| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,356,634 | C→T | 6.8% | N170N (AAC→AAT) ‡ | PP_1181 → | two‑component system response regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,356,634 | 0 | C | T | 6.8% | 217.7 / 4.0 | 73 | N170N (AAC→AAT) ‡ | PP_1181 | two‑component system response regulator |
| Reads supporting (aligned to +/- strand): ref base C (33/35); new base T (2/3); total (35/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.27e-01 | |||||||||||
CGCAGCGAAACCGTGGACAGCAAGCGCCAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCGCTTCAGCCGCGGTTGATCAAGACC > NC_002947/1356488‑1356781 | cgcAGCGAAACCGTGGACAGCAAGCGCCAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGc > 2:86336/1‑149 (MQ=255) gcAGCGAAACCGTGGACAGCAAGCGCCAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCt < 1:116713/149‑1 (MQ=255) aaaCCGTGGACAGCAAGCGCCAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCGTTGCTGG‑ccaa < 4:215084/149‑3 (MQ=255) ccGTGGACAGCAAGCGCCAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTg < 4:160573/149‑1 (MQ=255) tGGACAGCAAGCGCCAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCt > 8:109831/1‑148 (MQ=255) gACAGCAAGCGCCAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGa < 8:349560/148‑1 (MQ=255) gACAGCAAGCGCCAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGAc < 7:260274/149‑1 (MQ=255) gACAGCAAGCGCCAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGAc < 1:322421/149‑1 (MQ=255) gcgcCAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGaa > 5:208595/1‑148 (MQ=255) cAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGCCCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGaa > 8:169823/1‑144 (MQ=255) cAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGaa > 2:129752/1‑144 (MQ=255) cAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGa > 2:134980/1‑148 (MQ=255) cAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGAt < 1:246293/149‑1 (MQ=255) cAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCCCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGa > 7:155363/1‑148 (MQ=255) gCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTTAACAGATCTTCAcc < 1:60923/147‑1 (MQ=255) tGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTgcgtg < 8:155363/149‑1 (MQ=255) cgcTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTgcgtgg < 6:208595/148‑1 (MQ=255) cGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTgcgtggcgtg < 1:129752/147‑1 (MQ=255) cGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTgcgtggcgtg < 1:134980/147‑1 (MQ=255) cGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGcgtggcgtgg < 7:45800/148‑1 (MQ=255) gTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGc > 2:317941/1‑149 (MQ=255) cAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCt < 2:198636/91‑1 (MQ=255) cAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCt > 1:198636/1‑91 (MQ=255) cAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTacgacg > 5:52803/1‑149 (MQ=255) gCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGAcc > 1:346629/1‑149 (MQ=255) cGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCg < 7:109831/149‑1 (MQ=255) aGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTcc < 2:20043/149‑1 (MQ=255) ggCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCa > 6:19474/1‑149 (MQ=255) gcgcgcCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGTCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTgcgtggcgt < 1:76293/123‑1 (MQ=255) gcgcgcCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCTCGTGATGAACCGTGAACAGAACTTCAACGCACTGCGTGGCGTGGGCTACGACGGCCAGTACCGCTCCa > 4:29875/1‑148 (MQ=255) gcgcgcCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAAc > 6:32532/1‑97 (MQ=255) gcgcgcCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAAc < 5:32532/97‑1 (MQ=255) gcgcgcCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTgcgtggcgt > 2:76293/1‑122 (MQ=255) gggCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCCCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGACTACGACGGCCAGGACCGCTCCATCGATATcc > 7:211434/1‑149 (MQ=255) gAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCAt > 8:60996/1‑149 (MQ=255) cAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCATGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCAtctc < 1:86336/149‑1 (MQ=255) cAGTTGATCGAGCTAACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCAtctc > 7:345201/1‑149 (MQ=255) gTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCg > 4:74738/1‑148 (MQ=255) aTCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAAt > 1:5640/1‑149 (MQ=255) gCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGcc > 7:257234/1‑149 (MQ=255) gCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGcc > 3:244378/1‑149 (MQ=255) cTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGccc < 7:60996/149‑1 (MQ=255) gcgcCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATc < 2:268281/149‑1 (MQ=255) cgcCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGGCCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCg < 2:278725/149‑1 (MQ=255) gcCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCgg > 5:351886/1‑149 (MQ=255) cGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGaaaggca > 3:50900/1‑143 (MQ=255) cGAATTCGACCTGCGCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCgg < 4:50900/147‑1 (MQ=255) gAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGa > 6:79533/1‑149 (MQ=255) gACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGAccc > 3:131371/1‑149 (MQ=255) gACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGAccc > 3:103973/1‑149 (MQ=255) gACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGAccc > 1:155489/1‑149 (MQ=255) aCCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCg < 6:52803/149‑1 (MQ=255) aCCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCg > 4:9748/1‑149 (MQ=255) cTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCGCt > 7:247945/1‑149 (MQ=255) ctctGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCGCTTCa < 1:317941/149‑1 (MQ=255) tGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCGCTTCAGcc > 5:325646/1‑149 (MQ=255) gCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCGCTTCAGCcgc > 7:224783/1‑149 (MQ=255) gCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCGCTTCAGCcgc < 4:103973/149‑1 (MQ=255) acgcggCCAGCGTTGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCg > 7:104226/5‑100 (MQ=255) acgcggCCAGCGTTGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCg < 8:104226/96‑1 (MQ=255) gTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCGCTTCAGCCGCGGt > 1:41292/1‑149 (MQ=255) gcggCCAGCGTTGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTac > 6:268116/3‑69 (MQ=38) gcggCCAGCGTTGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTac < 5:268116/67‑1 (MQ=255) gCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCGCTTCAGCCGCGGTTGa < 5:79533/148‑1 (MQ=255) gCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCGCTTCAGCCGCGGTTGa < 1:175896/148‑1 (MQ=255) gCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCGCTTCAGCCGCGGTTGa < 2:5640/148‑1 (MQ=255) gCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCGCTTCAGCCGCGGTTGAt < 7:169823/149‑1 (MQ=255) gCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCGCTTCAGCCGCGGTTGAt < 8:257234/149‑1 (MQ=255) ccAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCGCTTCAGCCGCGGTTGATc < 8:345201/149‑1 (MQ=255) aGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCGCTTCAGCCGCGGTTGATCaa < 8:224783/149‑1 (MQ=255) cAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCGCTTCAGCCGCGGTTGATCAAGa < 3:9748/149‑1 (MQ=255) cAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCGCTTCAGCCGCGGTTGATCAAGa < 3:74738/149‑1 (MQ=255) aCGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCGCTTCAGCCGCGGTTGATCAAGAcc < 2:155489/149‑1 (MQ=255) | CGCAGCGAAACCGTGGACAGCAAGCGCCAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGG‑CCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCGCTTCAGCCGCGGTTGATCAAGACC > NC_002947/1356488‑1356781 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |