| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,340,703 | A→C | 5.4% | intergenic (+37/‑78) | dctA‑II → / → yraO | C4‑dicarboxylate transport protein/transporter YraO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,340,703 | 0 | A | C | 5.4% | 328.9 / 6.2 | 108 | intergenic (+37/‑78) | dctA‑II/yraO | C4‑dicarboxylate transport protein/transporter YraO |
| Reads supporting (aligned to +/- strand): ref base A (51/50); new base C (4/2); total (55/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.11e-01 | |||||||||||
Only 100 of 114 total aligned reads displayed.
GAAAACGCCTGTGACCGCCAGACGCTGCACAGCCGGCTGAACGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCACCTACCTGATCATGAGTAAACGCCTGTCACC > NC_002947/2340556‑2340851 | gAAAAGGCCTGTGAACGCCAGACGCTGCAGAGCCGTCTGAACTGCGAGCCTGTGGTCACTCCCGTCGCTGAAACAGCCTACTGTGTCGCCGAACCACCCCGCCACGGCTGAGCCCCGACACCCTCATGCTTTTTGCAGGCCCCCACCAg < 1:289791/149‑1 (MQ=255)gAAAACGCCTGTGACCGCCAGACGCTGCACAGCCGGCTGAACGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAg > 2:76662/1‑149 (MQ=255)gAAAACGCCTGTGACCGCCAGACGCTGCACAGCCGGCTGAACGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAg > 1:250746/1‑149 (MQ=255)gAAAACGCCTGTGACCGCCAGACGCTGCACAGCCGGCTGAACGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCCCAAGCTTTTTGCAGGCCCCCACCAg < 5:309270/149‑1 (MQ=255) tgACCGCCAGACGCTGCACAGCCGGCTGAACGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCgg < 8:11459/148‑1 (MQ=255) gACCGCCAGACGCTGCACAGCCGGCTGAACGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGt > 7:85660/1‑149 (MQ=255) ccGCCAGACGCTGCACAGCCGGCTGAACGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTgg < 4:345484/149‑1 (MQ=255) cGCCAGACGCTGCACAGCCGGCTGAACGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTggg > 8:73117/1‑149 (MQ=255) gCCAGACGCTGCACAGCCGGCTGAACGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGTCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTgggg < 2:210907/149‑1 (MQ=255) gCCAGACGCTGCACAGCCGGCTGAACGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTgggg < 8:85660/149‑1 (MQ=255) gCCAGACGCTGCACAGCCGGCTGAACGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTgggg < 7:145816/149‑1 (MQ=255) cAGACGCTGCACAGCCGGCTGAACGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGt > 8:136229/1‑149 (MQ=255) tGCACAGCCGGCTGAACGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAggggg > 5:360276/1‑149 (MQ=255) acaGCCGGCTGAACGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACCCCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCCGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCg > 3:202491/1‑149 (MQ=255) ccGGCTGAACGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTg > 6:34000/1‑149 (MQ=255) ccGGCTGAACGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTg > 2:291686/1‑149 (MQ=255) ccGGCTGAACGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTg > 8:339671/1‑149 (MQ=255) ggCTGAACGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTgcg < 7:12260/149‑1 (MQ=255) ggCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGt < 5:34000/149‑1 (MQ=255) ccGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCcac < 7:136229/149‑1 (MQ=255) gtggtCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATa < 2:250746/149‑1 (MQ=255) aCCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAAt < 1:238157/149‑1 (MQ=255) cccccGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCCGGCAAC‑‑GCCTGGTgggggc < 7:128260/109‑2 (MQ=38) ccccGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATa > 4:72603/1‑148 (MQ=255) cccGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATaa > 1:340822/1‑148 (MQ=255) ccGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATaaa > 7:184153/1‑148 (MQ=255) cGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATaaaaa < 8:184153/149‑1 (MQ=255) cGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACaa < 6:186310/149‑1 (MQ=255) cTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACaa > 5:309738/1‑147 (MQ=255) tGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑CCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACaa > 6:246469/1‑146 (MQ=255) tGAAACAGCCGACTGGGTCGCCGAACCACACAGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCAGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACaa > 4:245696/1‑146 (MQ=255) aaaCAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTTTCGCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAag < 1:291686/147‑1 (MQ=255) aaCAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGaa > 8:238311/1‑148 (MQ=255) ccGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACaa < 1:331639/138‑1 (MQ=255) ccGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAAc > 3:335379/1‑148 (MQ=255) ccGACTGGGTCGCCGAACCACACCACCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACAAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTCCAGGTGGACAAATAGACAATAAAAACaa > 2:331639/1‑138 (MQ=255) gACTGGGTCGCCGAACAAAACAGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCAAAAGGAGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCTCTGCATGTGGCCACATAGACAATAAAAACAAGAGAACAAACCAt > 2:306203/1‑149 (MQ=255) ggTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCt < 3:107366/147‑1 (MQ=255) gCCGAACCACACCGCCACGGCTGAGCCCCGACATCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGATCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACt > 2:219820/1‑149 (MQ=255) gCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACt > 1:358382/1‑149 (MQ=255) ccGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACtt < 7:73117/149‑1 (MQ=255) ccGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCCCACtt < 7:339671/149‑1 (MQ=255) cacaCCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTggg > 6:16989/1‑148 (MQ=255) cacaCCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGc > 1:38178/1‑149 (MQ=255) cacaCCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGc > 4:271475/1‑149 (MQ=255) cacaCCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGc > 7:308497/1‑149 (MQ=255) acacCGCCACGGCTGAGCCCCGAGAGCCTCAAGCTTTTTGCAGGCCCCCACCTGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCTTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGcc < 8:196420/149‑1 (MQ=255) cacCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCt > 2:269366/1‑149 (MQ=255) acCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCt > 7:220978/1‑148 (MQ=255) cGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGAt > 6:36289/1‑149 (MQ=255) gCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGAt > 4:63453/1‑148 (MQ=255) ccACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCa > 4:331369/1‑149 (MQ=255) aCGGCTGAGCCCCGATACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCAtg > 2:107881/1‑149 (MQ=255) aCGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCAtg < 8:220978/149‑1 (MQ=255) aCGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCAtg < 3:63453/149‑1 (MQ=255) gCTGAGCCCCGACACCCTAAAGCTTTTGGCAGGCCCCCACCAGGCGGT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCAtggtg < 2:358382/149‑1 (MQ=255) tGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACTAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATggtggt < 5:126957/149‑1 (MQ=255) aGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATggtggt < 2:340822/147‑1 (MQ=255) aGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGgtggtg < 1:269366/148‑1 (MQ=255) gCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGAc < 3:271475/149‑1 (MQ=255) ccccGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGAcc < 4:335379/149‑1 (MQ=255) gACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCa < 4:202491/149‑1 (MQ=255) acacCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGGT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCac < 8:331591/149‑1 (MQ=255) ccTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCacctac < 5:36289/149‑1 (MQ=255) ccTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCacctac > 3:260318/1‑149 (MQ=255) ccTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTAGTGACCTTCacctac > 6:57644/1‑149 (MQ=255) cTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCTGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCacctacc > 6:378164/1‑149 (MQ=255) cTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCacctacc < 3:331369/149‑1 (MQ=255) tCAAGCTTTTTTCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTTGACACATAGACAATAAAAACAACAGAACAAACCATGCTCGCACTTCTGTACCTGATCAtg > 4:134123/1‑129 (MQ=255) tCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCacctacct > 7:80615/1‑149 (MQ=255) tCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAAAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCacctacct > 1:304437/1‑149 (MQ=255) cAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCa < 6:353470/126‑1 (MQ=255) cAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCa > 1:309681/1‑126 (MQ=255) cAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCa > 5:353470/1‑126 (MQ=255) aaGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCACCTACCTGa < 2:38178/149‑1 (MQ=255) gCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCACCTACCTGATc < 8:308497/149‑1 (MQ=255) gCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGATCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCACCTACCTGATc < 1:219820/149‑1 (MQ=255) tttttGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATggtggt < 7:193811/128‑1 (MQ=255) tttttGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATggtggt > 8:193811/1‑128 (MQ=255) tttttGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCACCTACCTGATCAt > 4:37688/1‑149 (MQ=255) tttttGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCACCTACCTGATCAt > 5:250/1‑149 (MQ=255) tttGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCTCCTACCTGATCAt < 1:107881/147‑1 (MQ=255) ttGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTAGTGACCTTCACCTACCTGATCATGa < 5:57644/148‑1 (MQ=255) ctgacccccACCCGGCAAC‑‑GCCTGGTGGGGGCCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCACCTACCTGATCATGAGTa > 8:25402/5‑148 (MQ=255) aGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCACCTACCTGATCATGAGTaaa < 4:260318/149‑1 (MQ=255) ccccACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCAtggtg < 5:2495/115‑1 (MQ=255) ccccACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCAtggtg > 6:2495/1‑115 (MQ=255) ccccACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCACCTACCTGATCa < 4:351409/137‑1 (MQ=255) ccccACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCACCTACCTGATCATGAGTAAACGcc > 1:46147/1‑149 (MQ=255) ccccACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCACCTACCTGATCATGAGTAAACGc > 2:352544/1‑148 (MQ=255) cccACCCGGCAAC‑‑GCCTGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCACCTACCTGATCATGAGTAAACGcc > 5:71831/1‑148 (MQ=255) cccACCCGGCAAC‑‑GCCTGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCACCTACCTGATCATGAGTAAACGcc < 6:71831/148‑1 (MQ=255) cccACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCACCTACCTGATCAt < 5:65344/137‑1 (MQ=255) cccACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCACCTACCTGATCAt > 6:65344/1‑137 (MQ=255) cccACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCACCTACCTGATCATGAGTAAACGCCt > 2:172670/1‑149 (MQ=255) cccACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCACCTACCTGATCATGAGTAAACGCCt < 8:80615/149‑1 (MQ=255) ccaccaGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCACCTACCTGATCATGAGTAAACGCCTg > 3:215684/1‑149 (MQ=255) caccaGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCacctacct < 8:48042/129‑1 (MQ=255) caccaGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCacctacct > 7:48042/1‑129 (MQ=255) accaGGCGTT‑‑GCCGGGTGGGGGTCAGGTGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCACCTACCTGATCATGAGTAAACGCCTGTc < 3:245696/149‑1 (MQ=255) | GAAAACGCCTGTGACCGCCAGACGCTGCACAGCCGGCTGAACGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTT‑‑GCCGGGTGGGGGTCAGGGGGCCGTCTGCGCTGCAGGTGGCCACATAGACAATAAAAACAAGAGAACAAACCATGCTCGCACTTCTGGGCCTGATCATGGTGGTGACCTTCACCTACCTGATCATGAGTAAACGCCTGTCACC > NC_002947/2340556‑2340851 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |