| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,604,864 | C→A | 9.7% | intergenic (+26/‑36) | PP_2282 → / → PP_2283 | minor capsid protein 10/tail tubular protein A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,604,864 | 0 | C | A | 9.7% | 221.8 / 9.9 | 71 | intergenic (+26/‑36) | PP_2282/PP_2283 | minor capsid protein 10/tail tubular protein A |
| Reads supporting (aligned to +/- strand): ref base C (30/34); new base A (2/5); total (32/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.46e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
CTGGCGATGGAGTCGGACTACGACATCCGCCGTCAAGGCACCCTCAT‑GGTCGCCAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCGTAAACATCATGCTCAATACCATTGGCGAGTCGCCAGTCAACTCCCTGGATGATGGCCTTCCCGTAGCGGATGCCGC > NC_002947/2604722‑2605012 | cTGGCGATGGAGTCGGACTACGACATCTGCCGTCAAGGCACCCTCAT‑GGTCGCCAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCtt < 2:75908/149‑1 (MQ=255)cTGGCGATGGAGTCGGACTACGACATCCGCCGTCAAGGCACCCTCAT‑GGTCGCCAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCCCACACAAGGAAGTCCtt > 7:59209/1‑149 (MQ=255) tGGCGATGGAGTCGGACTACGACATCCGCCGTCAAGGCACCCTCAT‑GGTCGCCAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTtg > 5:122345/1‑149 (MQ=255) ggCGATGGAGTCGGACTACGACATCCGCCGTCAAGGCACCCTCAT‑GGTCGCCAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTtgt > 5:304434/1‑149 (MQ=255) gATGGAGTCGGACTACGACATCCGCCGTCAAGGCACCCTCAT‑GGTCGCCAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTtgtgtg > 2:40799/1‑149 (MQ=255) gATGGAGTCGGACTACGACATCCGCCGTCAAGGCACCCTCAT‑GGTCGCCAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTtgtgtg > 6:179251/1‑149 (MQ=255) gAGTCGGACTACGACATCCGCCGTCAAGGCACCCTCAT‑GGTCGCCAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCCCACACAAGGAAGTCCTTGAGTGAGGc < 8:59209/149‑1 (MQ=255) gTCGGACTACGACATCCGCCGTCAAGGCACCCTCAT‑GGTCGCCAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCCCACACAAGGAAGTCCTTGAGTGAGGCta < 6:255064/149‑2 (MQ=255) gTCGGACTACGACATCCGCCGTCAAGGCACCCTCAT‑GGTCGCCAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCCCACACAAGGAAGTCCTTGAGTGAGGCta < 5:35948/149‑2 (MQ=255) aCTACGACATCCGCCGTCAAGGCACCCTCATGGGTCGCCAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCtttttt > 1:226947/1‑149 (MQ=255) tACGACATCCGCCGTCAAGGCACCCTCAT‑GGTCGCCAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTc > 2:3173/1‑149 (MQ=255) gACATCCGCCGTCAAGGCACCCTCAT‑GGTCGCCAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTg > 5:268423/1‑149 (MQ=255) ccgccgTCAAGGCACCCTCAT‑GGTCGCCAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTggg > 2:265024/1‑130 (MQ=255) ccgccgTCAAGGCACCCTCAT‑GGTCGCCAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTggg < 1:265024/130‑1 (MQ=255) gTCAAGGCACCCTCAT‑GGTCGCCAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAAt > 8:263025/1‑149 (MQ=255) aaGGCACCCTCAT‑GGTCGCCAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCACCCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGa < 7:219001/148‑1 (MQ=255) aaGGCACCCTCAT‑GGTCGCCAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGa < 7:263025/148‑1 (MQ=255) aGGCACCCTCAT‑GGTCGCCAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAg < 2:226947/149‑1 (MQ=255) cACCCTCAT‑GGTCGCCAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGaca < 8:296182/149‑1 (MQ=255) aCCCTCAT‑GGTCGCCAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGacac > 7:214857/1‑149 (MQ=255) aCCCTCAT‑GGTCGCCAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGaca > 4:126658/1‑148 (MQ=255) ccTCAT‑GGTCGCCAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTc < 7:180424/149‑1 (MQ=255) tCAT‑GGTCGCCAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTggg < 5:171949/113‑1 (MQ=255) tCAT‑GGTCGCCAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTggg > 6:171949/1‑113 (MQ=255) aT‑GGTCGCCAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGccc < 4:259018/149‑1 (MQ=255) attctCGACAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGccc < 4:263945/145‑1 (MQ=255) gCCAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGa < 5:179251/149‑1 (MQ=255) ccAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGAc < 2:162454/149‑1 (MQ=255) cAAGAACGCCATGGGCCACGGCATACTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGAcc > 3:347752/1‑149 (MQ=255) gTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAg < 6:304434/149‑1 (MQ=255) aTGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATg < 3:3746/149‑1 (MQ=255) aTGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGCACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATg > 1:118519/1‑149 (MQ=255) gCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCg > 6:183489/1‑148 (MQ=255) ccACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCtt > 3:235378/1‑81 (MQ=255) ccACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCtt < 4:235378/81‑1 (MQ=255) ccACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTAGTGACTAGAAAATGAAGACAAACGCCCAAACGACCGAGCAAGATGCCGt > 8:56787/1‑148 (MQ=255) cGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAg > 4:175580/1‑138 (MQ=255) cGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAg < 3:175580/138‑1 (MQ=255) cGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCGTAAAc < 5:252499/149‑1 (MQ=255) cGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCGTAAAc < 1:40799/149‑1 (MQ=255) tcctccGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCGTAAAcatcat < 8:214857/149‑1 (MQ=255) tccGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCtttttttt > 7:16368/1‑87 (MQ=255) tccGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCtttttttt < 8:16368/87‑1 (MQ=255) tccGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCGTAAACATCATGCt > 8:212068/1‑149 (MQ=255) cGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCGTAAACATCATGCt < 6:268423/147‑1 (MQ=255) ccAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCGTaaa < 8:123548/135‑1 (MQ=255) ccAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCGTaaa > 7:123548/1‑135 (MQ=255) catcagcCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCTTAAACATCATGCTCAATAc < 4:347752/146‑1 (MQ=255) cagcCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCGTAAACATCATGCTCAATACCAt < 2:118519/149‑1 (MQ=255) cGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCGTAAACATCATGCTCAATACCATTGGc < 3:126658/149‑1 (MQ=255) gCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCGTAAACATCATGCTCAATACCATTGGCGAGTCGCCa < 1:3173/149‑1 (MQ=255) aaCCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCGTAAACATCATGCTCAATACCATTGGCGAGTCGCCAGTCaa > 3:194988/1‑148 (MQ=255) aaCCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTACTTGTGTGGGGATTTTTTTTCGTGCCTAGAAAATGAATACACTCGCCCAAACGACCAAGATAGATGCCGTAAACATCATGATCAATACCATTGGCGAGTAGCCAGTCAAc > 3:105636/1‑149 (MQ=255) accaccAACCTAGCCTCACTCAAGGACTTCCTTTTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCGTAAACATCATGCTCAATACCATTGGCTAGTCGCCAGTCAACTCCCTGgat < 7:56787/149‑1 (MQ=255) caccaACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTATAAAATGACGACACTCGCCCAAAGGACCGAGCTATATGCCGTAAACATCATGCTCAATACCATTGGCGACTCGCCaatg < 5:263027/135‑4 (MQ=255) caccaACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCGTAAACATCATGCTCAATACCATTGGCGAGTCGCCAGTCAACTCCCt < 4:293403/143‑1 (MQ=255) caccaACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCGTAAACATCATGCTCAATACCATTGGCGAGTCGCCAGTCAACTCCCt > 3:293403/1‑143 (MQ=255) caccaACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGAGTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGCCCGAGCTAGATGCCGTAAACATCAAGCTCAATACCATTGCCTACTCGCCaatg > 6:263027/1‑132 (MQ=255) ccaACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCGTAAACATCATGCTCAATACCATTGGCGAGTCGCCAGTCAACTCCCTGGatgatg > 2:334577/1‑149 (MQ=255) aaaaaaaaGCCCCACACAAGGAAGTCCTTGAGTGAGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCGTAAACATCATGCTCAATACCATTGGCGAGTCGCCAGTCAACTCCCTGGatgatg < 2:223821/142‑1 (MQ=38) caACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCGTAAACATCATGCTCAATACCATTGGCGAGTCGCCAGTCAACTCCCTGGATGATgg < 5:183489/149‑1 (MQ=255) ccTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCGTAAACATCATGCTCAATa < 6:172331/109‑1 (MQ=255) ccTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCGTAAACATCATGCTCAATa > 5:172331/1‑109 (MQ=255) gCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCGTAAACATCATGCTCAATACCATTGGCGAGTCGCCAGTCAACTCCCTGGATGATGGCCTTccc < 8:21320/149‑1 (MQ=255) ctcactcaAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCGTAAACATCATGCTCAATACCATTGGCGAGTCGCCAGTCAACTCCCTGGATGATGGCCTTc < 2:341390/145‑1 (MQ=255) ctcactcaAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCGTAAACATCATGCTCAATACCATTGGCGAGTCGCCAGTCAACTCCCTGGATGATGGCCTTc > 1:341390/1‑145 (MQ=255) ctcactcaAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCGTAAACATCATGCTCAATACCATTGGCGAGTCGCCAGTCAACTCCCTGGATGATGGCCTTCCCGt < 6:122345/149‑1 (MQ=255) ccacacaAGGAAGTCCTTGAGTGGGGCTTTTTTTTCGTGCCTAGAAAATGaa < 8:200673/51‑1 (MQ=18) ccacacaAGGAAGTCCTTGAGTGGGGCTTTTTTTTCGTGCATAGAAAATGaa > 7:200673/2‑52 (MQ=18) aaGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCGTAAACATCATGCTCAATACCATTGGCGAGTCGCCAGTCAACTCCCTGGATGATGGCCTTCCCGTAGCGGAt > 8:187403/1‑149 (MQ=255) aaGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCGTAAACATCATGCTCAATACCATTGGCGAGTCGCCAGTCAACTCCCTGGATGATGGCCTTCCCGTAGCGGAt > 1:201781/1‑149 (MQ=255) cTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCGTAAACATCATGCTCAATACCATTCGCGAGTCGCCAGTCAACTCCCTGGATGATCGCCTTCCCGTAGCGGATgccgc > 8:107833/1‑149 (MQ=255) | CTGGCGATGGAGTCGGACTACGACATCCGCCGTCAAGGCACCCTCAT‑GGTCGCCAAGTACGCCATGGGCCACGGCATCCTCCGCCCAGCAGCCGCTGTAGAGCTGAAAACCGCCTAACCACCAACCTAGCCTCACTCAAGGACTTCCTTGTGTGGGGCTTTTTTTTCGTGCCTAGAAAATGAAGACACTCGCCCAAACGACCGAGCTAGATGCCGTAAACATCATGCTCAATACCATTGGCGAGTCGCCAGTCAACTCCCTGGATGATGGCCTTCCCGTAGCGGATGCCGC > NC_002947/2604722‑2605012 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |