| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,755,634 | G→A | 7.0% | G359R (GGG→AGG) | PP_3319 → | GGDEF domain‑containing sensory box protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,755,634 | 0 | G | A | 7.0% | 251.5 / 7.1 | 86 | G359R (GGG→AGG) | PP_3319 | GGDEF domain‑containing sensory box protein |
| Reads supporting (aligned to +/- strand): ref base G (43/37); new base A (3/3); total (46/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.18e-01 | |||||||||||
TGACGGGCTGACGGGTTTGCTTAACCGCCTGTCTCTGGAAGACCGGCTTGTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGTTTGTCGTTCTGCTGACGGACCTGCTTCGTGACGAAGACGCTGTCC > NC_002947/3755492‑3755778 | tGACGGGCTGACGGGTTTGCTTAACCGCCTGTCTCTGGAAGACCGGCTTGTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCact < 3:320589/149‑1 (MQ=255) aCGGGCTGACGGGTTTGCTTAACCGCCTGTCTCTGGAAGACCGGCTTGTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCactac > 5:136565/1‑149 (MQ=255) gCTGACGGGTTTGCTTAACCGCCTGTCTCTGGAAGACCGGCTTGTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCg > 5:364260/1‑149 (MQ=255) gggTTTGCTTAACCGCCTGTCTCTGGAAGACCGGCTTGTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGAt > 6:118066/1‑148 (MQ=255) gggTTTGCTTAACCGCCTGTCTCTGGAAGACCGGCTTGTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATc < 7:293812/149‑1 (MQ=255) gTTTGCTTAACCGCCTGTCTCTGGAAGACCGGCTTGTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCaa < 3:176443/149‑1 (MQ=255) ttAACCGCCTGTCTCTGGAAGACCGGCTTGTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCt > 3:98119/1‑148 (MQ=255) ttAACCGCCTGTCTCTGGAAGACCGGCTTGTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCt > 3:263240/1‑148 (MQ=255) ttAACCGCCTGTCTCTGGAAGACCGGCTTGTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCt > 3:258308/1‑148 (MQ=255) ttAACCGCCTGTCTCTGGAAGACCGGCTTCTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCt > 8:125768/1‑148 (MQ=255) ccGCCTGTCTCTGGAAGACCGGCTTGTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATc > 8:210690/1‑148 (MQ=255) tctcTGGAAGACCGGCTTGTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTgg > 5:263698/1‑148 (MQ=255) ggAAGACCGGCTTGTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAgc > 2:294613/1‑149 (MQ=255) ggAAGACCGGCTTGTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGATGATCGAGGTGGCACAgc > 2:325833/1‑149 (MQ=255) tctgACCGGCTTGTCCAGGCGTGTCGAAGCACCCGTAAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGTATGTATTAAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAgc < 2:184478/145‑1 (MQ=255) gAAGACCGGCTTGTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAgcg > 7:205979/1‑149 (MQ=255) gAAGACCGGCTTGTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAgcg > 1:173248/1‑149 (MQ=255) gAAGACCGGCTTGTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAgc > 7:63038/1‑148 (MQ=255) gAAGACCGGCTTGTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGAAGATCTAGGTCGaacacc > 4:360275/1‑146 (MQ=255) aGACCGGCTTGTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTc > 8:48071/1‑115 (MQ=255) aGACCGGCTTGTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTc < 7:48071/115‑1 (MQ=255) aCCGGCTTGTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAgc > 1:184478/1‑144 (MQ=255) ccGGCTTGTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGa < 4:108685/149‑1 (MQ=255) cGGCTTGTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATc > 5:135929/1‑129 (MQ=255) cGGCTTGTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATc < 6:135929/129‑1 (MQ=255) cGGCTTGTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTAAACTGGCGGTAATGTACAAAAACATGGATGCATTCAAATCAATCAACAAATCAAACGGGCAATAC‑TAAGGCGATAAATTGAATATCCAGGTGGCAAAgccattaac > 2:331368/1‑142 (MQ=255) cTTGTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGAcc > 5:201219/1‑147 (MQ=255) gTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCcagc < 7:210690/148‑1 (MQ=255) gTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCcagc < 6:201219/148‑1 (MQ=255) gTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCcag > 5:354019/1‑147 (MQ=255) tCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCcagca < 6:136565/148‑1 (MQ=255) aGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑CTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGgtc > 7:198189/1‑149 (MQ=255) ggCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGgtcc < 5:118066/149‑1 (MQ=255) gcagcaGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGa < 5:128329/129‑1 (MQ=255) gcagcaGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGa > 6:128329/1‑129 (MQ=255) gcagcaGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCt > 2:126892/1‑149 (MQ=255) agcagcCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGa > 6:360034/1‑149 (MQ=255) ccttCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACcg < 5:92602/146‑1 (MQ=255) ccGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACcg > 2:140165/1‑149 (MQ=255) gTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACcgtc < 1:294613/149‑1 (MQ=255) tAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTa < 5:360034/149‑1 (MQ=255) tAAAGTTCAACTGGAGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCGATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTa < 4:98119/149‑1 (MQ=255) aaaGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCcagc < 1:53287/118‑1 (MQ=255) aaaGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCcagc > 2:53287/1‑118 (MQ=255) aaGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATg < 1:126892/149‑1 (MQ=255) gTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATggg > 2:73045/1‑149 (MQ=255) tCAACTTGCGGTAATGTACATAGACCTTGATGGATTCAAATCCATCAACGACTCCATCGTGCACTAC‑TTCGGCGATCAAGTGCTGATCGATGTGGCACAGCGATTGACACAGCAGGTCCTTCCTGCTGATACCGTCGTTCGTATGggc < 3:327843/148‑1 (MQ=255) aaCTGGCTGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGggcggc < 6:354019/149‑1 (MQ=255) aaCTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGggcgg < 1:73045/148‑1 (MQ=255) gCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGa < 1:140165/149‑1 (MQ=255) gCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGa < 4:263240/149‑1 (MQ=255) gCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGa < 4:258308/149‑1 (MQ=255) gCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑CTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGa < 8:198189/149‑1 (MQ=255) ggTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCAGGCACTACGATCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAg > 1:106535/1‑149 (MQ=255) ggTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCAGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGt > 7:268539/1‑149 (MQ=255) ggTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCAGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGt > 7:263574/1‑149 (MQ=255) gTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGtt > 7:226288/1‑149 (MQ=255) tCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGttt < 2:173248/149‑1 (MQ=255) tCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGttt < 7:125768/149‑1 (MQ=255) aTGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGTTTGt < 8:63038/149‑1 (MQ=255) aTGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGTTTGt < 1:331368/149‑1 (MQ=255) aCATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGTTTGTCGtt > 7:44185/1‑149 (MQ=255) aCATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCATGCGTATGGGCGGCGATGAGTTTGTCGtt > 3:366773/1‑149 (MQ=255) gACCTGGATGGATTCAAATCGATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTAGGGGCGGCGATGAGTTTGTCGTTctgct < 3:360275/149‑1 (MQ=255) gACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGTTTGTCGTTctgc < 6:364260/148‑1 (MQ=255) gatggatTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGTTTGTCGTTCTGCTGACg < 8:205979/147‑1 (MQ=255) gatggatTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCATGCGTATGGGCGGCGATGAGTTTGTCGTTCTGCTGACgg < 4:366773/148‑1 (MQ=255) atggatTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGTTTGTCGTTCTGCTGACGGAc > 2:186348/1‑149 (MQ=255) atTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGTTTg < 7:185225/128‑1 (MQ=255) atTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGTTTg > 8:185225/1‑128 (MQ=255) ttCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGTTTGTCGTTCTGCTGACGGACCTGCt > 7:50715/1‑149 (MQ=255) ttCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGAAGATCTAGGTGGAACACCTATAAAAAAAAAAAATAAGACCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGTTTGTCGTTCTGCTGACGGACATGCt > 8:211270/1‑149 (MQ=255) tCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGTTTGTCGTTCTGCTGACGGACCTGCtt > 5:197138/1‑149 (MQ=255) cAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGTTTGTCGTTCTGCTGACGGACCTGCtt < 1:325833/148‑1 (MQ=255) aaaTCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGAAGATCTAGGTGGAACAGCGATTGACACATCAAGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGTTTGTCGTTCTGCTGACGGTCCTGCTTCg > 6:349740/1‑149 (MQ=255) aaTCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGTTTGTCGTTCTGCTGACGGACCTGCTTCGt > 5:125257/1‑149 (MQ=255) tCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGTTTGTCGTTCTGCTGACGGACCTGCTTCGTGa > 1:21933/1‑149 (MQ=255) aTCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGTTTGTCGTTCTGCTGACGGACCTGCTTCGTGACg > 6:294413/1‑148 (MQ=255) tCAACGACTCCATCAGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGTTTGTCGTTCTGCTGACGGACCTGCTTCGTGACGaa < 2:106535/149‑1 (MQ=255) tCAACGACTCCATCAGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGTTTGTCGTTCTGCTGACGGACCTGCTTCGTGACGaa < 8:263574/149‑1 (MQ=255) tCAACGACTCCATCAGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGTTTGTCGTTCTGCTGACGGACCTGCTTCGTGACGaa < 8:268539/149‑1 (MQ=255) aCGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGTTTGTCGTTCTGCTGACGGACCTGCTTCGTGACGAAGAc > 6:192596/1‑149 (MQ=255) gACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGTTTGTCGTTCTGCTGACGGACCTGCTTCGTGACGAAGACGc < 8:50715/149‑1 (MQ=255) aCTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGTTTGTCGTTCTGCTGACGGACCTGCTTCGTGACGAAGACGCt < 6:263698/149‑1 (MQ=255) tCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGTTTGTCGTTCTGCTGACGGACCTGCTTCGTGACGAAGACGCTGt > 5:238065/1‑149 (MQ=255) cATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGTTTGTCGTTCTGCTGACGGACCTGCTTCGTGACGAAGACGCTGTcc > 4:48508/1‑149 (MQ=255) | TGACGGGCTGACGGGTTTGCTTAACCGCCTGTCTCTGGAAGACCGGCTTGTCCAGGCGTGTCGCAGCAGCCGTCAACGTAAAGTTCAACTGGCGGTCATGTACATCGACCTGGATGGATTCAAATCCATCAACGACTCCATCGGGCACTAC‑TTCGGCGATCAAGTGCTGATCGAGGTGGCACAGCGCTTGACCCAGCAGGTCCGTCCGGCTGATACCGTCGTGCGTATGGGCGGCGATGAGTTTGTCGTTCTGCTGACGGACCTGCTTCGTGACGAAGACGCTGTCC > NC_002947/3755492‑3755778 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |