Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,429,515 G→T 8.2% intergenic (+32/‑448) mqo‑II → / → PP_1252 malate:quinone oxidoreductase/group II intron‑encoding maturase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,429,5150GT 8.2% 213.1 / 4.1 67intergenic (+32/‑448)mqo‑II/PP_1252malate:quinone oxidoreductase/group II intron‑encoding maturase
Reads supporting (aligned to +/- strand):  ref base G (28/33);  new base T (4/2);  total (32/35)
Fisher's exact test for biased strand distribution p-value = 4.14e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CTGAAGTGCTGCAACTGGGTAAACCGCCGGTGATCGACGCCAGCGTTGAATTCGGTGGTGCGGCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGG  >  NC_002947/1429374‑1429658
                                                                                                                                             |                                                                                                                                               
cTGAAGTGCTGCAACTGGGTAAACCGCCGGTGATCGACGCCAGCGTTGAATTCGGTGGTGCGGCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTc                                                                                                                                          >  5:159175/1‑149 (MQ=255)
 tGAAGTGCTGCAACTGGGTAAACCGCCGGTGATCGACGCCAGCGTTGAATTCGGTGGTGCGGCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCg                                                                                                                                         >  7:294155/1‑149 (MQ=255)
    aGTGCTGCTACTGGGTAAACCGCCGGTGATCGACGCCATCGTTGAATTCGGTGGTGCGGCAAGCAAGCCGGTCGAGAGCTAGCCTGAGAACGACATGGCGCTGTAATCGTCCATTGTTGTGATAGAAAGCCACGGGGGAGACCTCGTg                                                                                                                                       <  3:228639/148‑1 (MQ=255)
        ctgcAACTGGGTAAACCGCCGGTGATCGACGCCAGCGTTGAATTCTGTTGTGCGGCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCAGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCtt                                                                                                                                   <  6:192999/148‑1 (MQ=255)
         tgcAACTGGGTAAACCGCCGGTGATCGACGCCAGCGTTGAATTCGGTGGTGCGGCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCtttt                                                                                                                                 >  3:136850/1‑149 (MQ=255)
           cAACTGGGTAAACCGCCGGTGATCGACGCCAGCGTTGAATTCGGTGGTGCGGCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCtttttt                                                                                                                               <  3:220349/149‑1 (MQ=255)
           cAACTGGGTAAACCGCCGGTGATCGACGCCAGCGTTGAATTCGGTGGTGCGGCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCtttttt                                                                                                                               >  5:308586/1‑149 (MQ=255)
           cAACTGGGTAAACCGCCGGTGATCGACGCCAGCGTTGAATTCGGTGGTGCGGCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCtttttt                                                                                                                               <  7:230256/149‑1 (MQ=255)
           cAACTGGGTAAACCGCCGGTGATCGACGCCAGCGTTGAATTCGGTGGTGCGGCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCttttt                                                                                                                                <  1:372102/148‑1 (MQ=255)
             aCTGGGTAAACCGCCGGTGATCGACGCCAGCGTTGAATTCGGTGGTGCGGCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTtgt                                                                                                                             <  4:185116/149‑1 (MQ=255)
               tGGGTAAACCGCCGGTGATCGACGCCAGCGTTGAATTCGGTGGTGCGGCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACAAGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTtgtgt                                                                                                                           >  2:296250/1‑149 (MQ=255)
                 ggTAAACCGCCGGTGATCGACGCCAGCGTTGAATTCGGTGGTGCGGCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTgc                                                                                                                         >  7:126557/1‑149 (MQ=255)
                 ggTAAACCGCCGGTGATCGACGCCAGCGTTGAATTCGGTGGTGCGGCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGAGGTCTCCCCCGTGGCtttctttcaca                                                                                                                          <  7:153194/148‑6 (MQ=38)
                      aCCGCCGGTGATCGACGCCAGCGTTGAATTCGGTGGTGCGGCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAg                                                                                                                    >  6:217701/1‑149 (MQ=255)
                       ccgccgGTGATCGACGCCAGCGTTGAATTCGGTGGTGCGGCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGCGGGAGACCTCGTGGCTTATTTGTGTGCTCCAgg                                                                                                                   >  6:376609/1‑149 (MQ=255)
                           ctttGATCGTCGCCTGCGTTGAATTCGGTGGTGAGGCAAGCAAGTCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATg                                                                                                               <  4:31242/146‑1 (MQ=255)
                            ggTGATCGACGCCAGCGTTGAATTCGGTGGTGCGGCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATgg                                                                                                              <  4:231376/149‑1 (MQ=255)
                             gTGATCGACGCCAGCGTTGAATTCGGTGGTGCGGCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGgc                                                                                                             >  4:140399/1‑149 (MQ=255)
                                aTCGACGCCAGCGTTGAATTCGGTGGTGCGGCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGgcgc                                                                                                           <  8:126557/148‑1 (MQ=255)
                                 tCGACGCCAGCGTTGAATTCGGTGGTGCGGCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGt                                                                                                         <  3:300186/149‑1 (MQ=255)
                                   gACGCCAGCGTTGAATTCGGTGGTGCGGCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGtt                                                                                                        <  4:136850/148‑1 (MQ=255)
                                        cAGCGTTGAATTCGGTGGTGCGGCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGt                                                                                                  <  8:251062/149‑1 (MQ=255)
                                        cAGCGTTGAATTCGGTGGTGCCGCAAGCAAGCCGGTCGAGAGCACGCCTGAGAACGACATGGCGCTGTACTCGGCCATTCTTGTGAAAGAAAGCCAAGGGGTAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGcgcg                                                                                                   >  5:110981/1‑148 (MQ=39)
                                           cGTTGAATTCGGTGGTGCGGCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATg                                                                                               <  5:217701/149‑1 (MQ=255)
                                            gTTGAATTCGGTGGTGCGGCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGt                                                                                                                                        <  3:219779/107‑1 (MQ=255)
                                            gTTGAATTCGGTGGTGCGGCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGt                                                                                                                                        >  4:219779/1‑107 (MQ=255)
                                                  ttCGGTGGTGCGGCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAAcc                                                                                        >  2:323828/1‑149 (MQ=255)
                                                      gtggtgCGGCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCt                                                                                    <  6:159175/149‑1 (MQ=255)
                                                            cGGCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTtg                                                                              >  3:310/1‑149 (MQ=255)
                                                             ggCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTtgt                                                                             <  2:40954/149‑1 (MQ=255)
                                                              gcaagcaaGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTtgtg                                                                            >  1:368764/1‑149 (MQ=255)
                                                                aagcaagcCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCttttt                                                                                                                                >  1:302957/1‑95 (MQ=255)
                                                                aagcaagcCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCttttt                                                                                                                                <  2:302957/95‑1 (MQ=255)
                                                                aagcaagcCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTgtggt                                                                          >  2:295259/1‑149 (MQ=255)
                                                                      gcCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTgg                                                                                 <  6:45846/136‑1 (MQ=255)
                                                                      gcCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTgg                                                                                 >  5:45846/1‑136 (MQ=255)
                                                                        ctgTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGt                                                                  <  5:376609/147‑1 (MQ=255)
                                                                          gTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTgg                                                                <  2:28965/149‑1 (MQ=255)
                                                                           tCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTggg                                                               <  1:295259/149‑1 (MQ=255)
                                                                             gagaGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCAAAGTGGGt                                                              >  2:349030/1‑148 (MQ=255)
                                                                                  cAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTg                                                        >  7:116994/1‑149 (MQ=255)
                                                                                   aaGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTgg                                                       <  2:368764/149‑1 (MQ=255)
                                                                                   aaGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGACAGGAATGGCGAGTTGCGCATTAGCGAAACCCGATTGGTTGTGGTGCCCAAGTGTGTGACttcg                                                       >  8:159461/1‑147 (MQ=255)
                                                                                           gaACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGaaa                                               <  3:140399/149‑1 (MQ=255)
                                                                                              cGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTc                                            >  4:194786/1‑149 (MQ=255)
                                                                                                 cATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCctc                                         <  7:284043/149‑1 (MQ=255)
                                                                                                 cATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCctc                                         <  4:106652/149‑1 (MQ=255)
                                                                                                  aTGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCctct                                        <  8:294155/149‑1 (MQ=255)
                                                                                                   tGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTa                                       <  1:349030/149‑1 (MQ=255)
                                                                                                                 gCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTTGGTGACTTGGAGGTGAAATTCCTCTACACACCCGGCAAgg                         >  1:67657/1‑149 (MQ=255)
                                                                                                                 gCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTTGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAgg                         >  1:73023/1‑149 (MQ=255)
                                                                                                                 gCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAgg                         <  6:308586/149‑1 (MQ=255)
                                                                                                                          gtgAAAGAAAGCCACGGGGTAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAttgt                 <  4:310/148‑1 (MQ=255)
                                                                                                                           tgAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTa               <  1:89052/149‑1 (MQ=255)
                                                                                                                             aaagaaagCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAgg                         <  7:75390/137‑1 (MQ=255)
                                                                                                                             aaagaaagCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAgg                         >  8:75390/1‑137 (MQ=255)
                                                                                                                             aaagaaagCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGc             >  4:177355/1‑149 (MQ=255)
                                                                                                                              aagaaagCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGaaa                                               >  2:123205/1‑114 (MQ=255)
                                                                                                                              aaaaaagCCACGAGGTCTCCCCCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGcc            >  4:43064/4‑149 (MQ=11)
                                                                                                                                aaaagCCACGAGGTCTCCCCCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCg           >  1:69339/2‑148 (MQ=11)
                                                                                                                                aaaagCCACGAGGTCTCCCCCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCg           >  3:173433/2‑148 (MQ=11)
                                                                                                                                 aaagGCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGGCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGa         <  6:110981/149‑1 (MQ=255)
                                                                                                                                 aaagCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCTCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGa         <  4:360079/149‑1 (MQ=255)
                                                                                                                                 aaagCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCg           >  7:289198/1‑147 (MQ=255)
                                                                                                                                    gCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAgg       >  3:232823/1‑148 (MQ=255)
                                                                                                                                       aCGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAg   >  6:365823/1‑149 (MQ=255)
                                                                                                                                        cGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAgg  <  4:232823/149‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                               
CTGAAGTGCTGCAACTGGGTAAACCGCCGGTGATCGACGCCAGCGTTGAATTCGGTGGTGCGGCAAGCAAGCCGGTCGAGAGCAAGCCTGAGAACGACATGGCGCTGTAATCGGCCATTGTTGTGAAAGAAAGCCACGGGGGAGACCTCGTGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGG  >  NC_002947/1429374‑1429658

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑