| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,488,197 | G→C | 5.9% | intergenic (+53/‑349) | PP_2182 → / → PP_2183 | hypothetical protein/formate dehydrogenase subunit gamma |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,488,197 | 0 | G | C | 5.9% | 397.5 / 10.4 | 119 | intergenic (+53/‑349) | PP_2182/PP_2183 | hypothetical protein/formate dehydrogenase subunit gamma |
| Reads supporting (aligned to +/- strand): ref base G (52/60); new base C (3/4); total (55/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.18e-01 | |||||||||||
Only 100 of 119 total aligned reads displayed.
GCAGCCAGGACCGACGCAATCGTGCGAAGTCAAAGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTCGGTTTCAGAATGCGCC > NC_002947/2488050‑2488341 | gCAGCCAGGACCGACGCAATCGTGCGAAGTCAAAGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGc > 4:366543/1‑149 (MQ=255) cAGCCAGGACCGACGCAATCGTGCGAAGTCAAAGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCt > 7:240960/1‑149 (MQ=255) cAGCCAGGACCGACGCAATCGTGCGAAGTCAAAGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGCCt < 3:238198/149‑1 (MQ=255) cAGCCAGGACCGACGCAATCCTGCGAAGTCAAAGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCt < 7:286518/149‑1 (MQ=255) ccAGGACCGACGCAATCGTGCGAAGTCAAAGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTGTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGcc > 7:183782/1‑149 (MQ=255) ccAGGACCGACGCAATCGTGCGAAGTCAAAGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGcc < 2:263275/149‑1 (MQ=255) ccAGGACCGACGCAATCGTGCGAAGTCAAAGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGcc > 3:275818/1‑149 (MQ=255) ggACCGACGCAATCGTGCGAAGTCAAAGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTc < 3:366543/149‑1 (MQ=255) gACCGACGCAATCGTGCGAAGTCAAAGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCt < 8:102988/149‑1 (MQ=255) aCCGACGCAATCGTGCGAAGTCAAAGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTg < 3:354947/149‑1 (MQ=255) cGACGCAATCGTGCGAAGTCAAAGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTgg > 5:9670/1‑148 (MQ=255) aCGCAATCGTGCGAAGTCAAAGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAg < 3:237403/149‑1 (MQ=255) tCGTGCGAAGTCAAAGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGCCTGCCAGACGGCAGCCCCgg < 1:308209/149‑1 (MQ=255) cGAAGTCAAAGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATg < 1:48166/149‑1 (MQ=255) aaGTCAAAGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGa < 6:359260/149‑1 (MQ=255) aGTCAAAGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGAc < 1:332962/149‑1 (MQ=255) aaaGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGc < 6:179056/138‑1 (MQ=255) aaaGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGc > 5:179056/1‑138 (MQ=255) aaaGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGCCTGCCAGACGGCAGCCCCGGCAAt < 1:201851/141‑1 (MQ=39) aaaGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGCCTGCCAGACGGCAGCCCCGGCAAt > 2:201851/1‑141 (MQ=39) aggcccaggcccAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGtt > 5:260262/1‑149 (MQ=255) ggcccaggcccaGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTc < 4:215034/149‑1 (MQ=255) ccaggcccaggcTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGt > 6:297636/1‑149 (MQ=255) aggcccaggcTCCGGCCCCCGCCGCCGACACCCCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGGTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGTAGGCCCGGCAATGGACTAGGTTCGGttt < 5:321648/149‑1 (MQ=255) ggcccaggcTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTc < 8:183782/149‑1 (MQ=255) gcccaggcTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTc > 2:3168/1‑148 (MQ=255) cgagctcTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCga < 5:205687/143‑1 (MQ=255) cccaggcTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTGACATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCg < 1:296377/149‑1 (MQ=255) cccaggcTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTc > 7:21059/1‑147 (MQ=255) cccaggcTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGGTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGTAGGCCCGGCAATGGACTAGGTTCGGTTTCga < 8:240960/149‑1 (MQ=255) ccaggcTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTc > 1:276303/1‑146 (MQ=255) ccaggcTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCgag > 5:56897/1‑149 (MQ=255) ccaggcTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCgag > 7:199581/1‑149 (MQ=255) ccaggcTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCgag > 3:67418/1‑149 (MQ=255) aggcTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGagag > 2:258256/1‑149 (MQ=255) aggcTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGagag > 1:266996/1‑149 (MQ=255) tCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTgg > 4:9090/1‑110 (MQ=255) tCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTgg < 3:9090/110‑1 (MQ=255) tCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCga > 6:205687/1‑142 (MQ=255) cGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTg < 1:110045/147‑1 (MQ=255) cGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGt < 5:297636/149‑1 (MQ=255) cGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGt > 5:136173/1‑149 (MQ=255) gCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGtgc < 3:62858/149‑1 (MQ=255) ccgccgccgACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTGGGTTTGGAGGGCCTGGtgcagc > 6:202916/1‑146 (MQ=255) gccgACACCGCAACGGTGCAGTCTACCGACTGAGCTCTGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGa < 3:242435/149‑1 (MQ=255) ccgACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGAt < 2:214416/149‑1 (MQ=255) gACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATgg > 8:245685/1‑149 (MQ=255) gACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATgg > 7:316170/1‑149 (MQ=255) ctccccGCATCGGTGCATTCTACCGACTGTGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATgg < 8:236607/145‑1 (MQ=255) acacCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGt < 6:93226/149‑1 (MQ=255) cacCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGtt < 4:64548/149‑1 (MQ=255) acCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGttt > 7:207444/1‑149 (MQ=255) ccGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTc < 2:266996/149‑1 (MQ=255) cGCAACGGTGCAGTCTACCGACATATCTCAGTCGCGTTCAGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGGCGTCTGGCAGGCCCGGCAAGGGACTAGGATCGGTTTCGAGAGCCTGGTGCAAGCAAAGAGGGtaga > 7:236607/1‑145 (MQ=255) gCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCaa < 6:56897/149‑1 (MQ=255) aaCGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGa < 1:170932/149‑1 (MQ=255) gTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCa > 3:114388/1‑149 (MQ=255) tGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCAc < 8:21059/149‑1 (MQ=255) cAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCAcc < 4:275818/148‑1 (MQ=255) gTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGa > 3:46390/1‑149 (MQ=255) tCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAAc < 4:111744/126‑1 (MQ=255) tCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAAc > 3:111744/1‑126 (MQ=255) tCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGAt > 8:3164/1‑149 (MQ=255) ccGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCg < 1:272643/147‑1 (MQ=255) ccGACTGAGCTCAGTCGCGTTCTGCCCCGGAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCgg > 1:343546/1‑148 (MQ=255) cGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCa < 5:118855/149‑1 (MQ=255) aCTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAg > 4:288441/1‑149 (MQ=255) cTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGc < 8:207444/149‑1 (MQ=255) aGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGt > 3:75947/1‑149 (MQ=255) tCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTgg > 3:159498/1‑148 (MQ=255) tCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTgg > 6:106452/1‑148 (MQ=255) tCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTgg > 1:57594/1‑148 (MQ=255) tCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGc < 6:260262/149‑1 (MQ=255) aGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGCCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGc < 6:32993/147‑1 (MQ=255) tCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAga > 8:183951/1‑148 (MQ=255) tCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAga < 7:183951/148‑1 (MQ=255) tCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGcc > 7:191251/1‑149 (MQ=255) gCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCggg > 2:135174/1‑149 (MQ=255) ccccGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCGGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCgg < 6:9670/147‑1 (MQ=255) caccGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCCGCAAGCCGTGGCAGATGATGCCggg < 7:138121/146‑1 (MQ=255) ccGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCAcc < 6:338405/115‑1 (MQ=255) ccGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCAcc > 5:338405/1‑115 (MQ=255) ccGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCg > 2:21307/1‑149 (MQ=255) gcaGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTa < 2:343546/147‑1 (MQ=255) gCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGGTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATc < 4:46390/149‑1 (MQ=255) aTGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACg > 8:355122/1‑149 (MQ=255) tGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCCAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGt < 5:357780/149‑1 (MQ=255) cTG‑GATGGCAGGCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGTTTTCGAGAGCCTGGtgcatg < 1:201953/81‑1 (MQ=255) cTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGc > 4:228260/1‑149 (MQ=255) tG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCg > 4:247424/1‑149 (MQ=255) gATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTc < 7:245685/149‑1 (MQ=255) gCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTCGGttt > 5:19847/1‑147 (MQ=255) gCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCCGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTCGGTTTCa < 6:262487/149‑1 (MQ=255) cATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGCGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTCGGTTTCAGaa < 4:114388/149‑1 (MQ=255) aTTGCCGGGCCTGCCAGACGGCAGCCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTCGGttt < 4:97350/143‑1 (MQ=39) aTTGCCGGGCCTGCCAGACGGCAGCCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTCGGttt > 3:97350/1‑143 (MQ=39) aTTGCCGGGCCTGCCAGACGGCAGCCCCGGCAATGAGCTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGAGGATGCCGGGGCGTAATCACGTGCGTCGGTTTCAGAAt > 1:242193/1‑149 (MQ=38) ccGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGtgcat > 1:163536/1‑62 (MQ=255) ccGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTCGGTTTCAGAATgcgc < 3:357120/149‑1 (MQ=255) cGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTCGGTTTCAGAATGCGcc < 3:228260/149‑1 (MQ=255) | GCAGCCAGGACCGACGCAATCGTGCGAAGTCAAAGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTCGGTTTCAGAATGCGCC > NC_002947/2488050‑2488341 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |