| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,675,166 | T→G | 5.3% | P323P (CCA→CCC) | PP_2344 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,675,166 | 0 | T | G | 5.3% | 244.5 / 3.9 | 75 | P323P (CCA→CCC) | PP_2344 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (31/40); new base G (2/2); total (33/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 | |||||||||||
CAAGCTTTTCAATCAACGATAGGCTTGTGACATGACGCTACAAGGCTTGCAGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTGCGGCGAAGGCGTCATCAGCAGCACGTTTTGCAGGCGGGTGGCATCGCCCTTGCGCCAGGGCAGGGCCTTG > NC_002947/2675018‑2675310 | cAAGCTTTTCAATCAACCATAGGCTTGTGACATGACGCTACAAGGCTTGCAGGCGTTCATGCACCCGCCCGGTCGCGGTCAGTTCCAGAAGTTCATCCCACAGGAGCTCGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCt > 6:302673/1‑149 (MQ=255) gCTTTTCAATCAACGATAGGCTTGTGACATGACGCTACAAGGCTTGCAGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGgc < 6:319671/149‑1 (MQ=255) ttttCAATCAACGATAGGCTTGTGACATGACGCTACAAGGCTTGCAGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGgcg > 7:219934/1‑148 (MQ=255) aatcaaCGATAGGCTTGTGACATGACGCTACAAGGCTTGCAGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGc > 3:265162/1‑149 (MQ=255) tcaaCGATAGGCTTGTGACATGACGCTACAAGGCTTGCGGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGcc > 5:57351/1‑148 (MQ=255) tcaaCGATAGGCTTGTGACATGACGCTACAAGGCTTGCAGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGcc > 5:250628/1‑148 (MQ=255) gCTTGTGACATGACGCTACAAGGCTTGCAGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCAGCCCCCAGGCGCTGGCTTTCAGCAATGGCTTAGTACCAATAGCGCTTGCGCCCTGGAGCATCGCCCATGAAGCGCt > 7:63398/1‑149 (MQ=255) cTTGTGACATGACGCTACAAGGCTTGCAGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCtt < 7:104112/149‑1 (MQ=255) cTTGTGACATGACGCTACAAGGCTTGCAGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCtt < 5:219059/149‑1 (MQ=255) ttGTGACATGACGCTACAAGGCTTGCAGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCAGGgcgc > 4:97273/1‑130 (MQ=255) ttGTGACATGACGCTACAAGGCTTGCAGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCAGGgcgc < 3:97273/130‑1 (MQ=255) gtgACATGACGCTACAAGGCTTGCAGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATc < 4:44356/131‑1 (MQ=255) gtgACATGACGCTACAAGGCTTGCAGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATc > 3:44356/1‑131 (MQ=255) gtgACATGACGCTACAAGGCTTGCAGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTg > 6:219123/1‑147 (MQ=255) tgACATGACGCTACAAGGCTTGCAGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAg < 5:219123/149‑1 (MQ=255) aCGCTACAAGGCTTGCAGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGAGCTTGAAGTCGTTGc > 8:308031/1‑149 (MQ=255) cGCTACAAGGCTTGCAGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCg > 8:67856/1‑149 (MQ=255) gCTACAAGGCTTGCGGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCgg < 6:57351/149‑1 (MQ=255) tACAAGGCTTGCAGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTc > 5:304660/1‑140 (MQ=255) tACAAGGCTTGCAGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTc < 6:304660/140‑1 (MQ=255) tACAAGGCTTGCAGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTc > 2:312135/1‑149 (MQ=255) tACAAGGCTTGCAGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTc > 5:352554/1‑149 (MQ=255) aaGGCTTGCAGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCggg < 7:67856/149‑1 (MQ=255) ggCTTGCAGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCggg > 6:81570/1‑147 (MQ=255) ggCTTGCAGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCggg > 5:19074/1‑147 (MQ=255) gaGGCGTTGATTCAGGCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCGCCCAGGCTCTGGCTTTCATCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTTAAGTCGTTGCGGTCGGGCAGTTTg < 5:302673/147‑1 (MQ=255) cAGGCGTTCATGCAGCCGCCCGGTGGCTGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTg < 7:25980/148‑1 (MQ=255) cAGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTg < 4:265162/148‑1 (MQ=255) aGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGcc < 6:250628/149‑1 (MQ=255) aGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGcc > 6:238589/1‑149 (MQ=255) cGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTa < 2:245491/149‑1 (MQ=255) gTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGttt < 3:221521/142‑1 (MQ=255) gTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGttt > 4:221521/1‑142 (MQ=255) gTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTag < 8:219934/149‑1 (MQ=255) gCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCt < 1:191475/89‑1 (MQ=255) gCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCt > 2:191475/1‑89 (MQ=255) gccCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGggcggc > 4:259908/1‑148 (MQ=255) gccCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCAGGGCGCaagc > 6:142507/1‑89 (MQ=255) gccCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCAGGGCGCaagc < 5:142507/92‑4 (MQ=255) ccGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCACTAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAg < 2:285273/149‑1 (MQ=255) cGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCa < 7:283167/123‑1 (MQ=255) cGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCa > 8:283167/1‑123 (MQ=255) gTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTa < 6:352554/149‑1 (MQ=255) gTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTgcgg > 1:228938/1‑149 (MQ=255) gTTCCAGAAGTTCATGCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTGCGGCGaa < 1:312135/149‑1 (MQ=255) ttCCTGACGTTCAGCCCCCAGGCGCTGGCTTTCTGCAATGGCTTTGTACCAATAGAGGTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTGCGGCGAAg < 8:63398/149‑1 (MQ=255) cAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTGCGGCGAAGGc < 3:259908/148‑1 (MQ=255) aaGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTATGCCGTAGGGCAGGGCGGCCAg < 7:237037/129‑1 (MQ=255) cATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTGCGGCGAAGGCGTCATcag > 8:227470/1‑148 (MQ=255) aTCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTag > 2:188709/1‑109 (MQ=255) aTCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTag < 1:188709/109‑1 (MQ=255) aTCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTGCGGCGAAGGCGTCATcagca < 2:211869/149‑1 (MQ=255) aTCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTGCGGCGAAGGCGTCATcagca < 5:81570/149‑1 (MQ=255) ccccAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTGCGGCGAAGGCGTCATCagcagc < 7:227470/148‑1 (MQ=255) tGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTgcgg < 4:30081/119‑1 (MQ=255) tGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTgcgg > 3:30081/1‑119 (MQ=255) tGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTGCGGCGAAGGCGTCATCAGCAGCACGTTTTGCAg > 4:105086/1‑149 (MQ=255) tGGCTTTCAGCAATGGCTTTGTACCAATAGCGATTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTGCGGCGAAGGCGTCATCAGCAGCACGTTTTGCAg > 1:42974/1‑149 (MQ=255) tttCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTg < 1:176290/86‑1 (MQ=255) tttCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTg > 2:176290/1‑86 (MQ=255) cAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTGCGGCGAAGGCGTCATCAGCAGCACGTTTTGCAGGCGGGt < 5:238589/148‑1 (MQ=255) aGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTGCGGCGAAGGCGTCATCAGCAGCACGTTTTGCAGGCGGGTgg < 2:58634/149‑1 (MQ=255) gCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTGCGGCGAAGGCGTCATCAGCAGCACGTTTTGCAg < 3:182131/134‑1 (MQ=255) gCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTGCGGCGAAGGCGTCATCAGCAGCACGTTTTGCAg > 4:182131/1‑134 (MQ=255) gCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTGCGGCGAAGGCGTCATCAGCAGCACGTTTTGCAGGCGGGTGGCATCGc < 2:42974/148‑1 (MQ=255) cTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTGCGGCGAAGGCGtcatca > 2:310703/1‑117 (MQ=255) cTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTGCGGCGAAGGCGtcatca < 1:310703/117‑1 (MQ=255) cTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTGCGGCGAAGGCGGCATCAGCAGCACGTTTTGCAGGCGGGTGGCAGCGccc < 3:121410/149‑1 (MQ=255) gTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTGCGGCGAAGGCGTCATCAGCAGCACGTTTTGCAGGCGGGTGGCATCGCCCTTg < 6:19074/148‑1 (MQ=255) ccAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTGCGGCGAAGGCGTCATCAGCAGCACGTTTTGCAGGCGGGTGGCATCGCCCTTgcgc > 3:252692/1‑148 (MQ=255) cAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTgcgg > 1:284544/1‑95 (MQ=255) cAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTgcgg < 2:284544/95‑1 (MQ=255) cAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTGCGGCGAAGGCGTCATCAGCAGCACGTTTTGCAGGCGGGTGGCATCGCCCTTgcgc > 4:279758/1‑147 (MQ=255) cAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTGCGGCGAAGGCGTCATCAGCAGCACGTTTTGCAGGCGGGTGGCATCGCCCTTgcgc < 3:279758/147‑1 (MQ=255) aaTAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTGCGGCGAAGGCGTCATCAGCAGCACGTTTTGCAGGCGGGTGGCATCGCCCTTGCGCcag < 4:252692/149‑1 (MQ=255) ttGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTGCGGCGAAGGCGTCATCAGCAGCACGTTTTGCAGGCGGGTGGCAt < 6:213813/127‑1 (MQ=255) cgcCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTGCGGCGAAGGCGTCATCAGCAGCACGTTTTGCAGGCGGGTGGCATCGCCCTTGCGCCAGGGCAGGGCCtt < 2:228938/149‑1 (MQ=255) gcCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTGCGGCGAAGGCGTCATCAGCAGCACGTTTTGCAGGCGGGTGGCATCGCCCTTGCGCCAGGGCAGGGCCTTg > 2:77699/1‑149 (MQ=255) | CAAGCTTTTCAATCAACGATAGGCTTGTGACATGACGCTACAAGGCTTGCAGGCGTTCATGCAGCCGCCCGGTGGCGGTCAGTTCCAGAAGTTCATCCCCCAGGCGCTGGCTTTCAGCAATGGCTTTGTACCAATAGCGCTTGCGCCCTGGCGCATCGCCCATGAAGCGCTTGAAGTCGTTGCGGTCGGGCAGTTTGCCGTAGGGCAGGGCGGCCAGGTATTGCGGCGAAGGCGTCATCAGCAGCACGTTTTGCAGGCGGGTGGCATCGCCCTTGCGCCAGGGCAGGGCCTTG > NC_002947/2675018‑2675310 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |