Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,120,933 T→A 8.5% V125D (GTT→GAT) ‡ PP_0982 → YjgP/YjgQ family permease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,120,9330TA 8.5% 173.8 / 5.8 59V125D (GTT→GAT) ‡PP_0982YjgP/YjgQ family permease
Reads supporting (aligned to +/- strand):  ref base T (27/27);  new base A (2/3);  total (29/30)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.76e-01

CGGGCGCCTGTACCTGGAAAGCGAGATGACCGTGCTGTCGGCCACTGGCATGAGCCAGCAGCGCCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTGCCGGGCCGCTTCCAGACCTTGCGTGATGGCTCGCGGGTAACCTATACCGAGCAACTGTCGGATGACCGCATCAACCTGGGCGGGGT  >  NC_002947/1120787‑1121080
                                                                                                                                                  |                                                                                                                                                   
cGGGCGCCTGTACCTGGAAAGCGAGATGACCGTGCTGTCGGCCACTGGCATGAGCCAGCAGCGCCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTg                                                                                                                                                   <  3:145090/149‑1 (MQ=255)
 gggCGCCTGTACCTGGAAAGCGAGATGACCGTGCTGTCGGCCACTGGCATGAGCCAGCAGCGCCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGc                                                                                                                                                  >  7:127736/1‑149 (MQ=255)
       cTGTACCTGGAAAGCGAGATGACCGTGCTGTCGGCCACTGGCATGAGCCAGCAGCGCCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCAACGCCCAggg                                                                                                                                            <  6:35970/149‑2 (MQ=255)
       cTGTACCTGGAAAGCGAGATGACCGTGCTGTCGGCCACTGGCATGAGCCAGCAGCGCCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCAACGCCCAggg                                                                                                                                            <  4:30555/149‑2 (MQ=255)
            ccTGGAAAGCGAGATGACCGTGCTGTCGGCCACTGGCATGAGCCAGCAGCGCCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTgcag                                                                                                                                        >  6:372698/1‑148 (MQ=255)
                     cGAGATGACCGTGCTGTCGGCCACTGGCATGAGCCAGCAGCGCCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGAtcatca                                                                                                                              <  4:160887/149‑1 (MQ=255)
                       agaTGACCGTGCTGTCGGCCACTGGCATGAGCCAGCAGCGCCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATcagc                                                                                                                            <  7:278463/149‑1 (MQ=255)
                       agaTGACCGTGCTGTCGGCCACTGGCATGAGCCAGCAGCGCCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATcagc                                                                                                                            >  4:304845/1‑149 (MQ=255)
                         aTGACCGTGCTGTCGGCCACTGGCATGAGCCAGCAGCGCCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATcagcca                                                                                                                          <  8:5810/149‑1 (MQ=255)
                                tGCTGTCGGCCACTGGCATGAGCCAGCAGCGCCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGAt                                                                                                                   <  6:17828/149‑1 (MQ=255)
                                   tGTCGGCCACTGGCATGAGCCAGCAGCGCCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGcc                                                                                                                >  2:24618/1‑149 (MQ=255)
                                     tCGGCCACTGGCATGAGCCAGCAGCGCCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCt                                                                                                              >  1:74268/1‑149 (MQ=255)
                                           aCTGGCATGAGCCAGCAGCGCCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATcagccagc                                                                                                                        <  8:29366/133‑1 (MQ=255)
                                           aCTGGCATGAGCCAGCAGCGCCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATcagccagc                                                                                                                        >  7:29366/1‑133 (MQ=255)
                                             tGGCATGAGCCAGCAGCGCCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGt                                                                                                      >  3:337287/1‑149 (MQ=255)
                                               gCATGAGCCAGCAGCGCCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTc                                                                                                    >  5:207928/1‑149 (MQ=255)
                                                 aTGAGCCAGCAGCGCCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGatcatc                                                                                                                               >  8:190026/1‑120 (MQ=255)
                                                 aTGAGCCAGCAGCGCCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGatcatc                                                                                                                               <  7:190026/120‑1 (MQ=255)
                                                 aTGAGCCAGCAGCGCCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGa                                                                                                  <  2:74268/149‑1 (MQ=255)
                                                  tGAGCCAGCAGCGCCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGa                                                                                                  >  5:176011/1‑148 (MQ=255)
                                                    aGCCAGCAGCGCCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGAcc                                                                                                          >  1:97839/1‑138 (MQ=255)
                                                    aGCCAGCAGCGCCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGAcc                                                                                                          <  2:97839/138‑1 (MQ=255)
                                                       cagcagCGCCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCtt                                                                                            <  3:304845/149‑1 (MQ=255)
                                                        agcagcGCCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTg                                                                                           <  8:127736/149‑1 (MQ=255)
                                                          cagcGCCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGt                                                                                         >  3:21584/1‑149 (MQ=255)
                                                           agcGCCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTg                                                                                        <  2:207297/149‑1 (MQ=255)
                                                             cgcCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTGcc                                                                                      <  5:372698/149‑1 (MQ=255)
                                                               ccTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTGCCgg                                                                                    <  1:193344/149‑1 (MQ=255)
                                                                 tgctgGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTg                                                                                           >  1:244174/1‑140 (MQ=255)
                                                                 tgctgGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTg                                                                                           <  2:244174/140‑1 (MQ=255)
                                                                        cATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTGCCGGGCCGCTTcc                                                                           <  5:58908/149‑1 (MQ=255)
                                                                           gACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTGCCGGGCCGCTTCCAGa                                                                        >  8:330533/1‑149 (MQ=255)
                                                                               aTGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCAACGCCCAgggg                                                                                                                                           >  5:219678/1‑76 (MQ=255)
                                                                               aTGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCAACGCCCAgggg                                                                                                                                           <  6:219678/78‑3 (MQ=255)
                                                                                  gcgcCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTGCCGGGCCGCTTCCAGACCTTGCg                                                                 <  1:24618/149‑1 (MQ=255)
                                                                                  gcgcCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTGCCGGGCCGCTTCCAGACCTTGCg                                                                 >  8:223642/1‑149 (MQ=255)
                                                                                      cGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTgg                                                                                          >  5:235405/1‑120 (MQ=255)
                                                                                      cGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTgg                                                                                          <  6:235405/120‑1 (MQ=255)
                                                                                            cccTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCTGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTGCCGGGCCGCTTCCAGACCTTGCGt                                                                <  5:296389/140‑1 (MQ=255)
                                                                                            cccTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTGCCGGGCCGCTTCCAGACCTTGCGt                                                                >  6:296389/1‑140 (MQ=255)
                                                                                             ccTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTGCCGGGCCGCTTCCAGACCTTGCGTGATGGCTcgc                                                      <  4:21584/149‑1 (MQ=255)
                                                                                                 gTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTGCCGGGCCGCTTCCAGACCTTGCGTGATGGCTCGCggg                                                   <  3:220099/148‑1 (MQ=255)
                                                                                                 gTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTGCCGGGCCGCTTCCAGACCTTGCGTGATGGCTCGCggg                                                   <  4:337287/148‑1 (MQ=255)
                                                                                                    gCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTGCCGGGCCGCTTCCAGACCTTGCGTGATGGCTCGCGGGTAAc                                               >  4:18042/1‑149 (MQ=255)
                                                                                                      ccTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGAGCATCAGCCCGCAGGATGACCTGACCGAGTTCGCCACCTTGGTGCCGGGCCGCTTCCAGACCTTGCGTGATGGCTCGCGGGTAAcg                                              >  7:239674/1‑147 (MQ=255)
                                                                                                          ctgGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTGCCGGGCCGCTTCCAGACCTTGCGTGATGGCTCGCGGGTaa                                                <  3:297166/142‑1 (MQ=255)
                                                                                                          ctgGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTGCCGGGCCGCTTCCAGACCTTGCGTGATGGCTCGCGGGTaa                                                >  4:297166/1‑142 (MQ=255)
                                                                                                          ctgGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTGCCGGGCCGCTTCCAGACCTTGCGTGATGGCTCGCGGGTAACCTATAc                                         <  6:176011/149‑1 (MQ=255)
                                                                                                                  cTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTGCCGGGCCGc                                                                               >  6:213328/1‑103 (MQ=255)
                                                                                                                  cTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTGCCGGGCCGCTTCCAGACCTTGCGTGATGGCTCGCGGGTAACCTATACCGAGc                                    >  6:191794/1‑146 (MQ=255)
                                                                                                                  cTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTGCCGGGCCGCTTCCAGACCTTGCGTGATGGCTCGCGGGTAACCTATACCGAGc                                    <  5:191794/146‑1 (MQ=255)
                                                                                                                            cctagcctgGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTGCCGGGCCGCTTCCAGACCTTGCGTGATGGCTCGCGGGTAACCTATACCGAg                                     <  4:221855/132‑1 (MQ=255)
                                                                                                                                 cctgGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTGCCGGGCCGCTTCCAGACCTTGCGTGATGGCTCGCGGGTAACCTATACCGAGCAACTGTCGGATGACCGCa                  >  3:62413/1‑149 (MQ=255)
                                                                                                                                   tgctgcaccTGGGCAACGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTGCCGGGCCGCTTCCAGACCTTGCGTGATGGCTCGCGGGTAACCTATACCGAGCAACTGTCGGATGACCGCAt                 >  7:272881/8‑148 (MQ=255)
                                                                                                                                    ggCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTGCCGGGCCGCTTCCAGACCTTGCGTGATGGCTCGCGGGTAACCTATACCGAGCAACTGTCGGATGACCGCATc                >  4:114753/1‑148 (MQ=255)
                                                                                                                                    ggCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTGCCGGGCCGCTTCCAGACCTTGCGTGATGGCTCGCGGGTAACCTATACCGAGCAACTGTCGGATGACCGCATCa               >  3:351164/1‑149 (MQ=255)
                                                                                                                                              ggCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTGCCGGGCCGCTTCCAGACCTTGCGTGATGGCTCGCGGGTAACCTATACCGAGCAACTGTCGGATGACCGCATCAACCTGGGCgg     <  7:330533/149‑1 (MQ=255)
                                                                                                                                                cGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTGCCGGGCCGCTTCCAGACCTTGCGTGATGGCTCGCGGGTAACCTATACCGAGCAACTGTCGGATGACCGCATCAACCTGGGCgggg   >  6:131849/1‑149 (MQ=255)
                                                                                                                                                 gTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTGCCGGGCCGCTTCCAGACCTTGCGTGATGGCTCGCGGGTAACCTATACCGAGCAACTGTCGGATGACCGCATCAACCTGGGCGGGgt  >  6:359681/1‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
CGGGCGCCTGTACCTGGAAAGCGAGATGACCGTGCTGTCGGCCACTGGCATGAGCCAGCAGCGCCTGCTGGGCATGACCATGGCGCCGGCTGCCCTGGTTGCCCTGCTGGTGGCCTGGCTGAGCCTGAGCCTGGCCCCCCTGGGCGTTGCCCAGGTGCAGCAGATCATCAGCCAGCAGGATGCCCTGACCGAGTTCGACACCTTGGTGCCGGGCCGCTTCCAGACCTTGCGTGATGGCTCGCGGGTAACCTATACCGAGCAACTGTCGGATGACCGCATCAACCTGGGCGGGGT  >  NC_002947/1120787‑1121080

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑