| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,541,841 | A→G | 5.1% | Q186Q (CAA→CAG) ‡ | nhaB → | Na(+)/H(+) antiporter NhaB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,541,841 | 0 | A | G | 5.1% | 235.4 / 2.5 | 78 | Q186Q (CAA→CAG) ‡ | nhaB | Na(+)/H(+) antiporter NhaB |
| Reads supporting (aligned to +/- strand): ref base A (36/38); new base G (2/2); total (38/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.01e-01 | |||||||||||
TCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGCGAGCCGCAGAACCTGCTGATCGGCCACGAGATGG > NC_002947/4541698‑4541986 | tCGGCGTTTCTATCCGCGTTTCTCGATGCCCTAACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGc > 1:232703/1‑149 (MQ=255) cGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACTTGCTGGTCGCt > 2:353390/1‑149 (MQ=255) gCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCa > 4:165/1‑149 (MQ=255) cGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACTTGCTGGTCGCTctc < 1:353390/149‑3 (MQ=255) ttCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTg > 8:305552/1‑149 (MQ=255) cTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGTGAG‑CGACTTGCTGGTCGCTCTccagt < 3:181641/148‑4 (MQ=255) ttgtggcgTTTCTGGATGCCCTGACCGTCACGGCGGTGATCTTCAGGGCTGGGGTCGGCTTATACGGGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCAc < 2:178908/144‑1 (MQ=255) aTCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCaa < 5:150163/133‑1 (MQ=255) aTCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCaa > 6:150163/1‑133 (MQ=255) tCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCg > 7:349093/1‑149 (MQ=255) tCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCg > 2:64599/1‑149 (MQ=255) cgcgTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCggg < 1:297563/149‑1 (MQ=255) cgcgTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCgg > 2:297563/1‑148 (MQ=255) gcgTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCAc > 1:178908/1‑144 (MQ=255) gcgTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCggg > 6:29446/1‑148 (MQ=255) cgTTTCTCGATGCGCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACGACCGCGTCGCGTCCGGGGCGAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGaa < 2:342806/149‑1 (MQ=255) cgTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGaa < 1:113193/149‑1 (MQ=255) tttCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGa > 2:301366/1‑149 (MQ=255) cGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCt < 4:69192/132‑1 (MQ=255) cGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑AGACCAGCAAGTCGCTCACCt > 3:69192/1‑132 (MQ=255) gATGCCCTGACCGTCACGGCGGTGATCATCTGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGa > 1:34104/1‑149 (MQ=255) gATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGaa < 8:134491/141‑1 (MQ=255) gATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGaa > 7:134491/1‑141 (MQ=255) gATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTc < 4:350317/147‑1 (MQ=255) gATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGa < 8:355029/149‑1 (MQ=255) ccTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGt > 7:334425/1‑149 (MQ=255) ccGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCcgc < 2:34104/149‑1 (MQ=255) ccGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCcgc < 7:305552/149‑1 (MQ=255) gTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGGGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCgcgc < 1:66708/149‑1 (MQ=255) ggcggTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTcc > 8:220997/1‑149 (MQ=255) atcaGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCAGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAACTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTCCGTAGCct > 4:18032/1‑149 (MQ=255) tGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCTACAAGTTCCGCGCCTTCATGCGTAGCCTGCTGATg > 6:205740/1‑148 (MQ=255) tGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATg > 6:302224/1‑148 (MQ=255) cGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGc < 2:82417/147‑1 (MQ=255) ggTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATg < 1:159129/149‑1 (MQ=255) gTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATgg < 8:334425/149‑1 (MQ=255) cGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGgcg > 5:218956/1‑149 (MQ=255) cTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCtg > 2:204512/1‑149 (MQ=255) cTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCtg > 2:305881/1‑149 (MQ=255) ttCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGTCGACCAGCAAGTCGCTCACCTGCCCCGGGAAGCCCTAGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGgcgcgg > 1:296275/1‑147 (MQ=255) cTACGCGGTGTACCACCGGGTCGCGTCGGGGGCCAATCGGCGCTAGGAAAGCGCACTGTATAG‑GGACCAGCAAGTCGCTTACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCtgtg < 1:301366/148‑1 (MQ=255) tACCCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATgg < 8:39514/140‑1 (MQ=255) gaCGCGGTGGTACACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCctgct > 1:15133/2‑131 (MQ=255) gaCGCGGTGGTACACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCctgct < 2:15133/130‑1 (MQ=255) gaCGCGGTGGTACACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTggg > 5:371266/2‑149 (MQ=255) tgtACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGcc < 6:218956/149‑1 (MQ=255) accaccGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTg > 7:293045/1‑149 (MQ=255) ccaccGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTgg < 8:334834/149‑1 (MQ=255) ccaccGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTgg < 5:29446/149‑1 (MQ=255) accGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGggc < 1:204512/149‑1 (MQ=255) accGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACATCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGggc < 5:205740/149‑1 (MQ=255) cgtcgcgtcCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGgcggcg < 1:64599/149‑1 (MQ=255) tcgcgtcCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCctg > 4:9111/1‑110 (MQ=255) tcgcgtcCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCctg < 3:9111/110‑1 (MQ=255) gcgtcCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGttt > 8:126802/1‑148 (MQ=255) gcgtcCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGttt < 7:126802/148‑1 (MQ=255) gcggcCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGttt < 2:232703/148‑1 (MQ=255) cgtcCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTg > 2:168836/1‑148 (MQ=255) tcCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCAc < 8:293045/149‑1 (MQ=255) gggCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTtg < 1:168836/149‑1 (MQ=255) gggCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTtg < 3:18032/149‑1 (MQ=255) cAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTtggtgg > 7:60322/1‑149 (MQ=255) cAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTtggtgg < 8:60322/149‑1 (MQ=255) cAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTtggtgg < 6:371266/149‑1 (MQ=255) cgcgcgAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGCGa < 7:220997/148‑1 (MQ=255) gcgcACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGCGAGCCGCAGAACctg < 1:305881/149‑1 (MQ=255) gcgcACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGCGAGCCGCAGAACctg > 2:64258/1‑149 (MQ=255) cgcACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGCGAGCCGCAGAACctgc < 2:296275/149‑1 (MQ=255) cgcACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGCGAGCCGCAGAACctgc < 5:302224/149‑1 (MQ=255) cACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCAGAAGCATGGCGCTGTCGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGCGAGCCGCAGACCctgct > 6:199641/1‑148 (MQ=255) gagaG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGCGAGCCGCAGAACCTGCTGATCgg > 3:282817/1‑149 (MQ=255) gag‑CGACTTGCTGGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGCGAGCCGCAGAACCTGCTGATCGGc > 2:196476/1‑148 (MQ=255) gag‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGCGAGCCGCAGAACCTGCTGATCGGcc < 3:165/149‑1 (MQ=255) ag‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGttt < 8:13822/109‑1 (MQ=255) ag‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGttt > 7:13822/1‑109 (MQ=255) gACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGCGAGCCGCAGAACCTGCTGATCGGCCAc > 5:210139/1‑147 (MQ=255) ccAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGCGAGCCGCAGAACCTGCTGATCGGCCAc > 2:197652/1‑145 (MQ=255) cAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGggcggc > 1:45877/1‑99 (MQ=255) cAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGggcggc < 2:45877/99‑1 (MQ=255) gCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGCGAGCCGCAGAACCTGCTGATCGGCCACGAGATgg > 6:13078/1‑149 (MQ=255) | TCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAG‑CGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGCGAGCCGCAGAACCTGCTGATCGGCCACGAGATGG > NC_002947/4541698‑4541986 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |