| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,258,040 | G→T | 5.3% | intergenic (+16/‑46) | dcd → / → PP_1101 | deoxycytidine triphosphate deaminase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,258,040 | 0 | G | T | 5.3% | 242.7 / 3.4 | 75 | intergenic (+16/‑46) | dcd/PP_1101 | deoxycytidine triphosphate deaminase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (28/43); new base T (2/2); total (30/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.59e-01 | |||||||||||
GGCAAAGATCTACGCCAACGAAGGCGTGGCGCAGATGCTGTTCTTGCAGTCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGAAACTCCATCCCGCAATCAGTGCCAAGCTGGCAGGCCTGCAGCCCAATCACGTTGGGTTGTTG > NC_002947/1257892‑1258184 | ggCAAAGATCTACGCCAACGAAGGCGTGGCGCAGATGCTGTTCTT‑CAGTCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCgggg > 5:3994/1‑148 (MQ=255) cAAAGATCTACGCCAACGAAGGCGTGGCGCAGATGCTGTTCTTGCAGTCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGaa < 3:23639/149‑1 (MQ=255) cAAAGATCTACGCCAACGAAGGCGTGGCGCAGATGCTGTTCTTGCAGTCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGaa < 2:65609/149‑1 (MQ=255) aaaGATCTACGCCAACGAAGGCGTGGCGCAGATGCTGTTCTTGCAGTCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAAt > 8:37850/1‑149 (MQ=255) aaaGATCTACGCCAACGAAGGCGTGGCGCAGATGCTGTTCTTGCAGTCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAAt < 8:270321/149‑1 (MQ=255) aaaGATCTACGCCAACGAAGGCGTGGCGCAGATGCTGTTCTTGCAGTCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAAt > 8:121516/1‑149 (MQ=255) aaaGATCTACGCCAACGAAGGCGTGGCGCAGATGCTGTTCTTGCAGTCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAAt > 8:116889/1‑149 (MQ=255) gATCTACGCCAACGAAGGCGTGGCGCAGATGCTGTTCTTGCAGTCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTAc < 2:19223/149‑1 (MQ=255) cGCCAACGAAGGCGTGGCGCAGATGCTGTTCTTGCAGTCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGTAACTCCCCgcgc < 5:8260/149‑1 (MQ=255) cAACGAAGGCGTGGCGCAGATGCTGTTCTTGCAGTCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCtt > 2:263791/1‑149 (MQ=255) aaCGAAGGCGTGGCGCAGATGCTGTTCTTGCAGTCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCttt < 8:178969/149‑1 (MQ=255) acgacgGCGGGGCGCCGATGCTGGTCTTGCAGTCCGACGCAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTg < 8:147431/149‑1 (MQ=255) cGAAGGCGTGGCGCAGATGCTGTTCTTGCAGTCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTgg < 7:116889/149‑1 (MQ=255) aacgCGTGGCGCAGATGCTGGTCTTGCACCCCGACGACGAGTGCGAACTGTCGCACAAGCACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCa < 8:240220/146‑1 (MQ=255) aGGCGTGGCGCAGATGCTGTTCTTGCAGTCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCAc > 7:350618/1‑149 (MQ=255) aGGCGTGGCGCAGATGCTGTTCTTGCAGTCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACATGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCa > 7:172655/1‑148 (MQ=255) tGGCGCAGATGCTGTTCTTGCAGTCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCaa < 8:77519/149‑1 (MQ=255) tGGCGCAGATGCTGTTCTT‑CAGTCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAAc < 6:3994/149‑1 (MQ=255) gcAGATGCTGTTCTTGCAGTCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGaa < 7:121516/149‑1 (MQ=255) gcAGATGCTGTTCTTGCAGTCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGaa < 8:350618/149‑1 (MQ=255) tGCTGTTCTTGCAGTCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAc > 7:254118/1‑149 (MQ=255) tGTTCTTGCAGTCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCACCGAAGTAAC‑Gcc > 5:15581/1‑149 (MQ=255) tGTTCTTGCAGTCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑Gcc > 3:281129/1‑149 (MQ=255) ttCTTGCAGTCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑Gcc < 5:314066/147‑1 (MQ=255) ttCTTGCAGTCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑Gcc < 1:368858/147‑1 (MQ=255) cTTGCAGTCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGgt < 6:191804/148‑1 (MQ=255) ttGCAGTCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGgt < 6:327297/147‑1 (MQ=255) ttGCAGTCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGgt > 5:327297/1‑147 (MQ=255) gTCCGACGAAGAGTGCGAAGTGTATTACAAGGACCGTGGCTGCAAATACCAGGGACAACTCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCTGGGTATTACCCTCGACTTTGTCACTCCAACGAAGTAAC‑GCCGGTGTGCatg < 2:56346/149‑1 (MQ=255) tCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCatga < 4:155350/149‑1 (MQ=255) tCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCatga > 4:200550/1‑149 (MQ=255) cgacgaAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCatgatg > 5:372160/1‑149 (MQ=255) gacgaAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGAtgt < 1:100182/149‑1 (MQ=255) agTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCATGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCgg < 4:281129/149‑1 (MQ=255) gTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCgg < 4:270214/148‑1 (MQ=255) cGAAGTGTCGTACATGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATc < 3:366660/143‑1 (MQ=255) cGAAGTGTCGTACATGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATc > 4:366660/1‑143 (MQ=255) cGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCttt > 5:247651/1‑149 (MQ=255) aGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACACGCGCGGGGAATTACCCTCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCg > 4:243092/1‑148 (MQ=255) tCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAgg < 2:11129/149‑1 (MQ=255) cAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGagcag > 2:92898/1‑149 (MQ=255) aaGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGagcagc < 8:254118/149‑1 (MQ=255) aaGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGagcagc > 4:187194/1‑149 (MQ=255) aaGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGagcagc > 4:142477/1‑149 (MQ=255) gACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACTAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGagcag < 8:204492/145‑1 (MQ=255) gACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACGAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGagcag > 7:204492/1‑145 (MQ=255) gACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCaa < 4:131846/149‑1 (MQ=255) gACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCaa < 2:13444/149‑1 (MQ=255) ccGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAACTCCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAAt < 1:263791/149‑1 (MQ=255) tGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGaaa > 2:233577/1‑149 (MQ=255) tGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGaaa < 3:142477/149‑1 (MQ=255) cggcAAATACCAGGGCCAACGCGGCGTCACACTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCAGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGAAACTc > 8:69458/1‑149 (MQ=255) aaaTACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGAAACTCCATc < 3:200550/149‑1 (MQ=255) cAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGAAACTCCATCCCGCaa > 7:316782/1‑149 (MQ=255) aGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGAAACTCCATCCCGCAAt < 6:372160/149‑1 (MQ=255) gggCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTACATCGGCTTTCGTCAGGAGCAGCCAATGAAACTCCATCCCGCAAt > 4:339549/1‑148 (MQ=255) cAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGAAACTCCATCCCGCAATCAGTg > 3:316670/1‑149 (MQ=255) gcggcgTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGAAACTCCATCCCGCAATCAGTGCCaa < 7:37850/149‑1 (MQ=255) tCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGAtgt < 1:234231/88‑1 (MQ=255) tCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGAAACTCCATCCCGCAATCAGTGCAAAGCTGGc < 8:172655/149‑1 (MQ=255) tCACCCTGCCGAGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGAtgt > 2:234231/1‑88 (MQ=255) aCCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGAAACTCCATCCCGCAATCAGTGCCAAGCTGGc < 2:135295/147‑1 (MQ=255) aCCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGAAACTCCATCCCGCAATCAGTGCCAAGCTGGCaa > 1:135295/1‑148 (MQ=255) aCCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGAAACTCCATCCCGCAATCAGTGCCAAGCTGGCa < 8:316782/148‑1 (MQ=255) aCCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGAAACTCCATCCCGCAATCAGTGCCAAGCTGGCa < 1:92898/148‑1 (MQ=255) ccTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTACATCGGCTTTCGTCAGGAGCAGCCAATGAAACTCCATCCCGCAATCAGTGCCAAGCTGGCAGGc < 3:339549/149‑1 (MQ=255) gTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGAAACTCCATCCCGCAATCAGTGCCAAGCTGGCAGGCCTGCAGcc < 7:69458/149‑1 (MQ=255) tGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGAAACTCCATCCCGCAATCAGTGc < 4:663/123‑1 (MQ=255) tGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGAAACTCCATCCCGCAATCAGTGc > 3:663/1‑123 (MQ=255) cGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGAAACTCCATCCCGCAATCAGTGCCAAGCTGGCAGGCCTGCAGCCCAATCACGtt < 4:316670/149‑1 (MQ=255) aaaggcgcGGGTAATTCCCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGAAAATCCATCCCGCAATCAGTGCCAAGCTGGCAGGCCTGCAGCCCAATCACGTTgg > 3:39825/5‑149 (MQ=255) aCAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGAAACTCCATCCCGCAATCAGTGCCAAGCTGGCAGGCCTGCAGCCCAATCACGTTgg > 8:5000/1‑149 (MQ=255) aggcgcGGGTAATTCCCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGAAACTCCATCCCGCAATCAGTGCCAAGCTGGCAGGCCTGCAGCCCAATCACGtt < 5:266937/143‑1 (MQ=255) aggcgcGGGTAATTCCCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGAAACTCCATCCCGCAATCAGTGCCAAGCTGGCAGGCCTGCAGCCCAATCACGtt > 6:266937/3‑145 (MQ=255) gcgGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGAAACTCCATCCCGCAATCAGTGCCAAGCTGGCAGGCCTGCAGCCCAATCACGTTGGgttgtt < 3:243092/149‑1 (MQ=255) cgGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGAAACTCCATCCCGCAATCAGTGCCAAGCTGGCAGGCCTGCAGCCCAATCACGTTGGGttgttg < 7:5000/149‑1 (MQ=255) | GGCAAAGATCTACGCCAACGAAGGCGTGGCGCAGATGCTGTTCTTGCAGTCCGACGAAGAGTGCGAAGTGTCGTACAAGGACCGTGGCGGCAAATACCAGGGCCAACGCGGCGTCACCCTGCCGCGTACCTGAGCCGACAAGCGCGGGGAATTACCCGCGCCTTTGGCACTCCAACGAAGTAAC‑GCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGAAACTCCATCCCGCAATCAGTGCCAAGCTGGCAGGCCTGCAGCCCAATCACGTTGGGTTGTTG > NC_002947/1257892‑1258184 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |