| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,488,212 | G→C | 6.1% | intergenic (+68/‑334) | PP_2182 → / → PP_2183 | hypothetical protein/formate dehydrogenase subunit gamma |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,488,212 | 0 | G | C | 6.1% | 379.8 / 10.2 | 114 | intergenic (+68/‑334) | PP_2182/PP_2183 | hypothetical protein/formate dehydrogenase subunit gamma |
| Reads supporting (aligned to +/- strand): ref base G (49/58); new base C (4/3); total (53/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.03e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.24e-01 | |||||||||||
Only 100 of 115 total aligned reads displayed.
AATCGTGCGAAGTCAAAGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTCGGTTTCAGAATGCGCCTGGTCGCTCGCATACAAC > NC_002947/2488067‑2488359 | aaTCGTGCGAAGTCAAAGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGccc > 3:64548/1‑149 (MQ=255) tCGTGCGAAGTCAAAGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGCCTGCCAGACGGCAGCCCCgg < 1:308209/149‑1 (MQ=255) cGAAGTCAAAGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATg < 1:48166/149‑1 (MQ=255) cGAAGTCAAAGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATg < 7:170395/149‑1 (MQ=255) aaGTCAAAGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGa < 6:359260/149‑1 (MQ=255) aGTCAAAGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGAc < 1:332962/149‑1 (MQ=255) aaaGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGc > 5:179056/1‑138 (MQ=255) aaaGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGc < 6:179056/138‑1 (MQ=255) aaaGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAgg > 3:215034/1‑149 (MQ=255) aaaGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGCCTGCCAGACGGCAGCCCCGGCAAt < 1:201851/141‑1 (MQ=39) aaaGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGCCTGCCAGACGGCAGCCCCGGCAAt > 2:201851/1‑141 (MQ=39) aggcccaggcccAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGtt > 5:260262/1‑149 (MQ=255) ggcccaggcccaGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTc < 4:215034/149‑1 (MQ=255) ccaggcccaggcTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGt > 6:297636/1‑149 (MQ=255) ggcccaggcTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTc < 8:183782/149‑1 (MQ=255) gcccaggcTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTc > 2:3168/1‑148 (MQ=255) cgagctcTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCga < 5:205687/143‑1 (MQ=255) cccaggcTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTGACATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCg < 1:296377/149‑1 (MQ=255) cccaggcTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTc > 7:21059/1‑147 (MQ=255) cccaggcTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGGTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGTAGGCCCGGCAATGGACTAGGTTCGGTTTCga < 8:240960/149‑1 (MQ=255) ccaggcTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTc > 1:276303/1‑146 (MQ=255) ccaggcTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCgag > 5:56897/1‑149 (MQ=255) ccaggcTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCgag > 7:199581/1‑149 (MQ=255) ccaggcTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCgag > 3:67418/1‑149 (MQ=255) aggcTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGagag > 2:258256/1‑149 (MQ=255) aggcTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGagag > 1:266996/1‑149 (MQ=255) ggcTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATTGACTAGGTTCGGTTTCGAGAGc > 7:223906/1‑149 (MQ=255) tCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCga > 6:205687/1‑142 (MQ=255) cGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTg < 1:110045/147‑1 (MQ=255) cGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGt < 5:297636/149‑1 (MQ=255) ggCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGtg < 8:222899/149‑1 (MQ=255) gCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGtgc < 3:62858/149‑1 (MQ=255) ccgcggccgACACCGCAACGGTGCAGTCTACCGAGTGAGCTGAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGtgcatgc < 4:200120/149‑1 (MQ=255) ccgccgccgACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTGGGTTTGGAGGGCCTGGtgcagc > 6:202916/1‑146 (MQ=255) gccgACACCGCAACGGTGCAGTCTACCGACTGAGCTCTGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGa < 3:242435/149‑1 (MQ=255) gACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATgg > 7:316170/1‑149 (MQ=255) gACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATgg > 8:245685/1‑149 (MQ=255) ctccccGCATCGGTGCATTCTACCGACTGTGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATgg < 8:236607/145‑1 (MQ=255) acacCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGt < 6:93226/149‑1 (MQ=255) cacCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGtt < 4:64548/149‑1 (MQ=255) cacCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGtt < 2:276303/149‑1 (MQ=255) acCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGttt > 7:207444/1‑149 (MQ=255) ccGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTc < 2:266996/149‑1 (MQ=255) cGCAACGGTGCAGTCTACCGACATATCTCAGTCGCGTTCAGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGGCGTCTGGCAGGCCCGGCAAGGGACTAGGATCGGTTTCGAGAGCCTGGTGCAAGCAAAGAGGGtaga > 7:236607/1‑145 (MQ=255) aaCGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGa < 1:170932/149‑1 (MQ=255) gTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCa > 3:114388/1‑149 (MQ=255) tGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCAc < 8:21059/149‑1 (MQ=255) tGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCAAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCAc > 6:357780/1‑149 (MQ=255) gTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGa > 3:46390/1‑149 (MQ=255) tCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAAc < 4:111744/126‑1 (MQ=255) tCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGAt > 8:3164/1‑149 (MQ=255) ccGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCg < 1:272643/147‑1 (MQ=255) cGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCa < 5:118855/149‑1 (MQ=255) aCTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAg > 4:288441/1‑149 (MQ=255) cTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGc < 8:207444/149‑1 (MQ=255) aGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGt > 3:75947/1‑149 (MQ=255) tCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTgg > 6:106452/1‑148 (MQ=255) tCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTgg > 1:57594/1‑148 (MQ=255) tCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTgg > 3:159498/1‑148 (MQ=255) tCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGc < 6:260262/149‑1 (MQ=255) aGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGCCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGc < 6:32993/147‑1 (MQ=255) tCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAga < 7:183951/148‑1 (MQ=255) tCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAga > 8:183951/1‑148 (MQ=255) gCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCggg > 2:135174/1‑149 (MQ=255) ccccGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCGGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCgg < 6:9670/147‑1 (MQ=255) caccGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCCGCAAGCCGTGGCAGATGATGCCggg < 7:138121/146‑1 (MQ=255) ccGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCAcc > 5:338405/1‑115 (MQ=255) ccGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCAcc < 6:338405/115‑1 (MQ=255) ccGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCg > 2:21307/1‑149 (MQ=255) gcaGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTa < 2:343546/147‑1 (MQ=255) gCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGGTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATc < 4:46390/149‑1 (MQ=255) aTGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACg > 8:355122/1‑149 (MQ=255) tGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCCAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGt < 5:357780/149‑1 (MQ=255) cTG‑GATGGCAGGCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGTTTTCGAGAGCCTGGtgcatg < 1:201953/81‑1 (MQ=255) cTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGc > 4:228260/1‑149 (MQ=255) tG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCg > 4:247424/1‑149 (MQ=255) tG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCg > 4:357120/1‑149 (MQ=255) gATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTc < 7:245685/149‑1 (MQ=255) aTGGCAGCGCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTCg < 1:3168/149‑1 (MQ=255) gCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTCGGttt > 5:19847/1‑147 (MQ=255) gCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTCGGTTTCa < 5:106452/149‑1 (MQ=255) gCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCCGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTCGGTTTCa < 6:262487/149‑1 (MQ=255) cATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGCGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTCGGTTTCAGaa < 4:114388/149‑1 (MQ=255) aTTGCCGGGCCTGCCAGACGGCAGCCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTCGGttt < 4:97350/143‑1 (MQ=39) aTTGCCGGGCCTGCCAGACGGCAGCCCCGGCAATGAGCTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGAGGATGCCGGGGCGTAATCACGTGCGTCGGTTTCAGAAt > 1:242193/1‑149 (MQ=38) ccGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGtgcat > 1:163536/1‑62 (MQ=255) ccGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGtgcat < 2:163536/62‑1 (MQ=255) ccGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTCGGTTTCAGAATgcgc < 3:357120/149‑1 (MQ=255) cGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTCGGTTTCAGAATGCGcc < 3:228260/149‑1 (MQ=255) ccGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGt > 4:223227/1‑120 (MQ=255) ccGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGt < 3:223227/120‑1 (MQ=255) cGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTCGGTTTCAGAATGTGCCTGGtcgctc > 3:170084/1‑149 (MQ=255) gTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTCGGTTTCAGAATGCGCCTGGtcgctcg < 1:21307/149‑1 (MQ=255) gacggCAGCCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTCGGTTTCAGAATGCGCCTGGtcgctcg > 5:193366/4‑148 (MQ=255) ggCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTCGGTTTCAGAATGCGCCTGGTCGCTCGCATa > 8:355766/1‑149 (MQ=255) gCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTCGGTTTCAGAATGCGCCTGGTCGCTCGCa < 2:57594/146‑1 (MQ=255) gCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTCGGTTTCAGAATGCGCCTGGTCGCTCGCATa > 2:87823/1‑148 (MQ=255) gCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGATGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTCGGTTTCAGAATGCGCCTGGTCGCTCGCAt < 7:63747/147‑1 (MQ=255) aGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTCGGTTTCAGAATGCGCCTGGTCGCTCGCATACaa > 6:7294/1‑149 (MQ=255) ggCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTCGGTTTCAGAATGCGCCTGGTCGCTCGCATACAAc > 8:136050/1‑149 (MQ=255) | AATCGTGCGAAGTCAAAGGCCCAGGCCCAGGCTCCGGCCCCCGCCGCCGACACCGCAACGGTGCAGTCTACCGACTGAGCTCAGTCGCGTTCTGCCCCGTAGCCATGCTG‑GATGGCAGCCCATTGCCGGGGCTGCCGTCTGGCAGGCCCGGCAATGGACTAGGTTCGGTTTCGAGAGCCTGGTGCATGCAACGATGGTTTCAAGACCCACCTGATCGGCAAGCCGTGGCAGATGATGCCGGGGCGTAATCACGTGCGTCGGTTTCAGAATGCGCCTGGTCGCTCGCATACAAC > NC_002947/2488067‑2488359 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |