| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,225,473 | G→T | 6.6% | intergenic (‑49/+97) | gltJ ← / ← gltI | glutamate/aspartate ABC transporter permease/glutamate/aspartate ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,225,473 | 0 | G | T | 6.6% | 237.6 / 5.3 | 76 | intergenic (‑49/+97) | gltJ/gltI | glutamate/aspartate ABC transporter permease/glutamate/aspartate ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (37/34); new base T (3/2); total (40/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.31e-01 | |||||||||||
ATGGTCCAGCCCAGGCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGATCAGTTT > NC_002947/1225327‑1225620 | atggTCCAGCCCAGGCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCgggg < 6:144278/149‑1 (MQ=255) gTCCAGCCCAGGCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGCACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGgc < 3:301276/148‑1 (MQ=255) tCCAGCCCAGGCCGGTGATGTACCAGTCCAGATAGGTTACGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGATGTAATTCATCGGGATTTCCCCACAGACGGTTGTTTCACGGGCACATTCGAG‑CACCCggcgcgc > 5:234094/1‑143 (MQ=255) tCCAGCCCAGGCCGGTGATGTACCAGTCCAGATAGGTGTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACCGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGgcg > 7:89860/1‑148 (MQ=255) ccAGCCCAGGCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGgcgc > 3:63673/1‑148 (MQ=255) aagtgCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGgcg > 6:236971/5‑149 (MQ=255) tACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGAt < 1:213111/144‑1 (MQ=255) tACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGAt > 2:213111/1‑144 (MQ=255) tACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAg > 8:2935/1‑149 (MQ=255) ccATTCCAGATATGTTTCGCTGCGCACTCCTGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATGCGGGGTCGCAAGGCGCCCACGGATGAAAgg < 6:101474/148‑1 (MQ=255) ccAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGt < 4:63673/149‑1 (MQ=255) ccAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGt > 7:28428/1‑149 (MQ=255) cAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGtt < 8:28428/149‑1 (MQ=255) cAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGt > 4:357659/1‑148 (MQ=255) cAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGt > 4:83150/1‑148 (MQ=255) aGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTa < 7:27758/149‑1 (MQ=255) aGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTa < 3:83150/149‑1 (MQ=255) gTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGt > 1:245061/1‑146 (MQ=255) tCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGa > 7:106033/1‑149 (MQ=255) aGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGacac < 8:204989/149‑1 (MQ=255) gATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGTTTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGacac > 6:171193/1‑148 (MQ=255) gATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCACAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGTGCACCTTCGAG‑CATCCGGGGGCGCAAGTCGCCCAAGGATGAAAGGATAGacac > 6:361445/1‑148 (MQ=255) tAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTaa < 3:357659/149‑1 (MQ=255) ggTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAAt < 1:351866/148‑1 (MQ=255) gTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACTGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGa < 5:236971/149‑1 (MQ=255) tCGCTGCCCACGCCGGTGGACTTGAAGAACACGGCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CA‑CCCGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTg < 6:234094/148‑1 (MQ=255) cccACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGTTTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCt < 5:171193/147‑1 (MQ=255) cccACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGaa > 7:296709/1‑123 (MQ=255) cccACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGaa < 8:296709/123‑1 (MQ=255) cccACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTg > 5:204882/1‑148 (MQ=255) gACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTc < 7:78907/148‑1 (MQ=255) gaagaaCACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTc > 6:356932/1‑149 (MQ=255) aaCACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGt > 5:35488/1‑147 (MQ=255) agacGCCCCAGGCCCAGTAGTAATTCATCGGGATTTCCCCTCAGACGCTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCTAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTTGCCTGCAGAATTGATTCGTGCTCGTGAg < 8:89860/147‑1 (MQ=255) acGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTg > 1:17203/1‑119 (MQ=255) acGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTg < 2:17203/119‑1 (MQ=255) acGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCa > 2:371153/1‑149 (MQ=255) gCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGtt < 1:247858/103‑1 (MQ=255) gCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGtt > 2:247858/1‑102 (MQ=255) ccccAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCa < 2:245631/149‑1 (MQ=255) cccagtcccagtTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAg < 7:2935/149‑1 (MQ=255) ccagtcccagtTTTAATTCTTCGGGATTTCCCCTCTGTCGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCa < 6:322841/147‑1 (MQ=255) ccagtcccagtTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCCCCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTATTGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCa > 5:322841/1‑147 (MQ=255) ccagtcccagtTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAgg > 1:16279/1‑149 (MQ=255) gtcccagtTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCa > 5:320465/1‑149 (MQ=255) cccagtTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCAc < 6:204882/148‑1 (MQ=255) ccagtTGTAATTCATCGGGATTTCCCCTCAGACGATTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTc < 5:53936/125‑1 (MQ=255) ccagtTGTAATTCATCGGGATTTCCCCTCAGACGATTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTc > 6:53936/1‑125 (MQ=255) tCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGAt > 7:176792/1‑147 (MQ=255) gggATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAg > 6:277770/1‑148 (MQ=255) ccccTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGActtct > 3:199109/1‑148 (MQ=255) cccTCAGACGGTTGTTTCACGGTCACCTTCGAG‑CATCCGGTGGCGCAAGGCGCCCACGGATGAAAGGTTAGACAATAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACttcttc < 5:361445/149‑1 (MQ=255) cccTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACttcttc < 6:35488/149‑1 (MQ=255) cccTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGCTTAGACACTAATGAGTGGCCTGAAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACttcttc > 1:355388/1‑149 (MQ=255) ccTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGAtt > 7:230244/1‑99 (MQ=255) ccTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGAtt < 8:230244/99‑1 (MQ=255) ccTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTtcttct > 4:82076/1‑149 (MQ=255) cTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTtctc < 8:106033/149‑1 (MQ=255) tCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCg > 4:320587/1‑149 (MQ=255) tCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCg > 4:325829/1‑149 (MQ=255) aGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTc > 2:2443/1‑149 (MQ=255) ggTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGa < 4:86709/124‑1 (MQ=255) ggTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGa > 3:86709/1‑124 (MQ=255) tCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTg < 3:130244/148‑1 (MQ=255) cACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTgt < 3:320587/148‑1 (MQ=255) cACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTgt < 3:325829/148‑1 (MQ=255) gCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGaaa > 7:186237/1‑43 (MQ=255) gCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGaaa < 8:186237/43‑1 (MQ=255) cTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGtcggctc > 5:319284/1‑149 (MQ=255) ttCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGtcggctcg > 3:121432/1‑149 (MQ=255) cctttcATCCGTGGGCGCCTTGCGCCCCCGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTgtc > 4:140475/6‑138 (MQ=38) cctttcATCCGTGGGCGCCTTGCGCCCCCGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTgtc < 3:140475/133‑1 (MQ=38) cGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGc > 4:177199/1‑131 (MQ=255) cGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGc < 3:177199/131‑1 (MQ=255) ctttcATCCGTGGGCGCCTTGCGCCCCCGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAg < 4:202852/101‑1 (MQ=37) ctttcATCCGTGGGCGCCTTGCGCCCCCGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAg > 3:202852/5‑105 (MQ=37) aTCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGATCa < 5:277770/149‑1 (MQ=255) ccGTGGGCGCCTTGCGCCCCCGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGATCAGt > 6:214770/1‑149 (MQ=255) gggggCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGATCAGttt < 4:121432/149‑1 (MQ=255) | ATGGTCCAGCCCAGGCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAG‑CATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGATCAGTTT > NC_002947/1225327‑1225620 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |