| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 625,064 | A→T | 7.0% | intergenic (‑158/+25) | PP_0537 ← / ← ppa | transcriptional regulator/inorganic pyrophosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 625,064 | 0 | A | T | 7.0% | 246.7 / 5.2 | 82 | intergenic (‑158/+25) | PP_0537/ppa | transcriptional regulator/inorganic pyrophosphatase |
| Reads supporting (aligned to +/- strand): ref base A (40/36); new base T (4/2); total (44/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
GCGGCGGGTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAAAGAAGTGC > NC_002947/624920‑625209 | gcggcgGGTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCg > 3:304014/1‑149 (MQ=255)gcggcgGGTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCg > 6:146016/1‑149 (MQ=255) cggcggGTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGTCATGAAAAACCCCGCCAAAGCgg < 2:369200/149‑1 (MQ=255) gTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTc > 2:106225/1‑149 (MQ=255) ccAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTGAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCt > 1:287568/1‑149 (MQ=255) ccAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGTGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTg < 1:81917/149‑1 (MQ=255) ccAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGTGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTg < 1:86980/149‑1 (MQ=255) ccAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCTTTGGCGGGGtttttcat < 3:142224/149‑6 (MQ=255) ccAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCt < 5:146016/148‑1 (MQ=255) cAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTg > 1:195705/1‑148 (MQ=255) gTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTccc > 7:24585/1‑144 (MQ=255) gTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTccc < 8:24585/144‑1 (MQ=255) ggAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCg > 3:270968/1‑148 (MQ=255) aaTGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAAt > 4:175783/1‑149 (MQ=255) gAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCTTTGGCGGGGtttttcatg < 5:193539/137‑7 (MQ=255) gAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCTTTGGCGGGGtttttcatg > 6:193539/1‑131 (MQ=255) aaCCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAg < 4:304014/148‑1 (MQ=255) aCCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGcc < 2:287568/149‑1 (MQ=255) gggTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTGCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCt < 1:106225/149‑1 (MQ=255) tgtTGACGGGATTTGTACGAAAAGAGGCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTa < 6:128352/149‑1 (MQ=255) gACGGGATTTGTACGAAAAGAGGCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGc < 2:188808/148‑1 (MQ=255) gACGGGATTTGTACGAAAAGAGGCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCa > 7:21555/1‑149 (MQ=255) cGAAAAGAGGCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTgg < 7:265076/149‑1 (MQ=255) gAAAAGAGGCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGt > 7:37961/1‑149 (MQ=255) aaaaGAGGCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAg < 7:243135/122‑1 (MQ=255) aaaaGAGGCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAg > 8:243135/1‑122 (MQ=255) agagGCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATc < 8:21555/149‑1 (MQ=255) ggCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATcgcg > 5:321469/1‑149 (MQ=255) tGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCa > 5:355257/1‑149 (MQ=255) gTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCAc > 5:167974/1‑149 (MQ=255) gtgtAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGgcgc > 3:339372/1‑149 (MQ=255) gtAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCt > 8:176930/1‑149 (MQ=255) cTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTg < 6:88918/76‑1 (MQ=255) cTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTg > 5:88918/1‑76 (MQ=255) tgtAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCt > 7:299326/1‑149 (MQ=255) gtAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCtt > 8:354720/1‑149 (MQ=255) gtAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCtt > 3:128627/1‑149 (MQ=255) tAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCAAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTc > 5:177818/1‑149 (MQ=255) aGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTc > 8:259972/1‑148 (MQ=255) ggATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCg < 3:175783/148‑1 (MQ=255) gATTTGTTCCCAGCAGTGAGCGCGTT‑CCAATCAGGCATGAAAACCCCCTCCAAAGCTGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCTGCGCCTTCCCAGCCTTCGAt < 5:288548/149‑1 (MQ=255) aTTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATc < 6:167974/149‑1 (MQ=255) tttGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCt < 8:37961/149‑1 (MQ=255) tttGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCt > 4:321445/1‑149 (MQ=255) ccAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGggcgg < 8:7480/115‑1 (MQ=255) ccAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGggcgg > 7:7480/1‑115 (MQ=255) ccAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCa > 6:235359/1‑149 (MQ=255) ccAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCa > 2:255055/1‑149 (MQ=255) ccAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCa > 8:159033/1‑149 (MQ=255) cagcagTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGAccc < 8:163411/147‑1 (MQ=255) cagcagTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGAccc > 7:163411/1‑147 (MQ=255) agcagTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACt > 7:179247/1‑149 (MQ=255) agcagTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACt > 5:226295/1‑149 (MQ=255) cagTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTg > 6:72207/1‑149 (MQ=255) tGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGccc > 3:183804/1‑149 (MQ=255) gcgcGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCtt > 8:152297/1‑148 (MQ=255) gcgcGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTtc > 5:199090/1‑149 (MQ=255) gcgTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTtctc > 2:233933/1‑149 (MQ=255) gcgTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTtctc < 4:270968/149‑1 (MQ=255) tt‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTtctc > 2:112717/1‑146 (MQ=255) cATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGAt < 4:339372/148‑1 (MQ=255) tCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCttt < 7:354720/149‑1 (MQ=255) cAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCttt < 7:152297/148‑1 (MQ=255) cAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCttt < 4:183804/148‑1 (MQ=255) aGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTg < 6:199090/148‑1 (MQ=255) ggCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTa < 6:321469/149‑1 (MQ=255) gCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGCCCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAg > 5:103547/1‑149 (MQ=255) gCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAg < 6:355257/149‑1 (MQ=255) gcagggaaaCCCCGCTTTGGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGGGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGt > 1:118488/7‑149 (MQ=255) aTGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCttt < 1:148688/143‑1 (MQ=255) tGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTg > 1:303950/1‑149 (MQ=255) gAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTg < 2:337190/67‑1 (MQ=255) gAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTg > 1:337190/1‑67 (MQ=255) ggaaaCCCCGCTTTGGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTgg > 6:135221/3‑148 (MQ=255) ggaaaCCCCGCTTTGGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTgg > 3:131454/3‑148 (MQ=255) aaaaaCCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTgg < 8:179247/148‑1 (MQ=255) aaaaaCCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTgg < 2:119582/148‑1 (MQ=255) cccGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCTACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAaagaa < 5:235359/149‑1 (MQ=255) gCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAAAGAAGTg < 5:72207/149‑1 (MQ=255) gCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAAAGAAGTg < 4:128627/149‑1 (MQ=255) ccAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAAAGAAGTGc < 7:176930/149‑1 (MQ=255) cAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTTATAGCGGCACGGGCGGCGTCCGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTATCGACATCTTTGTAGTTGGCAAAGAAGTGc > 1:66494/1‑148 (MQ=255) | GCGGCGGGTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGT‑AGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTT‑CCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAAAGAAGTGC > NC_002947/624920‑625209 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |