| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,750,014 | T→C | 5.4% | intergenic (+35/+37) | PP_4203 → / ← mqsA | ubiquinone oxidoreductase electron transfer flavoprotein/type II toxin‑antitoxin MqsRA system antitoxin/DNA‑binding transcriptional repressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,750,014 | 0 | T | C | 5.4% | 217.4 / 2.1 | 74 | intergenic (+35/+37) | PP_4203/mqsA | ubiquinone oxidoreductase electron transfer flavoprotein/type II toxin‑antitoxin MqsRA system antitoxin/DNA‑binding transcriptional repressor |
| Reads supporting (aligned to +/- strand): ref base T (34/35); new base C (2/2); total (36/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.66e-01 | |||||||||||
ACGCGCAGAACTGCGTGCACTGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGGAGAACGCA > NC_002947/4749870‑4750162 | aCGCGCAGAACTGCGTGCACTGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTtct > 2:119276/1‑148 (MQ=255) gcAGAACTGCGTGCACTGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCAt > 4:325675/1‑147 (MQ=255) gcAGAACTGCGTGCACTGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCAt > 3:297756/1‑147 (MQ=255) cAGAACTGCGTGCACTGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAg < 1:42630/149‑1 (MQ=255) cTGCGTGCACTGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCggg < 4:297756/149‑1 (MQ=255) tGCGTGCACTGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCgggg > 6:367377/1‑149 (MQ=255) gTGCACTGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTCGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATCAGCCGGGGGCt > 6:357368/1‑149 (MQ=255) aCTGCAAGACGTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCttttt < 2:104782/149‑1 (MQ=255) tGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTttgt > 2:16084/1‑149 (MQ=255) cAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTttgtt < 3:77343/148‑1 (MQ=255) gACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGa < 1:84243/128‑1 (MQ=255) gACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGa > 2:84243/1‑128 (MQ=255) gACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCt < 5:367377/149‑1 (MQ=255) cTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGCTCATGAGACCCGGGGGCTTTttg > 6:252229/1‑140 (MQ=38) cTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGCTCATGAGAACCGGGGGCTTTttg < 5:252229/140‑1 (MQ=38) tGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCa > 6:320226/1‑149 (MQ=255) cGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCAt > 6:106226/1‑148 (MQ=255) cGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAACC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCa < 5:247751/147‑1 (MQ=255) gACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGACCATGTAACGCCCCTGCCCTCGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTa < 5:266951/149‑1 (MQ=255) tCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAg > 2:209606/1‑149 (MQ=255) cAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAgg > 5:296096/1‑149 (MQ=255) aaGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCggg > 1:290818/1‑121 (MQ=255) aaGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCggg < 2:290818/121‑1 (MQ=255) aaGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGc < 7:22760/149‑1 (MQ=255) ggACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAg > 2:205863/1‑149 (MQ=255) aCCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCTGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGt > 4:41420/1‑148 (MQ=255) ccGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCAAGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACg > 6:76163/1‑149 (MQ=255) ggCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCa > 8:218975/1‑149 (MQ=255) ccAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTgg < 3:51014/123‑1 (MQ=255) ccAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTgg > 4:51014/1‑123 (MQ=255) ccAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACtt > 8:208934/1‑149 (MQ=255) ccAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGCTCATGAGAACCGGGGGCttttt < 6:222/118‑1 (MQ=37) ccAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGCTCATGAGAACCGGGGGCttttt > 5:222/1‑118 (MQ=37) aCATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCTAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCa < 5:357368/149‑1 (MQ=255) aTCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCTGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCaaa < 3:41420/149‑1 (MQ=255) aTCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCaaa < 6:296096/149‑1 (MQ=255) tCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAag < 1:16084/149‑1 (MQ=255) aCCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAagag > 8:22877/1‑149 (MQ=255) cTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAG‑‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGc < 5:270055/111‑1 (MQ=255) cTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAG‑‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGc > 6:270055/1‑111 (MQ=255) ggTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTc < 5:320226/147‑1 (MQ=255) tCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGa < 3:325675/149‑1 (MQ=255) aCCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCaaa > 1:215272/1‑137 (MQ=255) aCCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCaaa < 2:215272/137‑1 (MQ=255) cccTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGc > 7:259118/1‑149 (MQ=255) ccTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAgg < 8:275981/115‑1 (MQ=255) ccTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAgg > 7:275981/1‑115 (MQ=255) ccTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGc > 2:342006/1‑148 (MQ=255) gcgcTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCcagc < 1:342006/149‑1 (MQ=255) cgcTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCcagca < 7:218975/149‑1 (MQ=255) cGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGa < 7:22877/149‑1 (MQ=255) gCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAACCTTCTCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGa < 1:119276/149‑1 (MQ=255) ccGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAg > 7:341128/1‑149 (MQ=255) aCTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTc > 6:372056/1‑149 (MQ=255) tCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCAcc > 8:165165/1‑148 (MQ=255) cGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAAc > 2:296340/1‑149 (MQ=255) cGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAAc > 5:302169/1‑149 (MQ=255) gAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCAccccgc > 3:51301/1‑145 (MQ=255) aGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGc < 5:76163/148‑1 (MQ=255) gCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCggg < 1:205863/149‑1 (MQ=255) gCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACC‑CCGCCAGTGGCgttg < 4:51301/149‑4 (MQ=255) ccccTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCgggg > 7:248371/1‑149 (MQ=255) tGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGggtggt > 4:196493/1‑149 (MQ=255) cGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCg < 8:341128/148‑1 (MQ=255) ggCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGtt < 7:165165/149‑1 (MQ=255) gCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGttt < 3:196493/149‑1 (MQ=255) caacaaAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGtttt < 8:248371/149‑1 (MQ=255) acaaAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATgg < 8:61158/89‑1 (MQ=255) acaaAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATgg > 7:61158/1‑89 (MQ=255) acaaAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCa < 6:302169/149‑1 (MQ=255) aaaaaGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCAt > 6:189650/1‑148 (MQ=255) aaGC‑‑C‑CCCGGGTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACg < 8:259118/149‑1 (MQ=255) aGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACgg < 1:209606/149‑1 (MQ=255) aGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACgg < 5:189650/149‑1 (MQ=255) ttCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGGAGAACGCa > 3:86648/1‑149 (MQ=255) | ACGCGCAGAACTGCGTGCACTGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGC‑‑C‑CCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGGAGAACGCA > NC_002947/4749870‑4750162 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |