| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,375,590 | A→C | 6.4% | intergenic (‑55/+55) | PP_5637 ← / ← PP_3851 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,375,590 | 0 | A | C | 6.4% | 227.7 / 7.7 | 78 | intergenic (‑55/+55) | PP_5637/PP_3851 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (33/40); new base C (2/3); total (35/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.66e-01 | |||||||||||
GACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCACCCGAAGCTGGTA‑ATCGGACACCACCTGAAACAGAGACTCGGCCAGCAGG > NC_002947/4375448‑4375738 | gtcccATATGCTCGCTGTGATGGTCGGCAATGTGGTCGTCCGCGGGGAGGGGCTGGTCTTTCCGTATGCGGTGTTTTGGCAAGGCCACGCCATGCTCGCGGCGCTCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGAt < 1:263328/147‑1 (MQ=255) aCCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATa > 8:302996/1‑148 (MQ=255) cccAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACa < 4:299479/149‑1 (MQ=255) ccAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAg > 4:115631/1‑149 (MQ=255) cAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGt < 7:89159/149‑1 (MQ=255) agagGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTa > 6:108808/1‑149 (MQ=255) agGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATc < 3:115631/149‑1 (MQ=255) gCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATCTTTATACAGTAttgg < 3:100263/149‑4 (MQ=255) tCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGta > 3:23453/1‑148 (MQ=255) tCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGta > 1:129686/1‑148 (MQ=255) tgtgATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAgat < 4:78453/149‑1 (MQ=255) aTGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAgatgcc > 3:155783/1‑148 (MQ=255) gTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAgatgccgatg < 5:64902/149‑1 (MQ=255) gCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGatgccgatgccg > 7:182342/1‑149 (MQ=255) ccAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATCTTTATACAGTAttg > 5:52183/1‑129 (MQ=255) ccAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATCTTTATACAGTAttg < 6:52183/131‑3 (MQ=255) cAATGTGGACGTCCGCGCTGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCAGGAATACTGTATAATGTTTCAGTATCGTATAGatgccgatgccgga < 8:199810/149‑3 (MQ=255) aTGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAgg < 7:91601/149‑1 (MQ=255) aCGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATCTTTATACAGTAttg > 3:119713/1‑120 (MQ=255) aCGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATCTTTATACAGTAttg < 4:119713/122‑3 (MQ=255) aCGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATc > 2:261617/1‑149 (MQ=255) ccGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGcc > 6:224646/1‑148 (MQ=255) ccGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGcc > 6:1472/1‑148 (MQ=255) cgcgGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATc < 4:23453/149‑1 (MQ=255) ggCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGAt > 7:310590/1‑148 (MQ=255) gACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGt < 1:261617/147‑1 (MQ=255) gACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTg > 3:307948/1‑148 (MQ=255) gACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGa < 5:108808/149‑1 (MQ=255) cTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAg < 8:182342/149‑1 (MQ=255) tttCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAgg > 1:243543/1‑149 (MQ=255) tCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAgg < 4:307948/147‑1 (MQ=255) cGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGc < 3:279627/148‑1 (MQ=255) gTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCgg < 7:134955/149‑1 (MQ=255) gTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCg > 2:197588/1‑148 (MQ=255) tAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATcagc < 7:335851/130‑1 (MQ=255) tAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATcagc > 8:335851/1‑130 (MQ=255) gCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAg < 8:310590/148‑1 (MQ=255) cTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCtt > 8:253458/1‑149 (MQ=255) gAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGc < 8:150787/149‑1 (MQ=255) aGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACa > 3:91263/1‑76 (MQ=255) aGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACa < 4:91263/76‑1 (MQ=255) aGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCtt < 4:155783/146‑1 (MQ=255) aGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGc < 2:129686/148‑1 (MQ=255) ggCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGcccc > 7:31095/1‑149 (MQ=255) cACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTg < 3:29353/149‑1 (MQ=255) cGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGc < 7:302996/149‑1 (MQ=255) gCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCa < 1:197588/149‑1 (MQ=255) aTGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAAt > 3:91909/1‑148 (MQ=255) aTGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATc < 2:243543/149‑1 (MQ=255) cTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCAcc < 8:31095/149‑1 (MQ=255) tCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAATATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCACATCAGTGAAGGGGCTGAAGCTCCTTCCCCCGCATCTTCGCAATCAccc > 6:18244/1‑149 (MQ=255) tCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCAccc > 5:73131/1‑149 (MQ=255) gcggcg‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATTCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGTGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCACCCg > 2:15318/1‑148 (MQ=255) cggcg‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCACCCGaa < 5:1472/149‑1 (MQ=255) cg‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCACCCGAAGCt > 3:8308/1‑149 (MQ=255) g‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCACCCGAAGCTg > 8:171239/1‑149 (MQ=255) gAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCACCCGAAGCTGGt > 8:279771/1‑148 (MQ=255) cGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCACCCGAAGCTGGTA‑ATc < 7:171239/149‑1 (MQ=255) gagaAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCACCCGAAGCTGGTA‑ATCg < 5:25206/149‑1 (MQ=255) gagaAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCACCCGAAGCTGGTA‑ATCg < 7:279771/149‑1 (MQ=255) gagaAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCACCCGAAGCTGGTA‑ATCg > 6:25206/1‑149 (MQ=255) aaggaagTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCACCCGAAGCTGGTA‑ATCGGa > 7:49278/1‑148 (MQ=255) ggaagTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCACCCGAAGCTGGTA‑ATCGGacac < 5:224646/149‑1 (MQ=255) ggaagTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCACCCGAAGCTGGTA‑ATCGGacac > 4:142991/1‑149 (MQ=255) agTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCACCCGAAGCTGGTA‑ATCGGAcaccac < 1:15318/149‑1 (MQ=255) tACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCACCCGAAGCTgg < 8:299329/133‑1 (MQ=255) tACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCAACCGAAGCTGGTAGATCGGaaagagca > 7:299329/1‑142 (MQ=255) aTGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCACCCGAAGCTGGTA‑ATCGGACACCACCTGaa < 7:253458/149‑1 (MQ=255) tGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCACCCGAAGCTGGTA‑ATCGGACACCACCTGaaa < 4:8308/149‑1 (MQ=255) tGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCACCCGAAGCTGGTA‑ATCGGACACCACCTGaaa < 6:73131/149‑1 (MQ=255) ggCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCACCCGAACCTGGTA‑ATCGGACACCACCTGaaa > 6:331068/1‑146 (MQ=255) gCACCAATAGTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCTGAAGCTCCTTGCCCCGCATCTTGGCAATCACCCGAAGCTGGTA‑ATCGGACACCACCTGAAACaga < 5:18244/149‑1 (MQ=255) aCCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCACCCGAAGCTGGTA‑ATCGGACACCACCTGAAACAgaga > 8:295381/1‑149 (MQ=255) cAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTgg > 4:311632/1‑104 (MQ=255) cAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTgg < 3:311632/104‑1 (MQ=255) aaTACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCACCCGAAGCTGGTA‑ATCGGACACCACCTGAAACAGAGACTc < 5:331068/149‑1 (MQ=255) cTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCACCCGAAGCTGGTA‑ATCGGACACCACCTGAAACAGAGACTCGGc < 3:142991/148‑1 (MQ=255) tGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCACCCGAAGCTGGTA‑ATCGGACACCACCTGAAACAGAGACTCGGCca > 2:125019/1‑149 (MQ=255) ataAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCACCCGAAGCTGGTA‑ATCGGACACCACCTGAAACAGAGACTCGGCcag > 3:240318/1‑147 (MQ=255) aaaGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCACCCGAAGCTGGTA‑ATCGGACACCACCTGAAACAGAGACTCGGCCAgcagg > 7:30168/1‑149 (MQ=255) | GACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCG‑TCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGATACAGTATCGTATAGATGCCGATGCCGCAGGGCAATCGCCGATCAGCAGATCAGTGAAGGGGCGGAAGCTCCTTGCCCCGCATCTTGGCAATCACCCGAAGCTGGTA‑ATCGGACACCACCTGAAACAGAGACTCGGCCAGCAGG > NC_002947/4375448‑4375738 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |