New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2086250 | NA (NA) | 6 (0.250) | 6/274 | 2.3 | NA | coding (365/1302 nt) | PP_1865 | transposase |
? | NC_002947 | = 2086296 | NA (NA) | coding (411/1302 nt) | PP_1865 | transposase |
AGATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2086097‑2086250 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgaaaaCCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTG < NC_002947/2086296‑2086150 AGATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTAC < 3:86417/148‑1 GATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTAC > 1:83022/1‑147 TCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCG > 1:84502/1‑147 GTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAA > 1:149159/1‑148 GTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAA < 4:86854/148‑1 GTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAA < 7:69201/148‑1 GTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGACAGACTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAA > 5:115986/1‑148 CCGAACCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAACCCGGG > 1:74087/1‑148 GTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAACCCGGGGCGAGCCGCTCCGCGCTC > 6:103682/1‑148 TTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGG < 5:66051/148‑1 GCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTA < 5:103682/147‑1 CGCCGACAAGCCATGAGGTCGGCTGCTCAGCCATGCGTCCTGCTTGGCAAGTTCGGGGGGGCGATGGCAGCCACTTGGCCGCTACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGA < 7:35880/148‑1 GCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAG < 2:74087/148‑1 ACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGC > 2:59344/1‑146 ACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATG < 4:36464/114‑1 GAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGC < 8:108110/148‑1 ACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCACCTCATGGATTGTCGGCGCCAAGCGCTG > 1:64614/1‑148 AGATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2086097‑2086250 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgaaaaCCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTG < NC_002947/2086296‑2086150 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |