| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,657,309 | C→T | 9.8% | intergenic (+24/‑56) | nuoB → / → nuoC | NADH‑quinone oxidoreductase subunit B/NADH‑quinone oxidoreductase subunit C/D |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,657,309 | 0 | C | T | 9.8% | 197.5 / 9.7 | 71 | intergenic (+24/‑56) | nuoB/nuoC | NADH‑quinone oxidoreductase subunit B/NADH‑quinone oxidoreductase subunit C/D |
| Reads supporting (aligned to +/- strand): ref base C (34/30); new base T (3/4); total (37/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.03e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.42e-01 | |||||||||||
CCCGCTTTCCTGGGTTGTTGGTGATCAAGGTATTTACCGTGCCGAGATGCCAGCCCAGAAAGACCTGCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACAACCGTTTTGGCGCCGATGCA > NC_002947/4657165‑4657457 | cccGCTTTCCTGGGTTGTTGGTGATCAAGGTATTTACCGTGCCGAGATGCCAGCCCAGAAAGACCTGCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAg < 7:258057/149‑1 (MQ=255) ccGCTTTCCTGGGTTGTTGGTGATCAAGGTATTTACCGTGCCGAGATGCCAGCCCAGAAAGACCTGCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAg > 5:289575/1‑148 (MQ=255) cGCTTTCCTGGGTTGTTGGTGATCAAGGTATTTACCGTGCCGAGATGCCAGCCCAGAAAGACCTGCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAg > 6:268654/1‑147 (MQ=255) cGCTTTCCTGGGTTGTTGGTGATCAAGGTATTTACCGTGCCGAGATGCCAGCCCAGAAAGACCTGCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGa < 5:268654/149‑1 (MQ=255) cTTTCCTGGGTTGTTGGTGATCAAGGTATTTACCGTGCCGAGATGCCAGCCCAGAAAGACCTGCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGc < 1:156001/149‑1 (MQ=255) ccTGGGTTGTTGGTGATCAAGGTATTTACCGTGCCGAGATGCCAGCCCAGAAAGACCTGCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCcgg < 8:265109/148‑1 (MQ=255) ccTGGGTTGTTGGTGATCAAGGTATTTACAGTGCCGAGATGCCAGCCCAGAAAGACCTGCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCcggc > 4:38505/1‑149 (MQ=255) ggTTGTTGGTGATCAAGGTATTTACCGTGCCGAGATGCCAGCCCAGAAAGACCTGCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCGGCTCCTTCGGGAGCGggcggca < 8:86653/149‑2 (MQ=255) ggTTGTTGGTGATCAAGGTATTTACCGTGCCGAGATGCCAGCCCAGAAAGACCTGCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCGGCTCCTTCGGGAGCGggcggca < 6:86327/149‑2 (MQ=255) ggTTGTTGGTGATCAAGGTATTTACCGTGCCGAGATGCCAGCCCAGAAAGACCTGCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCGGCTCCTTCGGGAGCGggcggc < 3:215637/148‑1 (MQ=255) gttgttGGTGATCAAGGTATTTACCGTGCCGAGATGCCAGCCCAGAAAGACCTGCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCt < 2:275975/149‑1 (MQ=255) gttgttGGTGATCAAGGTATTTACCGTGCCGAGATGCCAGCCCAGAAAGACCTGCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCt > 4:177660/1‑149 (MQ=255) ggTGATCAAGGTATTTACCGTGCCGAGATGCCAGCCCAGAAAGACCTGCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCtt > 7:274707/1‑148 (MQ=255) taTCAAGGGCTCTACCCTGCCGAGATGCAAGCCCAGAAAGACCGGCGTCGGGAGCTGCGCAGTGGAGTTACCAACCTGCGCAGGCCCGACGAAGTC‑TGATCCACC‑‑GACCTGCCGCCAGCTCCCGCTGGAGCCGGCGGCCTGGCTTCAtt < 8:189190/148‑1 (MQ=255) aTCAAGGTATTTACCGTGCCGAGATGCCAGCCCAGAAAGACCTGCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCAtt < 5:35804/148‑1 (MQ=255) cAAGGTATTTACCGTGCCGAGATGCCAGCCCAGAAAGACCTGCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCt > 4:136082/1‑148 (MQ=255) aaGGTATTTACCGTGCCGAGATGCCAGCCCAGAAAGACCTGCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCGGCTCCTTCGGGAgcgggcgg < 2:269361/133‑1 (MQ=255) aaGGTATTTACCGTGCCGAGATGCCAGCCCAGAAAGACCTGCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCGGCTCCTTCGGGAgcgggcgg > 1:269361/1‑133 (MQ=255) aGGTATTTACCGTGCCGAGATGCCAGCCCAGAAATACCTGCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCGTaa > 7:157158/1‑149 (MQ=255) aGGTATTTACCGTGCCGAGATGCCAGCCCAGAAAGACCTGCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTaa > 7:162123/1‑149 (MQ=255) aGGTATTTACCGTGCCGAGATGCCAGCCCAGAAAGACCTGCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTaa < 3:268341/149‑1 (MQ=255) aTTTACCGTGCCGAGATGCCAGCCCAGAAAGACCTGCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGtt > 4:321990/1‑149 (MQ=255) tACCGTGCCGAGATGCCAGCCCAGAAAGACCTGCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGa < 8:7609/148‑1 (MQ=255) aCCGTGCCGAGATGCCAGCCCAGAAAGACCTGCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGAcc > 7:270525/1‑149 (MQ=255) tGCCGAGATGCCAGCCCAGAAAGACCTGCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCaaa < 8:270525/149‑1 (MQ=255) gagaTGCCAGCCCAGAAAGACCTGCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAAc < 8:73584/134‑1 (MQ=255) gagaTGCCAGCCCAGAAAGACCTGCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAAc > 7:73584/1‑134 (MQ=255) gCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAAc > 1:90562/1‑149 (MQ=255) gCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAAc > 1:95410/1‑149 (MQ=255) tGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGCGAGACATGCCGCCCGCTCCCGAAGGAGCCGGCGGCATGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGCCCATGACAGCGGACAACGGTa > 1:287641/1‑149 (MQ=255) agcagcGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTAtttt < 3:38505/149‑1 (MQ=255) cagcGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCa < 3:172170/149‑1 (MQ=255) aTTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGc > 7:158398/1‑149 (MQ=255) aGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTa > 7:329376/1‑148 (MQ=255) gTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTAc > 5:164872/1‑148 (MQ=255) tAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGc > 6:219259/1‑142 (MQ=255) tAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGc < 5:219259/142‑1 (MQ=255) tAACCAACCTGCGCAGACCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACaa < 8:157158/149‑1 (MQ=255) aaccaaccTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACaa < 8:162123/148‑1 (MQ=255) accaaccTGCGCAGCCCCGACGAAGTCGTGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCATGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGc > 1:205071/1‑141 (MQ=255) accaaccTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGc < 2:205071/140‑1 (MQ=255) accaaccTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAgg > 1:77702/1‑149 (MQ=255) accaaccTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAgg > 2:163142/1‑149 (MQ=255) ccaaccTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGAcc < 3:391/102‑1 (MQ=255) ccaaccTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGAcc > 4:391/1‑102 (MQ=255) ccaaccTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGc < 2:77702/149‑1 (MQ=255) ccccGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGAt > 6:78785/1‑149 (MQ=255) cgacgaAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGAtgtg > 5:155421/1‑149 (MQ=255) cgacgaAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGAtgtg < 3:136082/149‑1 (MQ=255) cgacgaAGTC‑TGATCCAGC‑‑GACCTGACGCGCGGTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTATCGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACTAGGCCGACGACCacatcgtt < 2:287641/149‑8 (MQ=255) gacgaAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTATTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTACGCCCTACAAGGCTGACGACCAGGATGTgg > 6:53684/1‑149 (MQ=255) cgaAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGgtc < 3:321990/149‑1 (MQ=255) aGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGgtcgtc < 8:158398/149‑1 (MQ=255) gTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGtcgtcg < 6:289575/149‑1 (MQ=255) tGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAAc > 1:233065/1‑149 (MQ=255) gATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAAc < 4:71517/148‑1 (MQ=255) gATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAAc > 3:71517/1‑148 (MQ=255) aTCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACt > 1:220297/1‑148 (MQ=255) aTCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACt > 3:214092/1‑148 (MQ=255) tCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGa < 5:78785/149‑1 (MQ=255) cAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGgtc < 7:340812/137‑1 (MQ=255) cAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGgtc > 8:340812/1‑137 (MQ=255) aggccgccGGCTCCTTCGGGAGCGGGCGGCCTGGCTTCATTCTTACCGTTGCCCCAACGCGAGCGCGACCATGACAGCGGACAGCGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGAGGTGGTCGTCGAACTGAACAACCGtt > 1:19518/3‑149 (MQ=255) aggccgccGGCTCCTTCGGGAGCGGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACAACCGtt > 6:65881/3‑149 (MQ=255) gccgccCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACAACCGtttt > 7:22172/1‑149 (MQ=255) ccgcccgcTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACAACCGtttt < 8:329376/148‑1 (MQ=255) ccgcccgcTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACAACCGTTTTg > 1:354801/1‑149 (MQ=255) atcccatcTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGTCCCAAACCGTCCGACACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTTAACAACCGtttt < 2:330556/141‑1 (MQ=255) ccgcTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGAcc > 2:327246/1‑47 (MQ=255) ccgcTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGAcc < 1:327246/47‑1 (MQ=255) tCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACAACCGTTTTGGCGCCGAt > 3:47742/1‑149 (MQ=255) ccGAAGGAGCCGGCGTCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACAACCGtttt < 2:330555/138‑1 (MQ=255) ccGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACAACCGTTTTGGCGCCGAt < 8:274707/147‑1 (MQ=255) ccGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACAACCGTTTTGGCGCCGAt < 3:177660/147‑1 (MQ=255) cGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACAACCGTTTTGGCGCCGATGCa > 1:50055/1‑149 (MQ=255) cGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACAACCGTTTTGGCGCCGATGCa > 5:116751/1‑149 (MQ=255) | CCCGCTTTCCTGGGTTGTTGGTGATCAAGGTATTTACCGTGCCGAGATGCCAGCCCAGAAAGACCTGCGTCGTGAGCAGCGCATTGCAGTAACCAACCTGCGCAGCCCCGACGAAGTC‑TGATCCAGC‑‑GACCTGCCGCCCGCTCCCGAAGGAGCCGGCGGCCTGGCTTCATTCTTAACGTTGACCCAAAGCGACCGAGACCATGACAGCGGACAACGCTATTTTCATTCCGCCCTACAAGGCTGACGACCAGGATGTGGTCGTCGAACTGAACAACCGTTTTGGCGCCGATGCA > NC_002947/4657165‑4657457 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |