ=255) aGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAg < 3:45653/127‑1 (MQ=255) ctgGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCaa > 6:365512/1‑130 (MQ=255) ctgGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCaa < 5:365512/130‑1 (MQ=255) caggTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAGGGCACTg < 3:66071/146‑1 (MQ=255) gTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCTAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAgg < 8:182804/139‑1 (MQ=255) gTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCGAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAgg > 7:182804/1‑139 (MQ=255) tCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAGGGCACTGAAAGc < 4:220975/149‑1 (MQ=255) cAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAGGGCACTGaaa > 8:195202/1‑145 (MQ=255) cAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAGGGCACTGaaa < 7:195202/145‑1 (MQ=255) cAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAGGGCACTGAAAGCCa < 8:91720/149‑1 (MQ=255) aGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAGGGCACTGAAAGCCAg > 8:275820/1‑149 (MQ=255) cTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAGGGCACTGAAAGCCAGGctc < 7:275820/148‑1 (MQ=255) gCCCACCGAACCGAGATCGATGGCCTGGCCGCCACCCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCCCCTGAACCATGGCCAGGCGAAGGCTGTCGATCTGCGGGCTCAGGCTCGGGTCGAGCAGGGCCCTGAAAGCCAGGGTCTGc > 7:269963/1‑148 (MQ=255) ccACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCt < 1:39917/69‑1 (MQ=255) ccACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCt > 2:39917/1‑69 (MQ=255) ccACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAGGGCACTGAAAGCCAGGCTCTGCaaa < 7:270068/149‑1 (MQ=255) tCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAGGGCACTGAAAGCCAg > 5:176334/1‑125 (MQ=255) tCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAGGGCACTGAAAGCCAg < 6:176334/125‑1 (MQ=255) tggcctggccGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAGGGCACTGAAAGCCAGGCTCTGCAAACCGTCGCCAGCAAGGATg < 6:260055/149‑1 (MQ=255) cctgtccGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAGGGCACTGAAAGCCAGGCTCTGCAAACCGTCGCCAGCAAGGATGgc < 6:361122/148‑1 (MQ=255) ctggccGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTc > 7:302231/1‑96 (MQ=255) ctggccGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTc < 8:302231/96‑1 (MQ=255) tggccGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAGGGCACTGAAAGCCAGGCTCTGCAAACCGTCGCCAGCAAGGATGGCGCa > 1:233224/1‑149 (MQ=255) gccgccAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAGGGCACTGAAAGCCAGGCTCTGCAAACCGTCGCCAGCAAGGATGGCGCAc < 6:253303/148‑1 (MQ=255) cgccAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAGGGCACTGAAAGCCAGGCTCTGCAAACCGTCGCCAGCAAGGATGGCGCACGCt > 4:48073/1‑149 (MQ=255) gccAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAGGGCACTGAAAGCCAGGCTCTGCAAACCGTCGCCAGCAAGGATGGCGCACGCtt < 6:91503/149‑1 (MQ=255) cATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAGGGCACTGAAAGCCAGGCTCTGCAAACCGTCGCCAGCAAGGATGGCGCACGCTTCGTCa > 2:332373/1‑148 (MQ=255) tGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAGGGCACTGAAAGCCAGGCTCTGCAAACCGTCGCCAGCAAGGATGGCGCACGCTTCGTCAAAc < 2:254563/149‑1 (MQ=255) cgggccggCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAGGGCACTGAAAGCCAGGCTCTGCAAACCGTCGCCAGCAAGGATGGCGCACGCTTCGTCAAACGCCTtgt < 8:48465/149‑1 (MQ=255) | ACTTGCCAGGGCGCCGAGGCGTACGCTGGCTTCGATCAGCGCGCCGGTCTTGTGCCGGTGCATGAACTCCAGCGCCTGCTGGTCCAGCTTCTGGCCCACCGAACCGAGATCGATGGCCTGGCCGCCAACCATGCCGGCCGGGCCGGCAGCTTTGGCCAGCACCTGAACCATGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAGGGCACTGAAAGCCAGGCTCTGCAAACCGTCGCCAGCAAGGATGGCGCACGCTTCGTCAAACGCCTTGT > NC_002947/614659‑614945 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |