| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,594,067 | C→G | 13.7% | intergenic (‑265/+36) | PP_1399 ← / ← kgtP | hypothetical protein/alpha‑ketoglutarate permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,594,067 | 0 | C | G | 13.7% | 196.7 / 21.6 | 73 | intergenic (‑265/+36) | PP_1399/kgtP | hypothetical protein/alpha‑ketoglutarate permease |
| Reads supporting (aligned to +/- strand): ref base C (30/33); new base G (7/3); total (37/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.37e-01 | |||||||||||
TGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGTGACGTACCAGTAGAAGCCGCTCTC > NC_002947/1593929‑1594207 | tGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGgcgc < 8:321013/149‑1 (MQ=255) tCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCACCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGcc‑‑c > 2:42464/1‑149 (MQ=255) gTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGcc‑‑cc < 7:31007/148‑1 (MQ=255) ttCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCttt > 5:188293/1‑147 (MQ=255) ttCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTa > 7:159985/1‑149 (MQ=255) ttCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTa > 7:53658/1‑149 (MQ=255) aGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTa > 8:226930/1‑149 (MQ=255) aGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCCCCATTGCATGGAgcgc < 6:16229/138‑1 (MQ=255) aGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCCCCATTGCATGGAgcgc > 5:16229/1‑138 (MQ=255) ggCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTAc > 6:251775/1‑149 (MQ=255) gCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACt < 5:206344/149‑1 (MQ=255) gCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTgcc < 8:159985/149‑1 (MQ=255) gCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTgc > 2:73971/1‑148 (MQ=255) aaGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGATTTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTgccag > 3:335385/1‑149 (MQ=255) ctggctTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTgccaggcca < 5:251775/149‑1 (MQ=255) tggctTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTgccaggccag > 2:291956/1‑149 (MQ=255) ggctTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGc < 3:332785/149‑1 (MQ=255) ctTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGt > 5:206049/1‑149 (MQ=255) ggAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAATAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTAc < 6:247535/148‑1 (MQ=255) agaacGTTGGCGCCCGCGCGAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACt > 7:210316/5‑149 (MQ=255) gAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACt > 7:243556/1‑148 (MQ=255) aGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCa < 5:200381/149‑1 (MQ=255) aGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCa < 1:42464/149‑1 (MQ=255) gTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTg < 1:73971/149‑1 (MQ=255) ttCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTgg < 8:53658/149‑1 (MQ=255) ttCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTgg > 8:152285/1‑149 (MQ=255) ttCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTgg > 8:157274/1‑149 (MQ=255) ccAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGt < 7:157274/149‑1 (MQ=255) ccAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGt < 7:152285/149‑1 (MQ=255) cAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCa > 6:43908/1‑132 (MQ=255) cAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCa < 5:43908/132‑1 (MQ=255) cAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTg > 7:344609/1‑135 (MQ=255) cAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTg < 8:344609/135‑1 (MQ=255) cAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGtg > 2:49019/1‑149 (MQ=255) aaCGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCt > 2:60735/1‑103 (MQ=255) aaCGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCt < 1:60735/103‑1 (MQ=255) cGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGtgctg < 7:226930/149‑1 (MQ=255) gccagccaTTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGgt > 6:294583/1‑149 (MQ=255) ccagccaTTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGgtg < 4:335385/149‑1 (MQ=255) ccagccaTTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGgt < 8:249542/148‑1 (MQ=255) ccagccaTTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGgt < 5:294583/148‑1 (MQ=255) ccaTTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCTCCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTc < 1:291956/149‑1 (MQ=255) cAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATg < 6:206049/148‑1 (MQ=255) gATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGtg < 8:167101/123‑1 (MQ=255) gATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGtg > 7:167101/1‑123 (MQ=255) tAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTa > 3:140078/1‑148 (MQ=255) gTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAAc > 3:264308/1‑147 (MQ=255) gAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACcagca < 8:243556/149‑1 (MQ=255) aTAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTg < 4:315383/115‑1 (MQ=255) cGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGa < 6:188293/149‑1 (MQ=255) cGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGa > 7:13996/1‑149 (MQ=255) ttAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATa < 3:310983/149‑1 (MQ=255) aagGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAg > 1:114520/1‑135 (MQ=255) aagGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAg < 2:114520/135‑1 (MQ=255) ggAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCgg < 4:140078/149‑1 (MQ=255) aaaaGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGt < 4:109668/148‑1 (MQ=255) cctctCTGAATCGAACAGGGCCGCTCCATGCAAGGGGGCGCC‑‑CCTTTTAGTACTGCCACGCCAGCGCTACTCCGACGCAATCCGCGAGTGCCGCTTGGTGTCTTTCCTGGTCGCGTAAACCAGCAGCGAGCAGGCGACACAGGCGGTGa < 8:318957/145‑1 (MQ=255) aaGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGTGAc < 1:49019/149‑1 (MQ=255) tGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGTGa > 7:318957/1‑143 (MQ=255) tGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGTGACGTAc > 6:325012/1‑148 (MQ=255) aaTAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCGGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGTGACGTGCCAg > 1:7218/1‑149 (MQ=255) aaTAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGTGACGTAc < 5:325012/146‑1 (MQ=255) ctaaaaGGGGCGCCCCATTGCATGGAGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGTGACGTAc < 6:180545/141‑1 (MQ=39) ctaaaaGGGGCGCCCCATTGCATGGAGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGTGACGTAc > 5:180545/3‑143 (MQ=39) aaaaGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGTGACGTACCAGTAg > 2:201115/1‑147 (MQ=255) aaaGGGGCGCCCCATTGCATGGAGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGTGACGTACCAGTAGAAg > 4:171885/1‑149 (MQ=255) aGGGGCGCCCCATTGCATGGAGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGTGACGTACCAGTAGAAGcc > 4:24378/1‑149 (MQ=255) ggggCGCCCCATTGCATGGAGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGTGACGTACCAGTAGAAGCCg < 3:24378/149‑1 (MQ=255) ggCGCCCCATTGCATGGAGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGTGACGTACCAGTAGAAGCCGct > 7:325065/1‑149 (MQ=255) ggCGCCCCATTGCATGGAGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGTGACGTACCAGTAGAAGCCGct > 3:42649/1‑149 (MQ=255) ggCGCCCCATTGCATGGAGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGTGACGTACCAGTAGAAGCCGct > 5:18034/1‑149 (MQ=255) gcgcTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCATCGAGCAGGCGATACAGGCGGTGACGTACCAGTAGAAGCCGctc > 7:142030/1‑149 (MQ=255) cTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGTCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGTGACGTACCAGTAGAAGCCGCtctc > 4:361339/1‑148 (MQ=255) | TGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCC‑‑CCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGTGACGTACCAGTAGAAGCCGCTCTC > NC_002947/1593929‑1594207 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |