| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,209,007 | C→G | 7.6% | intergenic (‑7/‑385) | PP_1058 ← / → ytnA | hypothetical protein/amino acid permease YtnA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,209,007 | 0 | C | G | 7.6% | 194.2 / 4.2 | 63 | intergenic (‑7/‑385) | PP_1058/ytnA | hypothetical protein/amino acid permease YtnA |
| Reads supporting (aligned to +/- strand): ref base C (27/31); new base G (2/3); total (29/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01 | |||||||||||
AACCAGCGCCACCAGCAGGATGAGGATGATCAGCCGCCACCATAGCCGACGCTG‑ACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTAAGAAGAAGGAAAAAGTCATGTGGGGCTATGCGGCTTTGGTGTGGGTTCCTTCAACGGACGATGTTGCTATGGTGCC > NC_002947/1208860‑1209154 | aaCCAGCGCCACCAGCAGGATGAGGATGATCAGCCGCCACCATAGCCGACGCTG‑ACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAAtcttc > 3:81200/1‑148 (MQ=255) aCCAGCGCCACCAGCAGGATGAGGATGATCAGCCGCCACCATAGCCGACGCTGAACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAAtcttc > 1:282955/1‑148 (MQ=255) cAGCGCCACCAGCAGGATGAGGATGATCAGCCGCCACCATAGCCGACGCTG‑ACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATc > 4:20165/1‑149 (MQ=255) gcgcCACCAGCAGGATGAGGATGATCAGTCGCCACCATAGCCGACGCTG‑ACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCg > 6:337275/1‑149 (MQ=255) ccaccaGCAGGATGAGGATGATCAGCCGCCACCATAGCCGACGCTG‑ACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGc > 2:228057/1‑148 (MQ=255) accaGCAGGATGAGGATGATCAGCCGCCACCATAGCCGACGCTG‑ACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGcc > 7:171565/1‑147 (MQ=255) accaGCAGGATGAGGATGATCAGCCGCCACCATAGCCGACGCTG‑ACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCaa < 7:147858/149‑1 (MQ=255) ccaGCAGGATGAGGATGATCAGCCGCCACCATAGCCGACGCTG‑ACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAg > 4:21067/1‑149 (MQ=255) cagcagGATGAGGATGATCAGCCGCCACCATAGCCGACGCTG‑ACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATATTCTTCTATCCGGCCAAg > 8:66828/1‑148 (MQ=255) cagGATGAGGATGATCAGCCGCCACCATAGCCGACGCTG‑ACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCaa < 6:236923/144‑1 (MQ=255) cagGATGAGGATGATCAGCCGCCACCATAGCCGACGCTG‑ACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCaa > 5:236923/1‑144 (MQ=255) cagGATGACGATGATCAGACGCCACCATAGCAGACCCTG‑ACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTTGTTCCGATTGCCACAGTGCGCCCATAATCATCTATCCCGCCAAGTAtt > 8:276998/1‑149 (MQ=255) aggatgaggatgATCAGCCGCCACCATAGCCGACGCTG‑ACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTAttt > 3:221305/1‑149 (MQ=255) ggatgaggatgaTCAGCCGCCACCATAGCCGACGCTG‑ACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTAtttt < 5:359568/149‑1 (MQ=255) aggatgaTCAGCCGCCACCATAGCCGACGCTG‑ACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTct < 8:348405/149‑1 (MQ=255) atCAGCCGCCACCATAGCCGACGCTG‑ACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTcttgctt < 5:92221/148‑1 (MQ=255) tCAGCCGCCACCATAGCCGACGCTG‑ACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGt < 2:282955/149‑1 (MQ=255) gccgccACCATAGCCGCAGCTG‑ACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTGTATCCGGCCAAGTATTTTCGTCTTGCTTTTCTg < 7:276998/149‑1 (MQ=255) cgccACCATAGCCGACGCTG‑ACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGaa < 3:23522/149‑1 (MQ=255) gccACCATAGCCGACGCTG‑ACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAg > 3:18767/1‑149 (MQ=255) ccaccaTAGCCGACGCTG‑ACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGATTGTCTGAAGc > 1:88423/1‑149 (MQ=255) ccaTAGCCGACGCTG‑ACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATATTCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTa < 7:66828/149‑1 (MQ=255) ccaTAGCCGACGCTG‑ACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTa < 1:228057/149‑1 (MQ=255) caTAGCCGACGCTG‑ACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCt > 8:178411/1‑146 (MQ=255) ccGTCGCTG‑ACTGGGGGTCTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGtt < 4:69795/149‑1 (MQ=255) ccGACGCTG‑ACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGtt < 3:21067/149‑1 (MQ=255) cGCTG‑ACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGt < 8:171565/149‑1 (MQ=255) tG‑ACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGa > 5:350067/1‑149 (MQ=255) ggggACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGt > 6:6306/1‑149 (MQ=255) ggggACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGt < 5:337275/149‑1 (MQ=255) aCTTGGGTTGTGGCGGCTCGGCCGGAGATATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGaaa < 8:351418/149‑1 (MQ=255) ttGGGTAGTGGCGTCTCGGCCGGAGGTATCTCGGTTGCTTCCGTTATGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAATTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGaaaaa > 8:253148/1‑149 (MQ=255) ttGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAAttt < 1:201924/147‑1 (MQ=255) ttGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAAttt > 2:201924/1‑147 (MQ=255) ggCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTaagaagaag < 5:6306/146‑1 (MQ=255) cGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTAAGAAGAAGGaaaaa < 4:81200/149‑1 (MQ=255) aGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTAAGAAGAAGGAAAAAGTc < 4:18767/149‑1 (MQ=255) tATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTaagaaga < 4:29732/135‑1 (MQ=255) tATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTaagaaga > 3:29732/1‑135 (MQ=255) aTCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTAAGAAGAAGGAAAAAGTCAtgt > 7:66730/1‑149 (MQ=255) gggTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTaag > 5:366922/1‑125 (MQ=255) gggTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTaag < 6:366922/125‑1 (MQ=255) gTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTAAGAAGAAGGAAAAAGTCATGTggg > 7:94172/1‑145 (MQ=255) gTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATACGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTAAGAAGAAGGAAAAAGTCATGTGGGGCTa > 1:97471/1‑149 (MQ=255) gTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCACATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTAAGAAGAAGGAAAAAGTCATGTggg < 8:94172/145‑1 (MQ=255) cTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTAAGAAGAAGGAAAAAGTCATGTGGGGCTATGc < 3:20165/149‑1 (MQ=255) cTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTAAGAAGAAGGAAAAAGTCATGTGGGGCTATGc < 7:178411/149‑1 (MQ=255) gTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTAAGAAGAAGGAAAAAGTCATGTGGGGCTATGCGGCtt < 6:350067/149‑1 (MQ=255) tgcTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTAAGAAGAAGGAAAAAGTCATGTGGGGCTATGCGGCttt < 4:221305/147‑1 (MQ=255) gCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTAAGAAGAAGGaaaaa > 6:213699/1‑122 (MQ=255) gCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTAAGAAGAAGGaaaaa < 5:213699/122‑1 (MQ=255) gCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTAAGAAGAAGGAAAAAGTCATGTGGGGCTATGCGGCTTTGgtg > 4:176614/1‑149 (MQ=255) gTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTAAGAAGAAGGAAAAAGTCATGTGGGGCTATGCGGCt < 3:29210/138‑1 (MQ=255) gTTCCCATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCATGTCTGAAGCTTAGACCTACACTGCATAGCCTGAAAAATATGTAAGAAGAAGGAAAAACTCATCTGGCGCAATGCggat > 4:29210/1‑136 (MQ=255) ccGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTAGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTAAGAAGAAGGAAAAAGTCATGTGGGGCTATGCGGCTTTTGTGTGGGTTc < 8:66730/148‑1 (MQ=255) cacaGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTAAGAAGAAGGAAAAAGTCATGTGGGGCTATGCGGCTTTg < 7:287654/130‑1 (MQ=255) cacaGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTAAGAAGAAGGAAAAAGTCATGTGGGGCTATGCGGCTTTg > 8:287654/1‑130 (MQ=255) ccATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTAAGAAGAAGGAAAAAGTCATGTGGGGCTATGCGGCTTTGGTGTGGGTTCCTTCAACGGACGATGTTGc > 5:224546/1‑149 (MQ=255) aTAATCTTGTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAg < 1:225812/65‑1 (MQ=255) aTAATCTTGTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAg < 1:231093/65‑1 (MQ=255) aTAATCTTGTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAg > 2:225812/1‑65 (MQ=255) aTAATCTTGTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAg > 2:231093/1‑65 (MQ=255) aTAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGtt < 8:41903/55‑1 (MQ=255) aTAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGtt > 7:41903/1‑55 (MQ=255) aTAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTAAGAAGAAGGAAAAAGTCATGTGGGGCTATGCGGCTTTGGTGTGGGTTCCTTCAACGGACGATGTTGCTa < 2:97471/149‑1 (MQ=255) ttctATCCGGCCAAGTATTTTCGTCTTGGTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTAAGAAGAAGGAAAAAGTCATGTGGGGCTATGGGGCTTTGGTGTCGGTTCCTTCAACGGACGATGTTGCTATGGTGc > 6:294550/1‑149 (MQ=255) ttctATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTCGCCGGTGAGTGGATAGGGTGAAAAATATGTAAGAAGAAGGAAAAAGTCAtgt > 7:217989/1‑95 (MQ=255) ttctATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTAAGAAGAAGGAAAAAGTCAtgt < 8:217989/95‑1 (MQ=255) ttctATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTAAGAAGAAGGAAAAAGTCATGTGGGGCTATGCGGCTTTGGTGTGGGTTCCTTCAACGGACGATGTTGCTATGGTGc > 5:9604/1‑149 (MQ=255) tctATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTAAGAAGAAGGAAAAAGTCATGTGGGGCTATGCGGCTTTGGTGTGGGTTCCTTCAACGGACGATGTTGCTATGGTGcc > 5:7714/1‑149 (MQ=255) tctATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTAAGAAGAAGGAAAAAGTCATGTGGGGCTATGAGGCTTTGGTGTGGGTTCCTTCAACGGACGATGTTGCTATGGTGcc > 3:339011/1‑149 (MQ=255) | AACCAGCGCCACCAGCAGGATGAGGATGATCAGCCGCCACCATAGCCGACGCTG‑ACGGGGGGACTTGGGTTGTGGCGTCTCGGCCGGAGGTATCTCGGGTGCTTCCGTTCTGCTTGGTTCCGATTGCCACAGTGCGCCCATAATCTTCTATCCGGCCAAGTATTTTCGTCTTGCTTGTCTGAAGCTTAGACGTTGAGTGGATAGGGTGAAAAATTTGTAAGAAGAAGGAAAAAGTCATGTGGGGCTATGCGGCTTTGGTGTGGGTTCCTTCAACGGACGATGTTGCTATGGTGCC > NC_002947/1208860‑1209154 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |