| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 788,581 | C→A | 5.6% | intergenic (+31/‑182) | ettA → / → gdhA | ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 788,581 | 0 | C | A | 5.6% | 228.3 / 2.8 | 71 | intergenic (+31/‑182) | ettA/gdhA | ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base C (35/32); new base A (2/2); total (37/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.85e-01 | |||||||||||
TCGAACGTGGTGTTCTTCGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGC‑GTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTCCT > NC_002947/788434‑788729 | tCGAACGTGGTGTTCTTCGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGC‑GTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGccc > 2:99663/1‑148 (MQ=255)tCGAACGTGGTGTTCTTCGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGC‑GTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGccc > 2:135583/1‑148 (MQ=255) cGTGGTGTTCTTCGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGC‑GTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTg < 3:324221/149‑1 (MQ=255) ggtgTTCTTCGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGC‑GTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGcc < 7:346874/149‑1 (MQ=255) ttcGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGC‑GTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCAtttt > 1:154814/1‑149 (MQ=255) cGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGC‑GTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTtg > 2:327900/1‑149 (MQ=255) gAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGC‑GTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTtgt < 3:12250/149‑1 (MQ=255) gAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGC‑GTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTtgt > 5:112664/1‑149 (MQ=255) gTAACTACACCGAGTACGAAGCCGACCGCAAGAAGC‑GTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCt < 3:293264/149‑1 (MQ=255) gTAACTACACCGAGTACGAAGCCGACCGCAAGAAGC‑GTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCt > 6:242265/1‑149 (MQ=255) aaCTACACCGAGTACGAAGCCGACCGCAAGAAGCAGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTg > 1:238330/1‑149 (MQ=255) cTACACCGAGTACGAAGCCGACCGCAAGAAGC‑GTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCg > 1:147795/1‑149 (MQ=255) acCGAGTACGAAGCCGACCGCAAGAAGC‑GTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGt < 4:91875/123‑1 (MQ=255) acCGAGTACGAAGCCGACCGCAAGAAGC‑GTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGt > 3:91875/1‑123 (MQ=255) acCGAGTACGAAGCCGACCGCAAGAAGC‑GTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGAcc < 2:158027/149‑1 (MQ=255) gAGTACGAAGCCGACCGCAAGAAGC‑GTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGc > 4:19195/1‑148 (MQ=255) gAAGCCGACCGCAAGAAGC‑GTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGcc < 3:128169/131‑1 (MQ=255) gAAGCCGACCGCAAGAAGC‑GTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGcc > 4:128169/1‑131 (MQ=255) gAAGCCGACCGCAAGAAGC‑GTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAAt > 1:67819/1‑149 (MQ=255) aGCCGACCGCAAGAAGC‑GTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATgg < 1:327900/149‑1 (MQ=255) cGACCGCAAGAAGC‑GTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTAGCGGACCGCTATAAATggcga < 1:88736/149‑1 (MQ=255) aCCGCAAGAAGC‑GTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCACTTGGGGCCCCAttc < 7:184284/117‑2 (MQ=39) aCCGCAAGAAGC‑GTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCACTTGGGGCCCCAttc > 8:184284/1‑116 (MQ=39) ccGCAAGAAGC‑GTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATggcgaggc < 4:365203/149‑1 (MQ=255) gaagC‑GTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCAAAAGAAGAATGGCCCAGTAAGCCGGTTTTATGATGCACAAGAATGGGGCCCCAATTGGCCCCATTTTTGTGACTGGCGGACCGATATAAATGGCGAGGCGAAgg > 1:278180/1‑149 (MQ=255) agC‑GTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGgtgt > 8:207436/1‑149 (MQ=255) c‑GTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTAt < 1:135583/149‑1 (MQ=255) ggTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGta < 3:19195/149‑1 (MQ=255) ggTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGta < 1:99663/149‑1 (MQ=255) ggTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGta < 2:154814/149‑1 (MQ=255) ggTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGta < 2:238330/149‑1 (MQ=255) tgctgctgcCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACAGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATacac > 2:150956/1‑149 (MQ=255) gctgctgcCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATaca < 3:96992/147‑1 (MQ=255) gctgctgcCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATaca > 4:96992/1‑147 (MQ=255) gctgctgcCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACt > 6:91312/1‑149 (MQ=255) tgcCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACa > 5:255281/1‑148 (MQ=255) gcCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACAt > 8:315436/1‑148 (MQ=255) gcCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACAt > 8:1758/1‑148 (MQ=255) gcCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACAt > 4:152734/1‑148 (MQ=255) gCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCa > 6:257483/1‑148 (MQ=255) cGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTCATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCaaa < 5:91312/149‑1 (MQ=255) gtgtACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCaaa > 5:271631/1‑148 (MQ=255) tgtACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAaat > 2:319238/1‑148 (MQ=255) cGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAAtt < 6:255281/148‑1 (MQ=255) caAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATac > 7:313435/1‑117 (MQ=255) gAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCaaaaaaa > 2:111668/1‑149 (MQ=255) gCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACAtt > 4:66536/1‑149 (MQ=255) cccAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAg > 4:14426/1‑91 (MQ=255) cccAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACAttt < 5:257483/149‑1 (MQ=255) ccAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATgg < 3:54037/80‑1 (MQ=255) ccAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATgg > 4:54037/1‑80 (MQ=255) gTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGcc < 7:315436/149‑1 (MQ=255) aGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTa < 2:67819/149‑1 (MQ=255) gTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCg > 5:114663/1‑149 (MQ=255) cTGATCTACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGc < 5:290836/148‑1 (MQ=255) gATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGAt > 1:24651/1‑149 (MQ=255) caggCACAAAAATGGGGCCACTTGGGGCCCCATTCTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGAt > 8:148281/4‑149 (MQ=38) aTGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTTGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGAt < 1:319238/148‑1 (MQ=255) aTGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGa < 6:271631/147‑1 (MQ=255) aTGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGAtt < 2:278180/149‑1 (MQ=255) aTGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGAtt < 7:207436/149‑1 (MQ=255) acaAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAAtt > 3:80575/1‑108 (MQ=255) acaAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGc < 6:159233/147‑1 (MQ=255) acaAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGc > 5:159233/1‑147 (MQ=255) acaAAAATGGGGCCACTTGGGGCCCCATTCTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGctt < 7:148281/149‑1 (MQ=39) caAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGc > 6:290836/1‑140 (MQ=255) aaGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAaataa < 6:358609/104‑1 (MQ=255) aaGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAaataa > 5:358609/1‑104 (MQ=255) aGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATggcgaggc < 4:260024/60‑1 (MQ=255) aGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATggcgaggc > 3:260024/1‑60 (MQ=255) taaTGTGGCACCAAGTGGCACAATTTTTGTGCCTGGCGGACAGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTg < 5:242265/148‑1 (MQ=255) gAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCaaaaaaa < 2:132309/113‑1 (MQ=255) gAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACAAAATAATTTCaaaaaaa > 1:132309/1‑113 (MQ=255) ccAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTCCt > 6:368422/1‑149 (MQ=255) | TCGAACGTGGTGTTCTTCGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGC‑GTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAA‑ACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTCCT > NC_002947/788434‑788729 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |