| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,540,058 | A→G | 5.3% | N249D (AAT→GAT) | PP_3127 → | exopolysaccharide transport protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,540,058 | 0 | A | G | 5.3% | 223.3 / 2.4 | 75 | N249D (AAT→GAT) | PP_3127 | exopolysaccharide transport protein |
| Reads supporting (aligned to +/- strand): ref base A (32/39); new base G (2/2); total (34/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.81e-01 | |||||||||||
CCACGCCAATGCCTTGCCCGAGCACCAGACCCTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGACCCGCTACAAGGACGCCCACCCGGATGTCGTGGCGGTCAAGCGC > NC_002947/3539916‑3540204 | ccACGCCAATGCCTTGCCCGAGCACCAGACCCTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCg < 1:317658/149‑1 (MQ=255)ccACGCCAATGCCTTGCCCGAGCACCAGACCCTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCg < 5:263872/149‑1 (MQ=255) cGCCAATGCCTTGCCCGAGCACCAGACCCTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCg > 1:368615/1‑146 (MQ=255) cGCCAATGCCTTGCCCGAGCACCAGACCCTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCg < 2:368615/146‑1 (MQ=255) cAATGCCTTGCCCGAGCACCAGACCCTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTg > 7:74225/1‑149 (MQ=255) aaTGCCTTGCCCGAGCACCAGACCCTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGc > 8:144270/1‑149 (MQ=255) cTTGCCCGAGCACCAGACCCTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGccacc > 4:48181/1‑148 (MQ=255) cGAGCACCAGACCCTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTg < 6:155794/149‑1 (MQ=255) gAGCACCAGACCCTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCGATGCCGGCCTTGCCACCAAGGtt < 8:3292/147‑1 (MQ=255) gAGCACCAGACCCTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCGATGCCGGCCTTGCCACCAAGGtt > 7:3292/1‑147 (MQ=255) aGCACCAGACCCTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGcca < 1:170629/138‑1 (MQ=255) aGCACCAGACCCTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGcca > 2:170629/1‑138 (MQ=255) cACCAGACCCTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGa < 3:48181/149‑1 (MQ=255) ccAGACCCTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGGTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCtt > 8:325365/1‑130 (MQ=255) ccAGACCCTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGGTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCtt < 7:325365/130‑1 (MQ=255) ccAGACCCTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCGATGCCGGCCTTGccac < 1:38068/135‑1 (MQ=255) ccAGACCCTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCGATGCAGGCCTTGccac > 2:38068/1‑135 (MQ=255) ccAGACCCTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAgg < 8:249758/149‑1 (MQ=255) ccAGACCCTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAgg > 8:23150/1‑149 (MQ=255) ccAGACCCTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAgg > 8:178915/1‑149 (MQ=255) ccAGACCCTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAgg < 3:924/149‑1 (MQ=255) ccTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCAccc > 6:322008/1‑149 (MQ=255) ccTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCAccc > 7:281462/1‑149 (MQ=255) cgcATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGcc < 1:352951/149‑1 (MQ=255) aTGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGACGCGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCaa > 1:263469/1‑149 (MQ=255) cATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTg > 3:309196/1‑149 (MQ=255) aTGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGc < 7:144270/149‑1 (MQ=255) tGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGCCCAACCCGTGCCGAc > 2:55163/1‑149 (MQ=255) tGTCGCGGGCGGAGCTGGAATTACGTGAGGTCGAC‑CGTGACTACAAGGCTGCAAAGGAAGAGCTGAGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCAACCAAGGTTGCCGAGGGATCCCGGCCAACCAGTGCCGAc > 2:60633/1‑149 (MQ=255) gTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGc > 3:358627/1‑144 (MQ=255) gTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGc < 4:358627/144‑1 (MQ=255) gcgggcggAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGc < 7:38418/149‑1 (MQ=255) gggcggAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGccc < 7:178915/149‑1 (MQ=255) aGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGAc < 3:246343/149‑1 (MQ=255) ggAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAgg < 6:25314/110‑1 (MQ=255) gAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAgg > 8:162208/1‑100 (MQ=255) gAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAgg < 7:162208/100‑1 (MQ=255) gAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGc < 1:100449/148‑1 (MQ=255) aTTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCaa < 6:181966/149‑1 (MQ=255) ccGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGc < 7:23150/148‑1 (MQ=255) cGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCt > 8:292457/1‑149 (MQ=255) cGTGAGGGCGAC‑CGGGACTACAAGGCTGCCCCGGAACACCTGCGCTACCTGGAACTGCAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCt < 6:375657/149‑1 (MQ=255) aGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGaaa < 8:74225/149‑1 (MQ=255) aGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGaaa < 4:309196/149‑1 (MQ=255) gAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCg < 5:25253/148‑1 (MQ=255) aC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGaa > 7:305205/1‑149 (MQ=255) cGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATa < 2:263469/149‑1 (MQ=255) aCTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATAcgcg < 8:305205/149‑1 (MQ=255) cAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGaaa < 5:86752/133‑1 (MQ=255) cAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGaaa > 6:86752/1‑133 (MQ=255) cAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCaa < 5:322008/148‑1 (MQ=255) ggCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAActgc > 7:283921/1‑149 (MQ=255) cTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAActgctg < 7:292457/149‑1 (MQ=255) tGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGa > 5:320873/1‑149 (MQ=255) cccAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGAcc < 8:281462/149‑1 (MQ=255) ccAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGAccc > 4:160270/1‑149 (MQ=255) cAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGACCCg > 1:349504/1‑149 (MQ=255) gAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGACCCGCTa > 7:39491/1‑149 (MQ=255) gCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGaaa > 2:172780/1‑115 (MQ=255) gCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGaaa < 1:172780/115‑1 (MQ=255) gCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGACCCGCTACAAg > 6:119946/1‑148 (MQ=255) ccTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAActgc < 3:170311/125‑1 (MQ=255) ccTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAActgc > 4:170311/1‑125 (MQ=255) ggAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGACCCGCTACAAGGAc > 3:354191/1‑139 (MQ=255) ggAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGACCCGCTACAAGGAc < 4:354191/139‑1 (MQ=255) aCTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGTCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCTACTGCTGACCCGCTACAAGGACGCCCACCCGGATg < 1:60633/149‑1 (MQ=255) aCTGGAGCTGGCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCTACTGCTGACCCGCTACAAGGACGCCCACCCGGATg < 1:55163/149‑1 (MQ=255) gAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGACCCGCTACAAGGACGCCCACCCGGATGTCGt < 8:283921/149‑1 (MQ=255) cTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGACCCGCTACAAGGACGCCCACCCGGATGTCGTGGc > 3:51363/1‑149 (MQ=255) cTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGACCCGCTACAAGGACGCCCACCCGGATGTCGTGGc < 8:39491/149‑1 (MQ=255) tCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGACCCGCTACAAGGACGCCCACCCGGATGTCGTGGCgg < 6:320873/148‑1 (MQ=255) tGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGACCCGCTACAAGGACGCCCACCCGGATGTCGTGGCGGTc > 7:31427/1‑148 (MQ=255) tGCGGCCAATGCCGGCCTTGCCACCAAGCTTGCCGAGGGCACACGGCCAACCCGTGCCGACCTGCCCGAAGACATGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGACCCGCTACAAGGACGCCCACCCCGATGTCTTGGAGGTc > 4:264061/1‑148 (MQ=255) gCGGCCACTGCCGGCCCTGCCACCAAGGGGGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATCCGCGCAACTGCTGACCCGCTACAAGGACGCCCACCCGCATGTCGTGGCGGTCaa < 8:31427/149‑1 (MQ=255) gCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGACCCGCTACAAGGACGCCCACCCGGATGTCGTGGCGGTc > 2:166840/1‑147 (MQ=255) aaTGCCGGCCTTGCAACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGACCCGCTACAAGGACGCCCACCCGGATGTCGTGGCGGTCAAgcgc > 3:58604/1‑147 (MQ=255) | CCACGCCAATGCCTTGCCCGAGCACCAGACCCTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGAC‑CGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGACCCGCTACAAGGACGCCCACCCGGATGTCGTGGCGGTCAAGCGC > NC_002947/3539916‑3540204 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |