| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,841,935 | T→A | 6.5% | intergenic (‑114/+138) | yqhD ← / ← PP_2493 | NAD(P)‑dependent alcohol dehydrogenase/RadC family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,841,935 | 0 | T | A | 6.5% | 238.5 / 5.0 | 77 | intergenic (‑114/+138) | yqhD/PP_2493 | NAD(P)‑dependent alcohol dehydrogenase/RadC family protein |
| Reads supporting (aligned to +/- strand): ref base T (35/37); new base A (2/3); total (37/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.21e-01 | |||||||||||
CGCGTGGGGTTGTGGAAGTCAAAATTGAGCATAGATTTCTCTACTCCTTAAAAGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCCGCGCGATGTCGAGGGTTGTTGCTAGGCACTGATGATAGGGCATCGGGAGTCATAGGTTTA > NC_002947/2841790‑2842083 | cgcgTGGGGTTGTGGAAGTCAAAATTGAGCATAGATTTCTCTACTCCTTAAAAGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCTCCAAATAGCTGAAGATTGGTTAGAAgcttg < 5:120757/148‑1 (MQ=255) ggggTTGTGGAAGTCAAAATTGAGCATAGATTTCTCTACTCCTTAAAAGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCt > 1:341713/1‑148 (MQ=255) ggggTTGTGGAAGTCAAAATTGAGCATAGATTTCTCTACTCCTTAAAAGTAGACCAGTAGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCt > 6:291292/1‑148 (MQ=255) gTTGTGGAAGTCAAAATTGAGCATAGATTTCTCTACTCCTTAAAAGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAg < 6:300374/149‑1 (MQ=255) ggAAGTCAAAATTGAGCATAGATTTCTCTACTCCTTAAAAGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCAAGCTTCTaaccaatc < 7:344832/148‑7 (MQ=255) tCAAAATTGAGCATAGATTTCTCTACTCCTTAAAAGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGt > 3:122394/1‑149 (MQ=255) aaaaTTGAGCATAGATTTCTCTACTCCTTAAAAGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTg > 3:312068/1‑149 (MQ=255) aaaaTTGAGCATAGATTTCTCTACTCCTTAAAAGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTg > 3:38639/1‑149 (MQ=255) aaaTTGAGCATAGATTTCTCTACTCCTTAAAAGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTgg < 4:179007/149‑1 (MQ=255) aaTTGAGCATAGATTTCTCTACTCCTTAAAAGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGt < 8:332107/145‑1 (MQ=255) aaTTGAGCATAGATTTCTCTACTCCTTAAAAGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGt > 7:332107/1‑145 (MQ=255) aaTTGAGCATAGATTTCTCTACTCCTTAAAAGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGgt < 1:316141/149‑1 (MQ=255) ttGAGCATAGATTTCTCTACTCCTTAAAAGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGgtgt < 2:356957/149‑1 (MQ=255) gCATAGATTTCTCTACTCCTTAAAAGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCa > 5:152447/1‑149 (MQ=255) gCATAGATTTCTCTACTCCTTAAAAGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCa > 1:23160/1‑149 (MQ=255) cATAGATTTCTCTACTCCTTAAAAGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCAt > 3:309969/1‑149 (MQ=255) atatatTTCTCTACTCCTTAAATGTAGAAGAGTCGTATATTTTTTGGT‑TAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCAtt < 4:42995/149‑1 (MQ=255) aTAGATTTCTCTACTCCTTAAAAGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACAAAATATCTTAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCAtt > 5:323412/1‑149 (MQ=255) aGATTTCTCTACTCCTTAAAAGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCg > 3:214898/1‑149 (MQ=255) ctctACTCCTTAAAAGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGAGCAACAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCa > 8:27229/1‑149 (MQ=255) aCTCCTTAAAAGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTcc > 7:328467/1‑149 (MQ=255) cTCCTTAAAAGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTcc < 3:84094/148‑1 (MQ=255) tCCTTAAAAGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTg < 4:312068/149‑1 (MQ=255) cTTAAAAGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTg < 2:23160/147‑1 (MQ=255) cTTAAAAGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGt > 5:154145/1‑149 (MQ=255) ttAAAAGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTc > 7:117766/1‑149 (MQ=255) tAAAAGTAGACCAGTCGTATATTTTTTGGTAGAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTc > 1:32504/1‑149 (MQ=255) tAAAAGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTAGTCTGCATTCCTGGTcc > 3:126180/1‑149 (MQ=255) aaGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTccc > 3:358448/1‑147 (MQ=255) aaGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGa < 6:152447/149‑1 (MQ=255) gTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGc < 6:171354/149‑1 (MQ=255) ccAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAg < 2:341713/149‑1 (MQ=255) ccAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCAAGCTTCTaac < 2:148344/98‑2 (MQ=255) ccAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCAAGCTTCTaac > 1:148344/1‑97 (MQ=255) gTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCg > 3:142003/1‑149 (MQ=255) tCGTATATTTTTTGGA‑GAAATTTTTATTGCAGAAGCTCGTCGCCGCGCATTGCGCACCAAATAGCTGAAGATTCGTTAGAAGCTTGCTTCTAAAGGCAACAAAGTTGGTGTGGAATTCGTCTGCATAACTGGTCACGAGCC‑AAAGGcct > 4:262809/1‑147 (MQ=255) gTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTg > 2:87278/1‑149 (MQ=255) tttGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAag > 8:351219/1‑149 (MQ=255) gT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAagcagc > 3:77783/1‑149 (MQ=255) t‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAagcagc < 5:291292/148‑1 (MQ=255) t‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCg > 5:204863/1‑149 (MQ=255) aaTTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTa < 2:32504/148‑1 (MQ=255) aTTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAg > 7:76648/1‑149 (MQ=255) ttttATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCGACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCt > 5:162665/1‑149 (MQ=255) ttATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCGACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTc < 6:162665/148‑1 (MQ=255) aTTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCcgc > 5:248103/1‑149 (MQ=255) ttGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCcgc < 4:214898/148‑1 (MQ=255) cAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTaa > 6:121279/1‑138 (MQ=255) cAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTaa < 5:121279/138‑1 (MQ=255) gCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAgg < 7:179738/112‑1 (MQ=255) gCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAgg > 8:179738/1‑112 (MQ=255) cTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCCGCGCGATGTCGa < 4:358448/149‑1 (MQ=255) cTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCCGCGCGATGTCGa < 7:351219/149‑1 (MQ=255) tcgtcgGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCAGCGCGATGTCGAg > 7:139400/1‑149 (MQ=255) gtcgGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAGCCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCCGCGCGATGTCGAggg > 1:29663/1‑149 (MQ=255) gtcgGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCCGCGCGATGTCGAggg < 4:309969/149‑1 (MQ=255) tcgGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCCGCGCGATGTCGAGGgt < 6:248103/149‑1 (MQ=255) cgcgcATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTTGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCCAAAAGGCGTTGCCGCCAAGCAGCGTAAGCTCCGCGCGATGTCGAGGgttgt < 1:87278/149‑1 (MQ=255) cgcgcATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCCGCGCGATGTCGAGGgttgtt < 8:180247/149‑1 (MQ=255) gcgcATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCCGCGCGATGTCGAGGGttgttg < 2:29663/149‑1 (MQ=255) cgcATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCCGCGCGATGTCGAGGGTTGTTGc < 3:262809/149‑1 (MQ=255) gcATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCCGCGCGATGTCGAgg < 1:330729/140‑1 (MQ=255) gcATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCCGCGCGATGTCGAgg > 2:330729/1‑140 (MQ=255) gcATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCCGCGCGATGTCGAGGGTTGTTGCt < 4:77783/149‑1 (MQ=255) cATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCCGCGCGATGTCGAGGGTTGTTGCTa < 6:154145/149‑1 (MQ=255) cATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCCGCGCGATGTCGAGGGGTGTTGCTa < 4:38639/149‑1 (MQ=255) aTTGCGCAGCAATTAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAAGCAAGTTGGTGTGGCATTCGGCTGCATTCCTGGTCGCGAGCC‑AAAGGCGTTGCCGCGAAGCAGCGTAATCTCCGCGCGATGTGGTGGGTTGTTGCTAg < 3:55671/149‑1 (MQ=255) aTTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCCGCGCGATGTCGAGGgttgt < 4:212973/143‑1 (MQ=255) aTTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCCGCGCGATGTCGAGGgttgt > 3:212973/1‑143 (MQ=255) ttGCGCACCAAATAGCTGAAGATTGGTTAGAAGCAAGCTTc < 7:18686/41‑1 (MQ=255) ttGCGCACCAAATAGCTGAAGATTGGTTAGAAGCAAGCTTc > 8:18686/1‑41 (MQ=255) aCCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCCGCGCGATGTCGAGGGTTGTTGCTAGGCACtga < 8:117766/149‑1 (MQ=255) ccAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCCGCGCGATGTCGAGGGTTGTTGCTAGGCACtgat < 7:27229/149‑1 (MQ=255) aTAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCCGCGCGATGTCGAGGGTTGTTGCTAGGCACTGATGATa < 6:204863/149‑1 (MQ=255) gCTGATGATTTGTTAGAAGCTTGCTTCTAAAGGCTTGCTATTTGTTTTGGCATTCGTATGCATTCCTGGTCGCGTGTC‑AAAGGCGTTGCCGGCAAGGAGCGTTAGGTGAGCGCGATGTATAGGGTTGTTGGTATGAACTgattattgtg < 4:126180/149‑5 (MQ=255) ttAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCCGCGCGATGTCGAGGGTTGTTGCTAGGCACTGATGATAg > 2:250819/1‑135 (MQ=255) ttAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCCGCGCGATGTCGAGGGTTGTTGCTAGGCACTGATGATAg < 1:250819/135‑1 (MQ=255) gAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCCGCGCGATGTCGAGGGTTGTTGCTAGGCACTGATGATAGGGCATCGGGAGTCATAg > 8:284881/1‑149 (MQ=255) gcttgcttCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCCGCGCGATGTCGAGGGttgttg > 7:146039/1‑112 (MQ=255) gcttgcttCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCCGCGCGATGTCGAGGGttgttg < 8:146039/112‑1 (MQ=255) ttgcttCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCCGCGCGATGTCGAGGGTTGTTGCTAGGCACTGATGATAGGGCATCGGGAGTCATAGGTTTa > 5:145586/1‑149 (MQ=255) | CGCGTGGGGTTGTGGAAGTCAAAATTGAGCATAGATTTCTCTACTCCTTAAAAGTAGACCAGTCGTATATTTTTTGGT‑GAAATTTTTATTGCAGAAGCTCGTCGGCGCGCATTGCGCACCAAATAGCTGAAGATTGGTTAGAAGCTTGCTTCTAAAGGCAACCAAGTTGGTGTGGCATTCGTCTGCATTCCTGGTCCCGAGCC‑AAAGGCGTTGCCGCCAAGCAGCGTAAGCTCCGCGCGATGTCGAGGGTTGTTGCTAGGCACTGATGATAGGGCATCGGGAGTCATAGGTTTA > NC_002947/2841790‑2842083 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |