| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,440,149 | A→C | 5.0% | K297T (AAG→ACG) | pcaF‑II → | beta‑ketoadipyl‑CoA thiolase subunit beta |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,440,149 | 0 | A | C | 5.0% | 388.2 / 9.4 | 120 | K297T (AAG→ACG) | pcaF‑II | beta‑ketoadipyl‑CoA thiolase subunit beta |
| Reads supporting (aligned to +/- strand): ref base A (56/57); new base C (4/2); total (60/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.79e-01 | |||||||||||
Only 100 of 127 total aligned reads displayed.
GCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAGATGGATGAGAAGGTTAACCTGCACGGCGGCGCCATTGCTTTGGG > NC_002947/2440002‑2440296 | gcCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCg > 1:364826/1‑149 (MQ=255) gTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGc < 6:221639/147‑1 (MQ=255) gTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCgg > 1:148756/1‑149 (MQ=255) gTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCgg > 6:377030/1‑149 (MQ=255) gATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTg < 2:364826/148‑1 (MQ=255) aTCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGAc < 3:166687/149‑1 (MQ=255) aTCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CGCACGCTTGAGGGCtttct < 5:118383/149‑4 (MQ=255) tCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCTGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCCCGCACGCTTGag < 8:5984/148‑2 (MQ=255) tCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATg > 2:247193/1‑149 (MQ=255) aTGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGc < 4:172105/149‑1 (MQ=255) tCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACTGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCg < 1:95878/148‑1 (MQ=255) tCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCg < 8:64035/148‑1 (MQ=255) cGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATTGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGata < 1:77064/149‑1 (MQ=255) cGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGata < 1:171196/149‑1 (MQ=255) cGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGat < 4:8471/148‑1 (MQ=255) ggTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGatat > 5:141983/1‑149 (MQ=255) aGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGAc < 4:352318/149‑1 (MQ=255) gCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGc < 6:86187/127‑1 (MQ=255) gCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGc > 5:86187/1‑127 (MQ=255) ccATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATc < 1:284792/149‑1 (MQ=255) ccATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATc < 5:181528/149‑1 (MQ=255) cATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATc > 3:15753/1‑148 (MQ=255) aTGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATc > 6:15232/1‑147 (MQ=255) tGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAg > 5:1867/1‑149 (MQ=255) cTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGCCCATGGCCGATATCGACTTCATCGAGC‑TCat > 6:272468/1‑148 (MQ=255) cTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATc < 6:378121/141‑1 (MQ=255) cTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATc > 5:378121/1‑141 (MQ=255) cTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCaa > 7:28672/1‑149 (MQ=255) tCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAAc > 2:243029/1‑149 (MQ=255) ggTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGAc < 7:342815/132‑1 (MQ=255) ggTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGAc > 8:342815/1‑132 (MQ=255) gTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGaa < 6:342252/149‑1 (MQ=255) tATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATAGACCCAGAAAGCCACTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGaa < 1:96102/149‑1 (MQ=255) ccAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCt > 4:71431/1‑149 (MQ=255) cAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCtt > 5:356116/1‑149 (MQ=255) cAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCtt < 2:205632/149‑1 (MQ=255) ctccATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCtt < 1:79920/146‑1 (MQ=255) aGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTc > 4:264510/1‑149 (MQ=255) aGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTc > 8:78419/1‑149 (MQ=255) aGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTc > 4:135026/1‑149 (MQ=255) gCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCg < 3:135026/149‑1 (MQ=255) ccATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGc > 8:191613/1‑149 (MQ=255) cATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCCGGCTTGACCATGGCCGATATCGACTTAATCGAGC‑TCAACGAAGccgt > 2:79920/1‑143 (MQ=255) aTTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTg > 4:356293/1‑149 (MQ=255) ggTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAgg > 6:229798/1‑149 (MQ=255) gTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCtt > 6:146506/1‑95 (MQ=255) tCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAgg > 5:4374/1‑144 (MQ=255) cGTTCGATGGCAGTGGGCTGTGTCGACGCGGCAATCATGGGCTACGGCCCGGTGCGATCGACCCAGAAAGCC‑CTGAAGCGTGGGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCTCCGAAGGCTTCGCTGCGCAGGCCCTGc < 6:119843/148‑1 (MQ=255) cGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTg > 7:333585/1‑149 (MQ=255) gATGGCAGTGTCCGGTGTCGTCCCGTCAATCATGGTCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACTAAGCCTTCGCTGCGCAGGCCCTGCCCGTg < 6:356116/148‑1 (MQ=255) aTGGCAGGGGCCGGTGTCGACCCGGCAATCATTGGCCACGGCCCGGTGGCATCGTACCATTAACCC‑CTCAAGCGTGCCGGCTTGAACATGGCCGATATCGACTTCCTCGAGCTTCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGc < 1:247193/149‑1 (MQ=255) gTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGa > 4:79353/1‑149 (MQ=255) gCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACtt < 5:323325/149‑1 (MQ=255) gCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACtt < 5:15232/149‑1 (MQ=255) cGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGATTTGa < 8:161664/149‑1 (MQ=255) cGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGa < 5:229798/149‑1 (MQ=255) gtCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGt > 6:301112/1‑149 (MQ=255) cccGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGATC‑TCAACGAAGcc > 6:210645/1‑103 (MQ=255) cccGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGATC‑TCAACGAAGcc < 5:210645/103‑1 (MQ=255) cGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGa > 6:5866/1‑148 (MQ=255) cGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGAc < 8:333585/149‑1 (MQ=255) cAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAg < 5:301112/149‑1 (MQ=255) tCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAgatg > 8:322211/1‑149 (MQ=255) tCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAgatg > 4:109172/1‑149 (MQ=255) tCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAgatg > 1:206897/1‑149 (MQ=255) aTGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAgatgg < 5:5866/148‑1 (MQ=255) aTGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAgatgg < 5:377030/148‑1 (MQ=255) tGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAgatggat < 3:264510/149‑1 (MQ=255) tGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAgatggat < 6:145101/149‑1 (MQ=255) tGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAgatggat < 3:71431/149‑1 (MQ=255) gggCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGat > 5:41664/1‑64 (MQ=255) gggCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGat < 6:41664/64‑1 (MQ=255) cTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACATGAAAGTGCTCGACAAGATGGATcag > 7:249498/1‑148 (MQ=255) tACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAGATGGATgag > 2:16413/1‑147 (MQ=255) ggCCCGGTGCCATCGACCCAGGAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAGATGGATGAGAAGGt < 7:97219/149‑1 (MQ=255) ccGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAGATGGATGAGAAGGTTaa > 6:182510/1‑149 (MQ=255) cGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAGATGGATGAGAAGGTTAAc < 1:16413/149‑1 (MQ=255) cGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAGATGGATGAGAAGGTTAAc < 6:1867/149‑1 (MQ=255) tCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAGATGGATGAGAAGGTTAACCTGCAcgg > 4:298124/1‑149 (MQ=255) cccAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGc < 7:63812/67‑1 (MQ=255) tggtcaaGCC‑CGCACGCTTGAGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAGATGGATGAGAAGGTTAACCTGCACGgcggcg > 1:336428/6‑149 (MQ=255) ccAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAGATGGATGAGAAGGTTAACCTGCACGgcggcg > 2:129471/1‑149 (MQ=255) ccAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAGATGGATGAGAAGGTTAACCTGCACGgcggcg > 8:243198/1‑149 (MQ=255) tcaaGCC‑CGCACGCTTGAGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAGATGGATGAGAAGGTTAACCTGCACGGCGGCGCCa > 8:77196/3‑149 (MQ=255) tcaaGCC‑CGCACGCTTGAGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAGATGGATGAGAAGGTTAACCTGCACGGCGGCGCCa > 3:317129/3‑149 (MQ=255) gAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAGATGGATGAGAAGGTTAACCTGCACGGCGGCGCCa > 6:320454/1‑149 (MQ=255) aaaGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAGATGGATGAGAAGGTTAACCTGCACGGCGGCGCCAt > 7:242897/1‑149 (MQ=255) gCC‑CGCACGCTTGAGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAGATGGATGAGAAGGTTAACCTGCAc < 6:328588/135‑1 (MQ=255) gCC‑CGCACGCTTGAGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAGATGGATGAGAAGGTTAACCTGCAc > 5:328588/1‑135 (MQ=255) c‑cTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGTGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAGATGGATGAGAAGGTTAACCTGCACGGCGGCGCCATTGCtt > 6:59178/1‑149 (MQ=255) c‑cTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAGATGGATGAGAAGGTTAACCTGCACGGCGGCGCCATTGCtt > 4:26476/1‑149 (MQ=255) c‑cTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAGATGGATGAGAAGGTTAACCTGCACGGCGGCGCCATTGCtt < 3:109172/149‑1 (MQ=255) tCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAGATGGATGAGAAGGTTAACCTGCACggcggc > 5:238436/1‑137 (MQ=255) tCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAGATGGATGAGAAGGTTAACCTGCACggcggc < 6:238436/137‑1 (MQ=255) cAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAGATGGATGAGAAGGTTAACCTGCACGGCGGCGCCATTGCTTTgg > 6:11488/1‑149 (MQ=255) aaGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAGATGGATGAGAAGGTTAACCTGCACGGCGGCGCCATTGCTTTgt < 7:243198/148‑2 (MQ=255) aaGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAGATGGATGAGAAGGTTAACCTGCACGGCGGCGCCATTGCTTTggg < 4:10772/149‑1 (MQ=255) aaGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAGATGGATGAGAAGGTTAACCTGCACGGCGGCGCCATTGCTTTg < 6:53733/147‑1 (MQ=255) aaGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAGATGGATGAGAAGGTTAACCTGCACGGCGGCGCCATTGCTTTg < 3:83796/147‑1 (MQ=255) aaGCGTGCGGGCTTGACCATGGCCGAAATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAGATGGATGAGAAGGTTAACCTGCACGGCGGCGCCATTGCTTTgg < 5:272468/148‑1 (MQ=255) | GCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCC‑CTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGC‑TCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAAGACTTGAAAGTGCTCGACAAGATGGATGAGAAGGTTAACCTGCACGGCGGCGCCATTGCTTTGGG > NC_002947/2440002‑2440296 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |