| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,355,771 | T→G | 6.1% | intergenic (+38/‑354) | PP_1180 → / → PP_1181 | hypothetical protein/two‑component system response regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,355,771 | 0 | T | G | 6.1% | 254.1 / 4.5 | 79 | intergenic (+38/‑354) | PP_1180/PP_1181 | hypothetical protein/two‑component system response regulator |
| Reads supporting (aligned to +/- strand): ref base T (34/40); new base G (3/2); total (37/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGCCCGAACAACGCCCTGAAAGGGCTTGCCTCGGTCGCCTCCGCAGGAGCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAATGGTGGGTATTCGCTGTAGGCCTTGTGCCAAGTGGTTTGCAGTATTTTTCTG > NC_002947/1355623‑1355915 | tGCCCGAACAACGCCCTGAAAGGGCTTGCCTCGGTCGCCTCCGCAGGAGCGGTTTGGCTGCTGTAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGt < 5:334931/149‑1 (MQ=255) aacGCCCTGAAAGGGCTTGCCTCGGTCGCCTCCGCAGGAGCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGGTg > 8:250926/1‑149 (MQ=255) aacGCCCTGAAAGGGCTTGCCTCGGTCGCCTCCGCAGGAGCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTg > 6:116378/1‑149 (MQ=255) ccTGAAAGGGCTTGCCTCGGTCGCCTCCGCAGGAGCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATc > 3:70337/1‑149 (MQ=255) ccTGAAAGGGCTTGCCTCGGTCGCCTCCGCAGGAGCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCACTAGATATAGGGGTTCgt < 8:210074/142‑2 (MQ=255) ccTGAAAGGGCTTGCCTCGGTCGCCTCCGCAGGAGCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCACTAGATATAGGGGTTCgt > 7:210074/1‑141 (MQ=255) tGAAAGGGCTTGCCTCGGTCGCCTCCGCAGGAGCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCgg > 7:82531/1‑149 (MQ=255) aaaGGGCTTGCCTCGGTCGCCTCCGCAGGAGCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCgg < 4:40645/147‑1 (MQ=255) aGGGCTTGCCTCGGTCGCCTCCGCAGGAGCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGAt > 8:214069/1‑148 (MQ=255) gCTTGCCTCGGTCGCCTCCGCAGGAGCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACaa < 4:250465/149‑1 (MQ=255) cTTGCCTCGGTCGCCTCCGCAGGAGCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAg < 1:126353/149‑1 (MQ=255) gCCTCGGTCGCCTCCGCAGGAGCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACCTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGAt > 8:179476/1‑148 (MQ=255) gCCTCGGTCGCCTCCGCAGGAGCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACCTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGAt > 2:118080/1‑148 (MQ=255) ccTCGGTCGCCTCCGCAGGAGCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATaa > 2:91172/1‑149 (MQ=255) ggTCGCCTCCGCAGGAGCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCg < 6:253003/149‑1 (MQ=255) ggTCGCCTCCGCAGGAGCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCg < 5:174350/149‑1 (MQ=255) ggTCGCCTCCGCAGGAGCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACCTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATg < 7:179476/147‑1 (MQ=255) ggTCGCCTCCGCAGGAGCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACCTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATg < 1:118080/147‑1 (MQ=255) gTCGCCTCCGCAGGAGCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCgg > 3:345290/1‑149 (MQ=255) tCGCCTCCGCAGGAGCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTGCGCTGCGATCGGGATACAAGATAATGCGGt < 7:86728/149‑1 (MQ=255) cTCCGCAGGAGCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAAt < 3:366151/140‑1 (MQ=255) cTCCGCAGGAGCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAAt > 4:366151/1‑140 (MQ=255) cTCCGCAGGAGCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTg > 1:326936/1‑149 (MQ=255) cTCCGCAGGAGCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTCTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTg > 7:239782/1‑149 (MQ=255) tCCGCAGGAGCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTgg > 7:240840/1‑149 (MQ=255) cGCAGGAGCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTgg < 5:116378/147‑1 (MQ=255) gAGCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCttt < 8:82531/149‑1 (MQ=255) gCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTg > 4:147380/1‑148 (MQ=255) ggTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCaa < 2:326936/149‑1 (MQ=255) ggTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCaa < 8:239782/149‑1 (MQ=255) gctgctGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAg < 8:240840/149‑1 (MQ=255) ctgctgAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAgc < 3:147380/149‑1 (MQ=255) tgctgAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCa < 7:272861/140‑1 (MQ=255) tgctgAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCa > 8:272861/1‑140 (MQ=255) aaaTCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTgg < 4:119544/125‑1 (MQ=255) aaaTCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCtgt < 6:281506/149‑1 (MQ=255) aaaTCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCtgt < 4:289445/149‑1 (MQ=255) tCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGa > 5:367151/1‑149 (MQ=255) aaGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGtt < 6:367151/148‑1 (MQ=255) aCCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTAc > 8:241102/1‑149 (MQ=255) aCCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTAc < 7:214069/149‑1 (MQ=255) ccGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTtgt > 4:287543/1‑141 (MQ=255) ccGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTtgt < 3:287543/141‑1 (MQ=255) ccGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACtt > 4:60358/1‑149 (MQ=255) gAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTtgt < 7:241102/149‑1 (MQ=255) ataTCGCTTGATCTTGCGGGTTGTCTTTTGTGTGTGTTTTTTCACGAACCCCTATTTCTAGTGGTTCGCTGCGATCGGGATTCATGATAATGCGTTATTGGGGGCTTTGCAAGGCGAGCGGCTGTGGATAAGTTGTGTGTACTTTgtga < 1:112273/147‑1 (MQ=255) aaaTCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTg > 1:169829/1‑100 (MQ=255) aaaTCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTg < 2:169829/100‑1 (MQ=255) gATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAAtg < 5:309784/147‑1 (MQ=255) aTCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAAtggt < 7:250926/148‑1 (MQ=255) aTCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAAtggt < 4:345290/148‑1 (MQ=255) gCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAATGGTggg < 1:91172/146‑1 (MQ=255) cGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAATGGTGGGTAt < 4:263704/148‑1 (MQ=255) gggTTGACTTTTGTGTGTGATTTTGCACGAACCCCTTAATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTTTTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAATGGTGGGTAtt < 7:233175/148‑1 (MQ=255) gTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGAt < 4:299255/56‑1 (MQ=255) gTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGAt > 3:299255/1‑56 (MQ=255) ttGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAAtg > 8:155836/1‑136 (MQ=255) ttGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAAtg < 7:155836/136‑1 (MQ=255) ttttGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAATGGTGGGTATTCGCTGTAgg > 6:195011/1‑149 (MQ=255) ttttGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAATGGTGGGTATTCGCTGTAgg > 3:169252/1‑149 (MQ=255) ttttGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAATGGTGGGTATTCGCTGTAgg > 6:331071/1‑149 (MQ=255) tgtgATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGc > 5:209010/1‑83 (MQ=255) tgtgATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGc < 6:209010/83‑1 (MQ=255) tgtgATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAAtggt > 4:146784/1‑126 (MQ=255) tgtgATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAAtggt < 3:146784/126‑1 (MQ=255) tgATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTgg < 6:211572/93‑1 (MQ=255) ttttGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAATGGTGGGTATTCGCTGTAGGCCTTGTGCCAAg > 5:66500/1‑149 (MQ=255) cagcGAACCACTAGATATAGGGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAATGGTGGGTATTCGCTGTAGGCCTTGTGCCAAGTGGt > 7:22000/4‑149 (MQ=255) aaCCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAATGGTGGGTATTCGCTGTAGGCCTTGTGCCAAGTGGTTTGCa < 7:14527/149‑1 (MQ=255) ccccTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAATGGTGGGTATTCGCTGTAGGCCTtgt < 6:181259/132‑1 (MQ=255) ccccTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAATGGTGGGTATTCGCTGTAGGCCTtgt > 5:181259/1‑132 (MQ=255) cccTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAATGGTGGGTATTCGCTGTAGGCCTTGTGCCAAGTGGTTTGCAGTa > 6:50291/1‑149 (MQ=255) cccTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAATGGTGGGTATTCGCTGTAGGCCTTGTGCCAAGTGGTTTGCAGTa > 5:162408/1‑149 (MQ=255) cTAGATATAGGGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAATGGTGGGTATTCGCTGTAGGCCTTGTGCCAAGTGGTTTGCAGTAtt > 3:184767/1‑149 (MQ=255) tatAGGGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAATGGTGGGTATTCGCTGTAGGCCTTGTGCCAAGTGGTTTGCAGTATTTTTCt < 2:285767/147‑1 (MQ=255) tCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAATGGTGGGTATTCGCTGt > 6:195554/1‑115 (MQ=255) tCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAATGGTGGGTATTCGCTGt < 5:195554/115‑1 (MQ=255) tAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAATGGTGGGTATTCGCTGTAGGCCTTGTGCCAAGTGGTTTGCAGTATTTTTCTg > 5:96080/1‑148 (MQ=255) gTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAATGGTGGGTATTCGCTGTAGGCCTTGTGCCAAGTGGTTTGCAGTATTTTTCTg < 6:333800/146‑1 (MQ=255) gTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAATGGTGGGTATTCGCTGTAGGCCTTGTGCCAAGTGGTTTGCAGTATTTTTCTg > 5:333800/1‑146 (MQ=255) | TGCCCGAACAACGCCCTGAAAGGGCTTGCCTCGGTCGCCTCCGCAGGAGCGGTTTGGCTGCTGAAATCACCTGAAGTTCCACCCGGAAAATCGCTTGATCTTGCGGGTTGACTTTTGTGTGTGATTTTGCACGAACCCCTATATCTAGTGGTTCGCTGCGATCGGGATACAAGATAATGCGGTATTGGGGGCTTTGCAAGGCGAGCGCCTGTGGATAAGTTGTGTGTACTTTGTGAGTGAATGGTGGGTATTCGCTGTAGGCCTTGTGCCAAGTGGTTTGCAGTATTTTTCTG > NC_002947/1355623‑1355915 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |