Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,549,921 A→T 6.3% H418L (CAC→CTC) ‡ PP_3133 → oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,549,9210AT 6.3% 193.5 / 3.0 63H418L (CAC→CTC) ‡PP_3133oxidoreductase
Reads supporting (aligned to +/- strand):  ref base A (30/29);  new base T (2/2);  total (32/31)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01

TGCTTAGCGCCGAAGACCGGCACACCATCAAGTGCATTGGCAGCGAACTGGCCAAGCAGTTCGCCGACATGGACCTGGGGTTCGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCTGTATGTCGCCGGCAGCAGCATTTTTGCCAAGGGCGGCGCCTCCAACCCGACCATGCCGCTGT  >  NC_002947/3549774‑3550064
                                                                                                                                                    |                                                                                                                                               
tGCTTAGCGCCGAAGACCGGCACACCATCAAGTGCATTGGCAGCGAACTGGCCAAGCAGTTCGCCGACATGGACCTGGGGTTCGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATca                                                                                                                                                 >  2:366848/1‑148 (MQ=255)
    tAGCGCCGAAGACCGGCACACCATCAAGTGCATTGGCAGCGAACTGGCCAAGCAGTTCGCCGACATGGACCTGGGGTTCGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATgg                                                                                                                                            >  1:114400/1‑149 (MQ=255)
      gcgcCGAAGACCGGCACACCATCAAGTGCATTGGCAGCGAACTGGCCAAGCAGTTCGCCGACATGGACCTGGGGTTCGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGc                                                                                                                                          <  2:127640/149‑1 (MQ=255)
         ccGAAGACCGGCACACCATCAAGTGCATTGGCAGCGAACTGGCCAAGCAGTTCGCCGACATGGACCTGGGGTTCGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGcac                                                                                                                                        >  6:59560/1‑148 (MQ=255)
                 cGGCACCCCATCAAGTGCATTGGCAGCGAACTGGCCAAGCAGTTCGCCGACATGGACCTGGGGATCGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCCCTGCGAATGGCACCCCATGCCCATCACATGGGCACAAAGCGCAt                                                                                                                               >  5:308758/1‑149 (MQ=255)
                 cGGCACACCATCAAGTGCATTGGCAGCGAACTGGCCAAGCAGTTCGCCGACATGGACCTGGGGTTCGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCCCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCAt                                                                                                                               >  3:97357/1‑149 (MQ=255)
                     acacCATCAAGTGCATTGGCAGCGAACTGGCCAAGCAGTTCGCCGACATGGACCTGGGGTTCGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGgcc                                                                                                                           >  5:219704/1‑149 (MQ=255)
                       acCATCAAGTGCATTGGCAGCGAACTGGCCAAGCAGTTCGCCGACATGGACCTGGGGTTCGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGca                                                                                                                                         <  4:305087/133‑1 (MQ=255)
                       acCATCAAGTGCATTGGCAGCGAACTGGCCAAGCAGTTCGCCGACATGGACCTGGGGTTCGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGca                                                                                                                                         >  3:305087/1‑133 (MQ=255)
                       acCATCAAGTGCATTGGCAGCGAACTGGCCAAGCAGTTCGCCGACATGGACCTGGGGTTCGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGgccgc                                                                                                                         >  3:75656/1‑149 (MQ=255)
                                tGCATTGGCAGCGAACTGGCCAAGCAGTTCGCCGACATGGACCTGGGGTTCGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCa                                                                                                                <  5:59560/149‑1 (MQ=255)
                                      ggCAGCGAACTGGCCAAGCAGTTCGCCGACATGGACCTGGGGTTCGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCg                                                                                                           <  2:60365/148‑1 (MQ=255)
                                       gCAGCGAACTGGCCAAGCAGTTCGCCGACATGGACCTGGGGTTCGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGgt                                                                                                         <  3:309520/149‑1 (MQ=255)
                                             aaCTGGCCAAGCAGTTCGCCGACATGGACCTGGGGTTCGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTc                                                                                                   >  8:83170/1‑149 (MQ=255)
                                                   ccAAGCAGTTCGCCGACATGGACCTGGGGTTCGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGcc                                                                                             <  1:366848/149‑1 (MQ=255)
                                                    ctaGCAGTTAGCCGACCTGGACCTTGGGTTCGTCAAGCTCAACGAGTTCGTTTTCGAAACCT‑CTATACCTCTGAGAATGGCACCCGATGCCCATCACATGGGCACCACGCGCATGGCGGCCTCGCCGCAGTTCTGTGTgg                                                                                                     <  4:324002/138‑1 (MQ=255)
                                                    cAAGCAGTTCGCCGACATGGACCTGGGGTTCGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATGTGATGGGcatggg                                                                                                                                     <  6:48046/108‑5 (MQ=255)
                                                    cAAGCAGTTCGCCGACATGGACCTGGGGTTCGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATGTGATGGGcatggg                                                                                                                                     >  5:48046/1‑104 (MQ=255)
                                                    cAAGCAGTTCGCCGACATGGACCTGGGGTTCGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGcc                                                                                             >  5:1832/1‑148 (MQ=255)
                                                    cAAGCAGTTCGCCGACATGGACCTGGGGTTCGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACAGCTGAGAATGGAACCCCATGCCCATCACAAGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGAGTgg                                                                                                     >  3:324002/1‑140 (MQ=255)
                                                        cAGTTCGCCGACATGGACCTGGGGTTCGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTg                                                                                        <  2:114400/149‑1 (MQ=255)
                                                          gTTCGCCGACATGGACCTGGGGTTCGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGc                                                                                       >  2:165190/1‑148 (MQ=255)
                                                             cGCCGACATGGACCTGGGGTTCGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAg                                                                                    <  5:19055/148‑1 (MQ=255)
                                                                  aCATGGACCTGGGGTTCGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTc                                                                              <  6:1832/149‑1 (MQ=255)
                                                                         ccTGGGGTTCGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAg                                                                                    >  3:181238/1‑136 (MQ=255)
                                                                         ccTGGGGTTCGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAg                                                                                    <  4:181238/136‑1 (MQ=255)
                                                                                ttCGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCt                                                                <  7:83170/149‑1 (MQ=255)
                                                                                  cGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTTTTCGGTACCGAACACCtt                                                               <  3:370186/148‑2 (MQ=255)
                                                                                  cGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCTg                                                               <  3:281078/148‑1 (MQ=255)
                                                                                   gTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCTGt                                                              <  6:219704/148‑1 (MQ=255)
                                                                                   gTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCTGTa                                                             <  6:87100/149‑1 (MQ=255)
                                                                                      aaGCTCAACGATTTCGTTTACGACACCTGCGATACCGCTGAGAATGGCACCCCATGCCCATCAAATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAACCCTGTATg                                                           >  1:210679/1‑149 (MQ=255)
                                                                                          tCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCTGTATGTCGcc                                                      >  6:290069/1‑149 (MQ=255)
                                                                                            aaCGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTcgc                                                                                                                    >  7:14964/1‑85 (MQ=255)
                                                                                            aaCGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTcgc                                                                                                                    <  8:14964/85‑1 (MQ=255)
                                                                                            aaCGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCaa                                                                                     <  7:251791/116‑1 (MQ=255)
                                                                                            aaCGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCaa                                                                                     >  8:251791/1‑116 (MQ=255)
                                                                                                 tttCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCTGTATGTCGCCGgcagca                                               <  4:75656/149‑1 (MQ=255)
                                                                                                  ttagTTTACGACACCT‑CGATTCCTCTGAGTATGGCACCCCATGCCCATCAGATGGGCACCACGCGCATGTCCGCCTCGACTCAGTTCGGTGTGGTCGATGCCAATTGCTAGTTGTTCGTTACCGAAAACCTGTATGTCGGCGgcagca                                               <  2:312663/145‑1 (MQ=255)
                                                                                                     gTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCTGTATGTCGCCGGCAGCAGCAt                                           >  5:79064/1‑149 (MQ=255)
                                                                                                          ccacacCT‑CGATACGGCTGAGAATGGCACCCGATGCCCATGACCTCGGCTCGACGCGCATGGCCGCCTGGCCGCAGTTCGGTGTGGTCGATGCCAATTGCCAGGTGTTCGGTACCGAAAAGCTGTATGTCGCCGGCAGCTGCAttttt                                       <  4:97357/146‑1 (MQ=255)
                                                                                                           gACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCTGTATGTCGCCGGCAGCAGCATTTTTGc                                     >  4:200541/1‑149 (MQ=255)
                                                                                                              acCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGtt                                                                               >  4:235350/1‑104 (MQ=255)
                                                                                                              acCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGtt                                                                               <  3:235350/104‑1 (MQ=255)
                                                                                                               ccT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCTGt                                                              <  5:378734/120‑1 (MQ=255)
                                                                                                               ccT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCTGt                                                              >  6:378734/1‑120 (MQ=255)
                                                                                                                cT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCTGTATGTCGCCGGCAGCAGCATTTTTGCCAAgg                                >  6:160667/1‑149 (MQ=255)
                                                                                                                cT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCTGTATGTCGCCGGCAGCAGCATTTTTGCCAAgg                                >  2:173273/1‑149 (MQ=255)
                                                                                                                    gATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTGGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCTGTATGTCGCCGGCAGCAGCAttttt                                       <  7:122165/139‑1 (MQ=255)
                                                                                                                    gATACCGCTGAGAATGGCACCCCATCCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTAGGTACCGAAAACCTGTATGTCTCCGCCAGCAGCAttttt                                       >  8:122165/1‑139 (MQ=255)
                                                                                                                         cGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCTGTATGTCGCCGGCAGCAGCATTTTTGCCAAGGGCGGCGcc                        >  2:78683/1‑149 (MQ=255)
                                                                                                                          gCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCTGt                                                              <  3:70492/110‑1 (MQ=255)
                                                                                                                          gCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCTGt                                                              >  4:70492/1‑110 (MQ=255)
                                                                                                                          gCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCTGTATGTCGCCGGCAGCAGCATTTTTGCCAAGggcg                             <  5:63747/143‑1 (MQ=255)
                                                                                                                          gCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCTGTATGTCGCCGGCAGCAGCATTTTTGCCAAGggcg                             >  6:63747/1‑143 (MQ=255)
                                                                                                                           cTGAGAATGGCACCACATGCCCATCACATGGGCACCACGCTCATGGCCGCCTCGCCGCAGTTCGGAGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCTGTATGTCGCCGGCAGCAGCATTATTGCCAAGGGCGGCGCCTc                      >  5:323176/1‑149 (MQ=255)
                                                                                                                                    gCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCTGTATGTCGCCGGCAGCAGCATTTTTGCCAAGGGCGGCGCCTCCAACCCGAc             >  5:160718/1‑149 (MQ=255)
                                                                                                                                          ggtGCCCATGTGATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCTGTATGTCGCCGGCAGCAGCATTTTTGCCAAgg                                >  4:269029/3‑124 (MQ=255)
                                                                                                                                          ggtGCCCATGTGATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCTGTATGTCGCCGGCAGCAGCATTTTTGCCAAgg                                <  3:269029/122‑1 (MQ=255)
                                                                                                                                               ccATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCTGTATGTCGCCGGCAGCAGCATTTTTGCCAAGGGCGGCGCCTCCAACCCGACCATGCCGCTGt  >  1:265781/1‑149 (MQ=255)
                                                                                                                                               ccATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCTGTATGTCGCCGGCAGCAGCATTTTTGCCAAGGGCGGCGCCTCCAACCCGACCATGCCGCTGt  <  1:165190/149‑1 (MQ=255)
                                                                                                                                               ccATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCTGTATGTCGCCGGCAGCAGCATTTTTGCCAAGGGCGGCGCCTCCAACCCGACCATGCCGCTGt  <  2:210679/149‑1 (MQ=255)
                                                                                                                                                cATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCTGTATGTCGCCGGCAGCAGCATTTTTGCCAAGGGCGgcgc                         <  2:117506/125‑1 (MQ=255)
                                                                                                                                                cATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCTGTATGTCGCCGGCAGCAGCATTTTTGCCAAGGGCGgcgc                         >  1:117506/1‑125 (MQ=255)
                                                                                                                                                    |                                                                                                                                               
TGCTTAGCGCCGAAGACCGGCACACCATCAAGTGCATTGGCAGCGAACTGGCCAAGCAGTTCGCCGACATGGACCTGGGGTTCGTCAAGCTCAACGATTTCGTTTACGACACCT‑CGATACCGCTGAGAATGGCACCCCATGCCCATCACATGGGCACCACGCGCATGGCCGCCTCGCCGCAGTTCGGTGTGGTCGATGCCAATTGCAAGGTGTTCGGTACCGAAAACCTGTATGTCGCCGGCAGCAGCATTTTTGCCAAGGGCGGCGCCTCCAACCCGACCATGCCGCTGT  >  NC_002947/3549774‑3550064

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑