| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,630,168 | A→G | 5.1% | A375A (GCA→GCG) | clpX → | ATP‑dependent Clp protease ATP‑binding subunit ClpX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,630,168 | 0 | A | G | 5.1% | 293.2 / 4.1 | 97 | A375A (GCA→GCG) | clpX | ATP‑dependent Clp protease ATP‑binding subunit ClpX |
| Reads supporting (aligned to +/- strand): ref base A (50/42); new base G (3/2); total (53/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.72e-01 | |||||||||||
GCTACCCTTGACGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAGGGCACCTCG > NC_002947/2630025‑2630312 | gCTACCCTTGACGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGATAGAATGCGCTGACCAAGCAGTATGCAAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGc > 1:287789/1‑148 (MQ=255)gCTACCCTTGACGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGc < 1:198091/147‑1 (MQ=255) tACCCTTGACGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCCAGGGCCTTGCGTGCaacg > 2:191718/1‑147 (MQ=255) tACCCTTGACGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAgg > 1:67461/1‑149 (MQ=255) cccTTGACGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAgg < 8:141252/147‑1 (MQ=255) ccTTGACGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGccc > 2:176603/1‑149 (MQ=255) cTTGACGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCt < 6:250633/149‑1 (MQ=255) gACGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTg > 5:114085/1‑147 (MQ=255) aCGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCCAGGGCCTTGCGTGCAACGGCCTTGAg < 1:191718/149‑1 (MQ=255) aCGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGa < 7:185183/148‑1 (MQ=255) aCGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGa < 8:12125/148‑1 (MQ=255) cGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCCAGGGCCTTGCGTGCAACGGCCTTGAgc < 6:54625/149‑1 (MQ=38) ggATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGa > 2:132434/1‑149 (MQ=255) gATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGa < 1:176603/148‑1 (MQ=255) gATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGAc > 6:7632/1‑149 (MQ=255) aTGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACt > 7:144338/1‑149 (MQ=255) tGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTg < 1:204610/149‑1 (MQ=255) gAGGCTGCGTTGATGCAGATCCTCACCGAGCCGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAAATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAg < 7:343049/129‑1 (MQ=255) gTTGATGCAGATCCTCACCGAGCCGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTg < 3:354575/149‑1 (MQ=255) aTGCAGATCCTCACCGAGCCGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCt < 5:348437/149‑1 (MQ=255) aTGCAGATCCTCACCGAGCCGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCt > 6:107628/1‑149 (MQ=255) gATCCTCACCGAGCCGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGtt < 1:132434/149‑1 (MQ=255) gATCCTCACCGAGCCGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGtt < 6:114085/149‑1 (MQ=255) cTCACCGAGCCGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGAt < 6:352882/149‑1 (MQ=255) cACCGAGCCGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATcc > 6:218499/1‑149 (MQ=255) gAGCCGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCg > 3:189522/1‑148 (MQ=255) aGCCGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGaa < 5:7632/149‑1 (MQ=255) cGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGaa < 7:307409/146‑1 (MQ=255) cGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGaa > 8:307409/1‑146 (MQ=255) ga‑agaaTGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCg > 1:169940/1‑149 (MQ=255) ga‑agaaTGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCg < 5:107628/149‑1 (MQ=255) ga‑agaaTGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCg > 8:320429/1‑149 (MQ=255) agaaTGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCgtg < 8:144338/149‑1 (MQ=255) gaaTGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGtt < 6:160255/131‑1 (MQ=255) gaaTGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGtt > 5:160255/1‑131 (MQ=255) aaTGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGtt < 5:94286/149‑1 (MQ=255) aTGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGgc < 7:5267/113‑1 (MQ=255) aTGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGgc > 8:5267/1‑113 (MQ=255) tGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGc > 7:305778/1‑93 (MQ=255) tGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGc < 8:305778/93‑1 (MQ=255) tGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGAACTCGAGTTCCGCAGCGAAGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTAGCTAGa > 1:256749/1‑148 (MQ=255) aCCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGAt < 1:182284/147‑1 (MQ=255) cAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCgtg < 2:45802/136‑1 (MQ=255) cAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCgtg > 1:45802/1‑136 (MQ=255) aaGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGAACTAGAGTTCCGCAGAGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAATACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCAt > 3:360399/1‑149 (MQ=255) gTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTAt > 7:56638/1‑148 (MQ=255) gCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTAt > 1:305732/1‑144 (MQ=255) ccAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTg > 2:342380/1‑77 (MQ=255) ccAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTg < 1:342380/77‑1 (MQ=255) cAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATgaga < 3:192160/146‑1 (MQ=255) cAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATgaga > 4:192160/1‑146 (MQ=255) cAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATcc > 1:6357/1‑149 (MQ=255) gCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCtt > 6:113284/1‑149 (MQ=255) gTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATgaga > 6:233002/1‑140 (MQ=255) gTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATgaga > 2:56832/1‑140 (MQ=255) gTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATgaga < 5:233002/140‑1 (MQ=255) gTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATgaga < 1:56832/140‑1 (MQ=255) tCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAgcgc > 6:161069/1‑74 (MQ=255) tCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAgcgc < 5:161069/74‑1 (MQ=255) gagaTGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGaaaaa < 7:320429/149‑1 (MQ=255) gaTGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAgg < 2:305732/149‑1 (MQ=255) tGGAAAGCGTCGACCTCGAGTTCCGCAGCGATTCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTAt < 8:145831/128‑1 (MQ=255) tGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCg < 2:128461/140‑1 (MQ=255) tGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCg > 1:128461/1‑140 (MQ=255) ggAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGTGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATg > 7:70026/1‑149 (MQ=255) ggAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCg > 8:60786/1‑90 (MQ=255) ggAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCg < 7:60786/90‑1 (MQ=255) ggAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATg > 4:23737/1‑149 (MQ=255) gAAAGCGTCGACCTCGACTTCCGCAGCGAAGAGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCTAAAGACTCGCGCTCCTGGCCTCCGTTCGATCCACGAAGGCGAGTTCGTCGATACCATGTATGCGATCCCTTCGAAAAAGGATGt > 6:273494/1‑149 (MQ=255) aaaGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTAt > 7:205592/1‑125 (MQ=255) aaaGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTAt < 8:205592/125‑1 (MQ=255) gTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTcggggg > 1:316439/1‑144 (MQ=255) cTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGAAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAggtggt > 1:272133/1‑149 (MQ=255) cGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAggtg < 4:6837/145‑1 (MQ=255) cGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAggtg > 3:6837/1‑145 (MQ=255) gTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATc > 7:30698/1‑148 (MQ=255) ccGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCGCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATcgac < 8:56638/148‑1 (MQ=255) gCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCTAGGTGGTTATcgac > 2:357116/1‑146 (MQ=255) ttGCGCTCCAGGGCCTTGCGTGCAACGGCCTTGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGt > 7:195360/2‑148 (MQ=38) cgcTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGTGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCAtt < 8:70026/149‑1 (MQ=255) gcTCCAGGGCCTTGCGTGCAACGGCCTTGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCAtt > 5:160681/1‑148 (MQ=38) gcTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCAtt > 1:270423/1‑148 (MQ=255) cTCAAGGCCGTTGCACGCAATGCCCTGGAGAGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTAGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCATCAAGGTGGTTATCGACGAGAGCGTCATTGa < 4:360399/149‑1 (MQ=255) tCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAg > 3:197662/1‑149 (MQ=255) aaGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCa > 3:235296/1‑85 (MQ=255) aaGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCa < 4:235296/85‑1 (MQ=255) aaGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAggg > 5:224234/1‑149 (MQ=255) aaGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAggg > 4:85921/1‑149 (MQ=255) aaGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAg < 2:67461/147‑1 (MQ=255) aaGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTCGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAggg > 8:37066/1‑149 (MQ=255) ggCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAGGGCa > 1:8497/1‑149 (MQ=255) gCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTAt < 2:34777/125‑1 (MQ=255) gCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTAt > 1:34777/1‑125 (MQ=255) gCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAGGGCAc > 8:193504/1‑149 (MQ=255) gCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAGGGCAc > 1:361264/1‑149 (MQ=255) gTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTGAGCAAGGTGGTTATCGACGAGAGCGTCATTGAGGGCACCTc > 5:320487/1‑149 (MQ=255) ttGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAGGGCACCTCg < 5:113284/149‑1 (MQ=255) | GCTACCCTTGACGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGA‑AGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAGGGCACCTCG > NC_002947/2630025‑2630312 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |