| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 289,944 | G→C | 9.8% | intergenic (+28/‑138) | oprE → / → PP_0235 | outer‑membrane porin E/peroxidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 289,944 | 0 | G | C | 9.8% | 203.2 / 13.2 | 72 | intergenic (+28/‑138) | oprE/PP_0235 | outer‑membrane porin E/peroxidase |
| Reads supporting (aligned to +/- strand): ref base G (30/34); new base C (2/5); total (32/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.46e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.93e-02 | |||||||||||
GCACTCTCAAAGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGCCCAT > NC_002947/289798‑290083 | gCACTCTCAAAGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGAt > 8:352757/1‑149 (MQ=255) ctctCAAAGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTACGCTGAAAAAGAAGCCTCGCCTGATGc < 1:191963/149‑1 (MQ=255) aaaGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCt > 5:30740/1‑149 (MQ=255) aaaGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCATCAGGCGAGGCt < 6:84725/149‑1 (MQ=255) aaGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCtt > 6:161395/1‑149 (MQ=255) aGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCATCAGGCGAGGCttc < 6:44782/149‑2 (MQ=255) ggCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCATCAGGCGAGGCttct < 7:2003/149‑3 (MQ=255) ggCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGc < 7:352757/149‑1 (MQ=255) ggCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCACCAGGCGAGGCttcttttt < 8:167444/147‑3 (MQ=255) gCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGcc < 6:30740/149‑1 (MQ=255) ttCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTg > 6:334354/1‑149 (MQ=255) cAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTg < 7:287933/147‑1 (MQ=255) aGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCa < 8:304172/148‑1 (MQ=255) aGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCa < 8:183956/148‑1 (MQ=255) gCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGa < 1:68574/149‑1 (MQ=255) ccTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGAt < 4:100043/149‑1 (MQ=255) cGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTta < 7:220168/148‑1 (MQ=255) tCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTatat > 3:335862/1‑149 (MQ=255) gtCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTAtttt > 7:182969/1‑149 (MQ=255) tACCGTGGTAGCGGCTAAAGCGCCCTGGACAAACACCAGACTCGCTTCATAGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTAGACTGATGAGAGGCTTTTTTGTGACTGCAGATTTATATGTATTTTGGt > 2:270858/1‑149 (MQ=255) tAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTataaat > 2:253984/1‑148 (MQ=255) cgAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGt > 6:211560/1‑149 (MQ=255) gAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGtt < 3:130549/149‑1 (MQ=255) aaaGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTAttt > 3:220997/1‑129 (MQ=255) aaaGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGtta < 6:198715/149‑1 (MQ=255) gcgcCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCAGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCATTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGttatt > 7:54797/1‑148 (MQ=255) gcCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCATCAGGCGAGGCttctttttca > 5:339952/1‑100 (MQ=38) gcCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCATCAGGCGAGGCttctttttca < 6:339952/104‑5 (MQ=38) gACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCTCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCtt < 5:161395/147‑1 (MQ=255) aCAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCttttt < 7:82757/149‑1 (MQ=255) aGACCAGAATCTCTTCATCGTGATCTACACTTACAACTTCCTGTAAGCAGTA‑GATGATAAAGAAGCCTCTCCTTATGCGAGGCTTTTTTGTGGCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGttt < 1:270858/149‑1 (MQ=255) cAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTaa > 6:214859/1‑149 (MQ=255) gACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATc < 4:20609/149‑1 (MQ=255) gACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATc > 1:223931/1‑149 (MQ=255) aCTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCg < 5:211560/149‑1 (MQ=255) cTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTg > 2:26306/1‑148 (MQ=255) ttCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTg > 1:196626/1‑147 (MQ=255) tCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAg > 7:602/1‑149 (MQ=255) cATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCa < 3:20582/147‑1 (MQ=255) cATCGTGAACTACACTTACAACTTCCTGTAAGACGTA‑GCTGAAAAAGAAGCCTCTCCTGATGCGATGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCa < 7:336658/147‑1 (MQ=255) aCTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGc > 6:140529/1‑70 (MQ=255) aCTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGc < 5:140529/70‑1 (MQ=255) cTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTataa > 5:87338/1‑98 (MQ=255) cTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTataa < 6:87338/98‑1 (MQ=255) ttACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATa > 8:172830/1‑149 (MQ=255) ttACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATa < 8:602/149‑1 (MQ=255) ttACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATa < 5:334354/149‑1 (MQ=255) aCAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTataa > 3:206165/1‑90 (MQ=255) aCAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTataa < 4:206165/90‑1 (MQ=255) tGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAg > 4:358662/1‑122 (MQ=255) tGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAg < 3:358662/122‑1 (MQ=255) aGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAAcccag < 1:26306/149‑1 (MQ=255) ccGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAAcccagcc < 7:172830/149‑1 (MQ=255) a‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCTGGCACATTGAACCCATACGGTACAGAAcccagcccag < 1:253984/148‑1 (MQ=255) gCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAg > 4:73589/1‑135 (MQ=255) gCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAg < 3:73589/135‑1 (MQ=255) cTGAAAAAGAAGCCTCGCCTGATGCGATGCTTTTTTGTGCCTGCATATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGa < 5:214859/148‑1 (MQ=255) tGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGc > 6:120561/1‑149 (MQ=255) tGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCAATACGGTACAGAACACAGCCAAGGAGc > 5:32692/1‑149 (MQ=255) gAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTTATCGATTGGAGGCAAATTGAACCCATAAGGTACTGAAacaagcccattag > 7:157670/1‑143 (MQ=255) gAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGcc > 6:21988/1‑149 (MQ=255) aaaaaGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGAAGGCACATTGAACACATACGGTACAGAACACAGCCCAGGAGCCg > 6:292871/1‑149 (MQ=255) aaaaaGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTATTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGTTACAGAACCCAGCCCAGGAg > 6:227268/1‑146 (MQ=255) aaaGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCa < 2:223931/149‑1 (MQ=255) agaagCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGc < 4:335862/149‑1 (MQ=255) aaaagCCTCGCATCAGGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGc > 7:42514/3‑149 (MQ=255) tccTCGCCTGATGCGTGGGTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAATTTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGCCCAt < 6:32692/148‑1 (MQ=255) gCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGCCCAt < 2:196626/149‑1 (MQ=255) cTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGCCCAt < 4:175717/147‑1 (MQ=255) cTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGCCCAt > 3:175717/1‑147 (MQ=255) tGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAAcc > 7:291954/1‑119 (MQ=255) tGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAAcc < 8:291954/119‑1 (MQ=255) | GCACTCTCAAAGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTA‑GCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGCCCAT > NC_002947/289798‑290083 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |