| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,886,588 | A→G | 7.2% | I419V (ATC→GTC) | rmuC → | DNA recombination limiting inversions protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,886,588 | 0 | A | G | 7.2% | 199.5 / 4.7 | 69 | I419V (ATC→GTC) | rmuC | DNA recombination limiting inversions protein |
| Reads supporting (aligned to +/- strand): ref base A (30/34); new base G (3/2); total (33/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.65e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.17e-01 | |||||||||||
CAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTT > NC_002947/1886447‑1886736 | cAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGa < 7:205129/149‑1 (MQ=255) aGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGAc < 4:143171/149‑1 (MQ=255) tCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCt < 4:187370/148‑1 (MQ=255) tCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑g > 7:224507/1‑149 (MQ=255) cGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑g > 8:220705/1‑148 (MQ=255) gTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑gg < 4:93263/148‑1 (MQ=255) gTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGa > 6:65226/1‑149 (MQ=255) gTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGa < 2:110445/149‑1 (MQ=255) tGATTGTCAGCCCTACCACGTTGCTGGCCACCTTTCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGAc > 6:148878/1‑149 (MQ=255) tCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACt < 6:229355/148‑1 (MQ=255) tCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTg > 2:60666/1‑149 (MQ=255) aGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTggg < 8:224507/149‑1 (MQ=255) aGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTggg > 6:193022/1‑149 (MQ=255) aGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTgg < 5:174845/148‑1 (MQ=255) gCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGc > 4:760/1‑149 (MQ=255) ccTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAg > 2:72975/1‑149 (MQ=255) cACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATc < 1:56573/121‑1 (MQ=255) cACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATc > 2:56573/1‑121 (MQ=255) aCGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCtt < 4:83722/149‑1 (MQ=255) gTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGc > 3:150679/1‑145 (MQ=255) gTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGc < 4:150679/145‑1 (MQ=255) gTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTgc < 2:280323/149‑1 (MQ=255) tGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGcagcag > 8:324014/1‑149 (MQ=255) tGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGcagcag > 2:278960/1‑149 (MQ=255) ccACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTg < 5:173798/149‑1 (MQ=255) ccACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTg < 1:2244/149‑1 (MQ=255) ttGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCtt < 2:309209/134‑1 (MQ=255) ttGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCtt > 1:309209/1‑134 (MQ=255) ggTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCtt < 4:101380/149‑1 (MQ=255) ggTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCt > 4:340260/1‑148 (MQ=255) ttATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTAt < 7:324014/149‑1 (MQ=255) aTCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCa < 1:137514/98‑1 (MQ=255) aTCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCa > 2:137514/1‑98 (MQ=255) aCAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCa < 5:148878/149‑1 (MQ=255) cTGTGGAAGCAGGAGCGTCAAGGGCATAACGCCCGCGAAATTGCCGCTCGGGCCGGCTGGCTCTACGACAATTTCGTGCTGTTCATCCAGGACCTGGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAgcgc < 1:278960/149‑1 (MQ=255) tCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAg < 6:209813/149‑1 (MQ=255) aaGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAgg < 1:72975/148‑1 (MQ=255) gCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTg < 7:220705/149‑1 (MQ=255) gAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGc > 5:330912/1‑148 (MQ=255) cgcgAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCTGCa < 4:65448/111‑1 (MQ=255) cgcgAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCa > 3:65448/1‑111 (MQ=255) gcgAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGt > 5:330295/1‑148 (MQ=255) cgAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTa < 6:348016/149‑1 (MQ=255) cgAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTa < 4:170946/149‑1 (MQ=255) aTTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTAGTGCTGTTCATCCAGGACCT‑GGACGGACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCg > 7:311930/1‑149 (MQ=255) ccGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGc > 7:148864/1‑149 (MQ=255) ccGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGc < 5:65226/149‑1 (MQ=255) gAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGa < 3:760/149‑1 (MQ=255) ccGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCt > 6:193132/1‑148 (MQ=255) ctggctCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGagcag < 5:299989/142‑1 (MQ=255) ctggctCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGagcag > 6:299989/1‑142 (MQ=255) tctACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGctgctg > 3:133753/1‑149 (MQ=255) gACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTgg < 4:63583/145‑1 (MQ=255) gACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGgcgc > 3:99292/1‑149 (MQ=255) gACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGgcgc < 5:193022/149‑1 (MQ=255) gACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTCGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTgg > 3:63583/1‑145 (MQ=255) ttCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGc < 2:151198/149‑1 (MQ=255) ttCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGc < 5:193132/149‑1 (MQ=255) ttCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGAAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGc > 3:282610/1‑149 (MQ=255) ttCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGCCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGc > 1:151198/1‑149 (MQ=255) gCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGc > 1:139831/1‑148 (MQ=255) ccagTTCGTCCAGGTCCT‑GGATGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTg > 2:59330/4‑103 (MQ=39) ccagTTCGTCCAGGTCCT‑GGATGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTg < 1:59330/100‑1 (MQ=39) ccagTTCGTCCAGGTCCT‑GGATGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTg < 1:53867/100‑1 (MQ=39) ccagTTCGTCCAGGTCCT‑GGATGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTg > 2:53867/4‑103 (MQ=39) tGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGc > 1:8378/1‑146 (MQ=255) gTTCGTCCAGGTCCT‑GGATGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCaa > 5:122059/1‑147 (MQ=255) gTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGGAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCaa > 7:44228/1‑147 (MQ=255) cATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGc < 6:330295/148‑1 (MQ=255) aTCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGc < 3:225613/141‑1 (MQ=255) aTCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGc > 4:225613/1‑141 (MQ=255) aTCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCtt < 4:99292/149‑1 (MQ=255) | CAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCCGGCTGGCTCTACGACAAGTTCGTGCTGTTCATCCAGGACCT‑GGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTT > NC_002947/1886447‑1886736 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |