| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,654,886 | A→C | 5.4% | intergenic (+38/‑220) | aceA → / → PP_4118 | isocitrate lyase/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,654,886 | 0 | A | C | 5.4% | 238.7 / 2.1 | 74 | intergenic (+38/‑220) | aceA/PP_4118 | isocitrate lyase/membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (32/38); new base C (2/2); total (34/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.76e-01 | |||||||||||
GCAGGAAGTGGGCACTGGCTACTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGGC > NC_002947/4654740‑4655032 | gcagGAAGTGGGCACTGGCTACTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGaaa < 3:234170/149‑1 (MQ=255) gTGGGCACTGGCTACTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCgg < 7:49759/149‑1 (MQ=255) cACTGGCTACTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCtt > 8:304174/1‑149 (MQ=255) cTGGCTACTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTg < 1:316978/149‑1 (MQ=255) tGGCTACTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGt > 5:18914/1‑149 (MQ=255) gCTACTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGttt > 5:25240/1‑149 (MQ=255) tACTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGtt < 8:141400/146‑1 (MQ=255) tACTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGtt > 7:141400/1‑146 (MQ=255) gttCGACGACATGACCACCGTGATCGAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTa < 6:81295/147‑1 (MQ=255) cTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGCCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTAc > 5:9834/1‑149 (MQ=255) acgacATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTAccc > 3:197052/1‑146 (MQ=255) accaccGTGATCCAGGGCGTCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAgggc < 4:213748/148‑1 (MQ=255) tCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCctgctg > 4:107090/1‑149 (MQ=255) cAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGc > 4:13751/1‑149 (MQ=255) cAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGc < 3:33392/149‑1 (MQ=255) aGGGCGGCGCTTCGTCGGTGACTGCACTGGCCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGc > 8:120239/1‑148 (MQ=255) aGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGc > 2:229781/1‑148 (MQ=255) gcgcTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAAtttt < 4:197052/149‑1 (MQ=255) gcTGCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTa < 5:211862/149‑1 (MQ=255) tcgtcgGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAgggccgggc > 2:151001/1‑129 (MQ=255) tcgtcgGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAgggccgggc < 1:151001/129‑1 (MQ=255) gtcgGTGACTGCACTGACCGGTGCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAg < 8:165278/148‑1 (MQ=255) tcgGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGcc < 6:18914/149‑1 (MQ=255) gTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGtt > 4:115060/1‑149 (MQ=255) gTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGACCGGGCCTGCTGGCCAATTTTTACCAGCCGtt > 5:134033/1‑149 (MQ=255) gACTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCa > 8:186823/1‑149 (MQ=255) cTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTg > 6:17268/1‑95 (MQ=255) cTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCAcc < 6:25240/149‑1 (MQ=255) cTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGCGGCTTGTGAAAGCTCCGGGCCTTTg < 5:17268/95‑1 (MQ=255) tGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAg < 2:157983/110‑1 (MQ=255) tGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCATTTTTTACCAGCCGTTCACCg > 6:246900/1‑149 (MQ=255) cACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCg < 7:304174/147‑1 (MQ=255) aCTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGttt > 3:141559/1‑149 (MQ=255) gACCGGTTCGACCGAAGAAGAGCAGTGTCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTcc > 1:4332/1‑149 (MQ=255) cGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAgggc < 7:99365/104‑1 (MQ=255) cGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAgggc > 8:99365/1‑104 (MQ=255) ggTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCcgccgc < 3:310970/149‑1 (MQ=255) gTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTccgc < 6:236103/145‑1 (MQ=255) gTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTccgc > 5:236103/1‑145 (MQ=255) ttCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAg > 8:206229/1‑69 (MQ=255) ttCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAg < 7:206229/69‑1 (MQ=255) gACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTccgc < 6:75631/141‑1 (MQ=255) gACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTccgc > 5:75631/1‑141 (MQ=255) aagaagAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCATTTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTc < 5:246900/149‑1 (MQ=255) gaagaGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCTGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTa < 1:42842/113‑1 (MQ=255) gaagaGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTa > 2:42842/1‑113 (MQ=255) gaagaGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTcgc < 3:13751/149‑1 (MQ=255) gtgCATT‑TCCAGTGATAGTGGGTTGCCGTTGAACTAAGGCCAGGGGCTTTTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCGAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCgg < 7:131955/146‑1 (MQ=37) gagCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCggg < 6:9834/149‑1 (MQ=255) cAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTa > 6:46250/1‑148 (MQ=255) gT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAAc > 6:286248/1‑149 (MQ=255) t‑tCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAAcc > 4:104947/1‑149 (MQ=255) aCTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCa < 8:44548/149‑1 (MQ=255) gTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTacac < 7:186823/149‑1 (MQ=255) gTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTaca < 5:46250/148‑1 (MQ=255) tGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGGCTTTGTTTTTACCCGAGAAAGGGCCGGGACTGCTGGCCAATTTTTTCCAGCCGTTCACCGTTTCCGGCGCTACCGTATTCGCGGGTAAACCAGAAACTACACt > 3:252102/1‑149 (MQ=25) ccGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCgg < 3:115060/148‑1 (MQ=255) ccGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCgg < 5:286248/148‑1 (MQ=255) ctttGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGACTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGgga < 7:120239/147‑1 (MQ=255) gAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGggagga < 2:6711/148‑1 (MQ=255) aaCAAAGGCCCGGAGCTTTCACAAGCCCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTcgc < 1:41590/115‑1 (MQ=21) aaCAAAGGCCCGGAGCTTTCACAAGCCCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTcgc > 2:41590/1‑115 (MQ=21) aCAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGgaga > 7:215891/1‑148 (MQ=255) aaaGGCCCGTGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCgg < 2:99736/139‑1 (MQ=255) aaaGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCgg > 1:99736/1‑139 (MQ=255) aGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGggagga > 6:75868/1‑142 (MQ=255) aGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGggagga < 5:75868/142‑1 (MQ=255) ggCCCGGAGCTTTCACAAGCCCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGgga < 1:209924/138‑1 (MQ=21) ggCCCGGAGCTTTCACAAGCCCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGgga > 2:209924/1‑138 (MQ=21) ccGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCgg < 7:356233/108‑1 (MQ=255) ccGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCgg > 8:356233/1‑108 (MQ=255) gtgAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGggagg > 6:250019/1‑128 (MQ=255) gtgAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGggagg < 5:250019/128‑1 (MQ=255) tgAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGgc < 4:141559/149‑1 (MQ=255) tgAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGgc < 2:4332/149‑1 (MQ=255) | GCAGGAAGTGGGCACTGGCTACTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGT‑TCCACTGATAGTGGGTTGCCGTTGAACAAAGGCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGGC > NC_002947/4654740‑4655032 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |