| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 268,746 | G→C | 11.4% | intergenic (‑77/+23) | PP_0216 ← / ← desA | sensory box/GGDEF family protein/delta‑9 fatty acid desaturase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 268,746 | 0 | G | C | 11.4% | 195.4 / 14.2 | 70 | intergenic (‑77/+23) | PP_0216/desA | sensory box/GGDEF family protein/delta‑9 fatty acid desaturase |
| Reads supporting (aligned to +/- strand): ref base G (31/30); new base C (4/4); total (35/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.41e-01 | |||||||||||
GGGAAAATCGTTGGAATGTTCTTGGCCATGTGCACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGCGAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTACCCAGTCTTTCATGGCTGCCAGCATGTCGTGG > NC_002947/268599‑268889 | gggAAAATCGTTGGAATGTTCTTGGCCATGTGCACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTggg > 3:212777/1‑149 (MQ=255) aaTCGTTGGAATGTTCTTGGCCATGTGCACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCCCAGCGGGGCg > 5:378575/1‑149 (MQ=255) aTCGTTGGAATGTTCTTGGCCATGTGCACGGAGCAGGGCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCAAATGGCACGCCCCCCAGCGGGGCGt < 6:373803/149‑1 (MQ=255) gAATGTTCTTGGCCATGTGCACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGc < 3:171409/140‑1 (MQ=255) gAATGTTCTTGGCCATGTGCACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGc > 4:171409/1‑140 (MQ=255) gAATGTTCTTGGCCATGTGCACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCCCAGCGGGGCGTGccatt < 6:378575/148‑4 (MQ=255) tCTTGGCCATGTGCACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAAcggc > 6:331296/1‑149 (MQ=255) cTTGGCCATGTGCACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAAcggc < 1:306303/148‑1 (MQ=255) cTTGGCCATGTGCACGGAGCACGTCTCAACGAGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCAGGGGGGCGTGCCGATCAAcggcg > 2:90725/1‑149 (MQ=255) ggCCATGTGCACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGACGTGCCGATCAAcggcg < 3:124820/146‑1 (MQ=255) cATGTGCACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAgg > 2:131145/1‑149 (MQ=255) aTGTGCACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCTGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGGTGTGGGGCGTGCCGATCAACGGCTGTCAgga < 7:354228/149‑2 (MQ=255) cACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCg < 7:99407/148‑1 (MQ=255) aCGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCCCAGCGGGGCGTGccattc < 5:311709/129‑5 (MQ=255) aCGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCCCAGCGGGGCGTGccattc > 6:311709/1‑125 (MQ=255) cAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGgcg > 7:161806/1‑149 (MQ=255) cAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGgcg > 4:38854/1‑149 (MQ=255) aGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGgcg > 3:44567/1‑148 (MQ=255) ggTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCa < 5:335545/149‑1 (MQ=255) gTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAg > 4:179146/1‑149 (MQ=255) tcAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACTC‑AGGCGATATTCAGTATTCGAGTGGAGAGGTGGGTGCGAAGTTCCGAATGGCACGCCACGCTGGGTGGCGTGCCTATCAACCGCGGTCAGGC‑GCCgg > 4:49889/1‑136 (MQ=255) tcAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCgg < 3:49889/136‑1 (MQ=255) atcGTGATAGCGTGCGGGCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCTAGt < 2:252076/147‑1 (MQ=255) aCGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGt > 3:341603/1‑148 (MQ=255) gTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCTAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGt > 1:243044/1‑147 (MQ=255) tGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGt > 7:202341/1‑149 (MQ=255) gCGTGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGa < 4:223983/149‑1 (MQ=255) gCGTGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGa < 5:331296/149‑1 (MQ=255) cGTGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAg < 8:161806/149‑1 (MQ=255) tGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGtt < 4:212777/149‑1 (MQ=255) cGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTtgt > 8:194246/1‑149 (MQ=255) ccAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGtgct < 8:202341/149‑1 (MQ=255) cAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGCCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGtgctg > 5:205928/1‑149 (MQ=255) cAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCGGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGtgctg > 3:331650/1‑149 (MQ=255) aGCATCCGGCCCGCCACGG‑ATGCGATATTCCGGTTTCGAGTGGAGAGGTGGGGGCGAAGTTCCGTATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGtgctgc < 7:300093/149‑1 (MQ=255) ccGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCAGCCGGTCGGGCGCAGCGAGTAAGTCTTGa < 1:28234/135‑1 (MQ=255) ccGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGa > 2:28234/1‑134 (MQ=255) cGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGCGAAGTc > 2:158040/1‑149 (MQ=255) gCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGCGAAGTcgc < 4:44567/149‑1 (MQ=255) ccGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGCGAAGTcgcg > 7:74300/1‑148 (MQ=255) gC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATAGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGCGAAGTCGCGCAGTGCCt > 1:92546/1‑149 (MQ=255) aGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGCGAAGTCGCGCAGTGCCTg > 2:116796/1‑148 (MQ=255) ttCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGCGAAGTCGCGCAGTGCCTGGATGCCGc < 2:243044/148‑1 (MQ=255) ccGGTTTCGAGTGGATAGGTGGGGGCGATGTTCCGTATGGCAGGCCCCGCTGGGGGGCTTGCCGATCAACGGCGGTGAGGC‑GCCGGTGGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGCGAAGTCTCGCAGTGCCTGGATGCCGCtt < 4:324161/148‑2 (MQ=255) ccGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGCGAAGTCGCGCAGTGCCTGGATGCCGCTg < 4:341603/148‑1 (MQ=255) ttCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGCGAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCg < 3:179146/149‑1 (MQ=255) gAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGTGCAGCGAGTAAGTCTTGAGTTGTGCTGCGAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGc > 7:97844/1‑148 (MQ=255) aGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGTGTTGTGCTGCGAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGcc < 1:90725/148‑1 (MQ=255) tGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCtt > 8:211574/1‑97 (MQ=255) tGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCtt < 7:211574/97‑1 (MQ=255) ggAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGAGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGCGAAGTCGCGCAGTGCCTGGATGCCGGAGGTTTCGGCCTCAt > 6:369138/1‑149 (MQ=255) agGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGCGAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTAc < 1:158040/149‑1 (MQ=255) gTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGCGaa > 7:324425/1‑105 (MQ=255) gTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGCGaa < 8:324425/105‑1 (MQ=255) gTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGCGAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTAcc > 6:141046/1‑148 (MQ=255) gTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGCGAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTAcc > 3:246359/1‑148 (MQ=255) gggggCGAAGTTCCGAATGGCACGCCCGGCGGGGTGGCGTGCCGATCAACGGCGGTCAGGG‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGCGAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTACCCAg < 2:191398/149‑1 (MQ=255) cGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGCGAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTACCCAGTCttt < 1:131145/149‑1 (MQ=255) gAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCACGC‑GCCGGACGGGCGCAGCGAGAAAGTCGTGAGTTGTGCTGAGAAGTCGCGCAGTGCCTGGATGCCGCTGGTGTCGGCCTCATGTACCCAGTCttt > 5:80959/1‑148 (MQ=255) ttCCGAATGGCACGGCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGTGCAGCGAGTAAGTCTTGAGTTGTGCTGCGAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTACCCAGTCTTTCATg < 8:97844/148‑1 (MQ=255) ccGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGCGAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTAcc > 6:249745/1‑134 (MQ=255) ccGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGCGAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTAcc < 5:249745/134‑1 (MQ=255) gAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGCGAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTACCCAGTCTTTCATGGCTGc < 3:38854/149‑1 (MQ=255) tGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGCGAAGTCGCGCAGTGCCTGGAAGCCGCTGGTTTCGGCCTCATGTACCCAGTCTTTCATGGCTGCCAg < 1:261171/149‑1 (MQ=255) ggCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGCGAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTACCCAGTCTTTCATGGCTGCCAg > 2:335524/1‑148 (MQ=255) gCACGCCCCCCAGCGGGGCGTGCCGATCAACGGCTGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGCGAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTACCCAGTCTTTCATGGCTGCCAGCa > 2:85599/1‑149 (MQ=255) cACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGCGAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTACCCAGTCTTTCATGGCTGCCAGCAt > 3:222912/1‑149 (MQ=255) aCGCCCCCCAGCGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGtgct > 2:145147/1‑77 (MQ=39) aCGCCCCCCAGCGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGtgct < 1:145147/77‑1 (MQ=39) cccGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGCGAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTACCCAGTCTTTCATGGCTGCCAGCATGTCGt < 1:256862/149‑1 (MQ=255) cGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGCGAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTACCCAGTCTTTCATGGCTGCCAGCATGTCGTgg > 8:193240/1‑149 (MQ=255) | GGGAAAATCGTTGGAATGTTCTTGGCCATGTGCACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGC‑AGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGC‑GCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGCGAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTACCCAGTCTTTCATGGCTGCCAGCATGTCGTGG > NC_002947/268599‑268889 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |