| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,447,853 | A→G | 5.9% | L1077P (CTG→CCG) | PP_2146 ← | SNF2/RAD54 family helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,447,853 | 0 | A | G | 5.9% | 406.4 / 10.0 | 136 | L1077P (CTG→CCG) | PP_2146 | SNF2/RAD54 family helicase |
| Reads supporting (aligned to +/- strand): ref base A (59/68); new base G (4/4); total (63/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.59e-01 | |||||||||||
Only 100 of 144 total aligned reads displayed.
GTCGGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGCTCTATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCTGGCCGATGCGGTAGGCACGGTCGGTAGCCTGGTTTTCGCTCGCCGG > NC_002947/2447706‑2448001 | tCGGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGCTCTATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCTCCGTCcag > 8:302172/1‑148 (MQ=255) tCGGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGCTCTATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCcag > 4:282687/1‑148 (MQ=255) gacAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGCTCTATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCCCCGTCcagca < 5:64051/146‑1 (MQ=255) gCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGCTCTATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAgg < 5:167063/149‑1 (MQ=255) cggccCTTTCGCGGGTAAACCCGCTCCTACGCTCTATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTggcgg > 2:168728/1‑149 (MQ=255) cggccCTTTCGCGGGTAAACCCGCTCCTACGCTCTATCCCACTTTGGCCTACCGCACGCGCTTCCCGCGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCAATGCCCACCCTGACCGCCGACCAGCAGGCTggcag > 8:176163/1‑147 (MQ=255) ggccCTTTCGCGGGTAAACCCGCTCCTACGCTCTATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTggcggc < 6:116844/149‑1 (MQ=255) ccTTTCGCGGGTAAACCCGCTCCTACGCTCTATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCaa > 4:126737/1‑149 (MQ=255) tCGCGGGTAAACCCGCTCCTACGCTCTATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAAtg < 5:263558/147‑1 (MQ=255) gcgGGTAAACCCGCTCCTACGCTCTATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAAtgctgc < 5:129717/149‑1 (MQ=255) gcgGGTAAACCCGCTCCTACGCTCTATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAAtgctgc < 6:297777/149‑1 (MQ=255) tAAACCCGCTCCTACGCTCTATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCtttt < 3:275226/149‑1 (MQ=255) aaaCCCGCTCCTACGCTCTATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTc > 7:355440/1‑149 (MQ=255) cccGCTCCTACGCTCTATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCctg < 2:268405/149‑1 (MQ=255) ccGCTCCTACGCTCTATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCctgc > 7:271805/1‑149 (MQ=255) cTCCTACGCTCTATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCtgctgc < 1:194994/149‑1 (MQ=255) tCCTACGCTCTATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCGGCAGGCTGGCGGCCAATGCTGCCTTTTCCtgctgc > 7:148863/1‑148 (MQ=255) tCCTACGCTCTATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTg < 4:129923/121‑1 (MQ=255) cTACGCTCTATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGcaac < 8:150823/149‑1 (MQ=255) tACGCTCTATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGcc > 2:27911/1‑133 (MQ=255) tACGCTCTATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGcc < 1:27911/133‑1 (MQ=255) tACGCTCTATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGcaac > 5:163580/1‑148 (MQ=255) tACGCTCTATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGcaac > 3:83073/1‑148 (MQ=255) tACGCTCTATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGcaac > 5:112486/1‑148 (MQ=255) cGCTCTATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGcaaca < 3:282687/147‑1 (MQ=255) gCTCTATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCctgc < 7:90985/139‑1 (MQ=255) tATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTgg < 4:263071/147‑1 (MQ=255) tATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTgg < 8:354230/147‑1 (MQ=255) aTCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGAtc > 3:237718/1‑149 (MQ=255) tCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGAtct > 4:341778/1‑149 (MQ=255) ccccTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGAtcttc < 6:163580/149‑1 (MQ=255) ccccTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGAtcttc < 5:98999/149‑1 (MQ=255) ccccTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGAtcttc > 6:30211/1‑149 (MQ=255) ccccTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGAtcttc > 1:350120/1‑149 (MQ=255) cccTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTc < 2:127094/126‑1 (MQ=255) cccTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTc > 1:127094/1‑126 (MQ=255) ccTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGAtcttctc > 5:39543/1‑149 (MQ=255) ccTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGAtcttct < 7:102623/148‑1 (MQ=255) tttGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGAtcttctctt > 5:195367/1‑149 (MQ=255) tGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGAtcttctctt < 3:369075/147‑1 (MQ=255) gCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGcaac > 4:124988/1‑129 (MQ=255) gCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGcaac < 3:124988/129‑1 (MQ=255) ccTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCACTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCAcc < 8:23196/149‑1 (MQ=255) cTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCg < 1:128056/149‑1 (MQ=255) cgcccgcGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCtgctgc > 5:255439/1‑120 (MQ=255) cgcccgcGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTAcc > 2:271625/1‑149 (MQ=255) cgcccgcGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCCTCCAGCAGGCTGGCGGCCAATGCTGcc < 2:55506/108‑1 (MQ=255) cgcccgcGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCCTCCAGCAGGCTGGCGGCCAATGCTGcc > 1:55506/1‑108 (MQ=255) cccgcGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTAcccc > 7:345007/1‑149 (MQ=255) ccgcGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCg > 7:333187/1‑149 (MQ=255) gcgcTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCggg < 5:161174/149‑1 (MQ=255) gcTTCCCGGGCAATGGCGCGAACAGGCCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGt > 5:209904/1‑148 (MQ=255) cccGTGCATTGGCGCGAAGAGGTCCTAGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCATGCTGGCTGCCAATGCTGCCTTTTCCTGCTGCACCAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATc < 7:176163/148‑1 (MQ=255) cccGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAAt < 6:259150/147‑1 (MQ=255) cccGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAAt < 5:283913/147‑1 (MQ=255) cccGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATc < 1:168728/148‑1 (MQ=255) ccGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCa < 4:362896/148‑1 (MQ=255) cGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCTGGACGGCGGGCAGGCTgg > 7:39844/1‑81 (MQ=25) cGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCAcc < 3:34152/131‑1 (MQ=255) cGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGc < 1:271625/149‑1 (MQ=255) ggCAATGGCTCGAACACGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCTTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCtt < 7:350254/149‑1 (MQ=255) tGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTgaac > 8:124081/1‑148 (MQ=255) ggCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTACTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTgaacac > 6:16719/1‑149 (MQ=255) gcgcGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTgaacac < 8:40509/148‑1 (MQ=255) cgcgAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTgaacacga < 6:165294/149‑1 (MQ=255) cgAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGGCGTTTCCTGCTGCACCAACTGGCTCTTCTCTGCCACCGTGCCCCGGGTAGTCAGCTTgagcacgacg > 4:219627/1‑147 (MQ=255) gggCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGt < 4:83073/149‑1 (MQ=255) gCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTa > 5:234917/1‑123 (MQ=255) gCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTa < 6:234917/123‑1 (MQ=255) gCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGttt < 8:354800/149‑1 (MQ=255) gCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATATACTATTACACCGTACCCCGGGTAATAATCTTGAACAAGAACACCGGttt > 3:257467/1‑149 (MQ=255) ccTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTgaaca > 7:64472/1‑135 (MQ=255) ccTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTgaaca < 8:64472/135‑1 (MQ=255) ccTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTg > 4:89964/1‑149 (MQ=255) gATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTcc < 2:172535/148‑1 (MQ=255) gATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCt < 3:89964/149‑1 (MQ=255) gATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCt < 6:39543/149‑1 (MQ=255) gATGTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCt < 4:315137/149‑1 (MQ=255) tttCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGttt < 6:261758/142‑1 (MQ=255) tttCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGttt > 5:261758/1‑142 (MQ=255) tcttcATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCTGGc < 5:16719/148‑1 (MQ=255) ttcATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCcagc > 3:205602/1‑43 (MQ=255) ttcATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCcagc < 4:205602/43‑1 (MQ=255) tcATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCATGGCCGAt > 1:250126/1‑149 (MQ=255) cATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGAtctt > 6:52675/1‑88 (MQ=255) cATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGAtctt < 5:52675/88‑1 (MQ=255) gCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCTGGCCGATGCGGt < 3:126737/149‑1 (MQ=255) ccAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCTGGCCGATGCgg > 1:183227/1‑147 (MQ=255) aTTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCGTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCTGGCCGATGCGGTAGGCAcggtcg < 8:333187/149‑1 (MQ=255) ccgccAGCCTGCTGGACGGCGGGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCTGGCCGATGCGGTAGGCAcggtcgg > 7:252728/4‑148 (MQ=255) cccAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCTGGCCGATGCGGTAGGCACGGTCGGTa < 6:209904/148‑1 (MQ=255) ccAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCTGGCCGATGCGGTAGGCACGGTCGGTAGc < 3:220735/149‑1 (MQ=255) ccAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCTGGCCGATGCGGTAGGCACGGTCGGTAGc > 5:201880/1‑149 (MQ=255) tGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATc > 1:53020/1‑87 (MQ=255) tGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATc < 2:53020/87‑1 (MQ=255) tGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCTGGCCGATGCGGTAg < 8:148521/129‑1 (MQ=255) cgccgTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCTGGCCGATGc > 3:91479/1‑120 (MQ=255) cgccgTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCTGGCCGATGc < 4:91479/120‑1 (MQ=255) cgTCCTGCAGTGTGGCTGCCAATGCTGACTTTTCCTGCTGAAACAACTTGATCTTCTCTTCAAACGTACCATGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCTGGCCGATGCTGTAGTAACTGTCGGTAGCCTGGTTTtcgctc < 6:112486/149‑1 (MQ=255) cagcagGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCTGGCCGATGCGGTAGGCACGGTCGGTAGCCTGGTTTTCGCTCGcc < 4:237718/148‑1 (MQ=255) | GTCGGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGCTCTATCCCCCTTTGGCCTACCGCCCGCGCTTCCCGGGCAATGGCGCGAACAGGGCCTCGATTTCTTCATCGCCAAGCCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCTGGCCGATGCGGTAGGCACGGTCGGTAGCCTGGTTTTCGCTCGCCGG > NC_002947/2447706‑2448001 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |